BGIOSGA033281

From RiceWiki
Revision as of 05:08, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA033281| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA033281, complete gene.| tag = OS10G05...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA033281

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA033281, complete gene.

LocusTag

OS10G0516800

Ensembl Transcript ID

BGIOSGA033281-TA

Ensembl Protein ID

BGIOSGA033281-PA

Length

5222

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:18921422..18926643

Sequence Coding Region

18921422..18921835,18921954..18922322,18923310..18923403,18923486..18923523,18924119..18924265
,18924928..18925027,18925134..18926092,18926491..18926643

Genome Context

<gbrowseImage1> name=IndicaChromosome10:18921422..18926643 source=RiceIndica10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome10:18921422..18926643 source=RiceIndica10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAAATTCAGAAGTCTGATCATCATGAGCAGAATCTTACTTCACCAAGAGGGCTAATCCATAAAGTGCTGCGTCGCACAAGTAGCAGGCGTTCTCCAACTGCAGCAGACCATAACCCTTCTCCTGTATTCCTGGAGACAAGCAATTCAAAATTCTTAAAGCAAAAGGATATTGATGATGCCATCAAGGATCCAGAGAAGGCAGGCACACACGACAACAGAATTGAAGATGAGAAGTCTGATTTGTTAGGGTATGAAATTTGTTCTGGGAAGCTTACATTGGATAACAAAGCCAAAAGTGCATCAGGTGAACAGTCTGGATCAGGGTCCAGTAGCAATTGCTTTGATGCTAGACTCACTACTGAAGCCTTGGTATGGGGTTCTAATATCCTTAAGCTCGAGGACATTGTATCTGTATCATATCATTCCGGGCTCCGTCACTTCACTGTGCATGCATGCCCTCTTGAAAAAAGATCCAGTGGACTTTCCTGCTTTATGAAGCCTAGAAAAATTCAAAAGGACTTACGTTTCCTATCCACTTCTCCACACGAGGCTTTTCGGTGGGTTAATGGTTTTGCAGATCAACAATGCTATGTAAATCTATTACCTCACCCCATGGCATCTAGCAAGAAGCATTCATCTGAACTCATTCCATTTGATAATATGTTTGATCCATGTGTTAAATGCCGGTCTCCCCCAAAGATACTTGTCATCTTGAATCCTCGATCTGGACATGGTAGATCTAGCAAAGTTTTCCACGGAAAAGTGGAACCTATATTCAAGCTTGCAGGTTTCAAGATGGAAGTGGTCAAAACTACACATGCTGGTCATGCAAAATCTCTTGTATCAACAATAGATTTCAGTACCTGTCCAGATGGAATTGTATGTGTGGGTGGCGATGGGATTGTTAATGAGGTTCTCAATGGTCTCCTTTGTAGAGATGATCAAAATGTGGCTGTATCTGTTCCAATTGGTATAATACCAGCAGGGTCCGATAACTCACTTGTTTGGACAGTATTGGGTGTTAAAGATCCGATTTCTGCAGCAATGTCAATTGTCAGGGGAGGTTTTACACCCATTGATGTTTTTGCCGTTGAATGGATTCAAAGTGGGACTATCCATTTTGGCACAACAGTGTCATATTTTGGTTTTGTTAGTGATGTTCTTGAACTCTCAGAGAGATACCAGAAGCGTTTTGGTCCTCTCCGTTACTTTGTAGCCGGTTTTCTGAAATTCTTGTGCTTGCCAAAGTATAGCTTTGAATTGGAGTATCTTCCAATATCAGATGGTGGTGGTGGTGAGCATAAAATTGTGGAAGGGCAAGATAAAGTTGATGCATCAGACCTCTATGATGATGTAGTTCGGAGGTCGCGAGTAGAATGTCTACCTCGTGCCTCAAGTTTATCTAGCATTGATTCAATCATGTCTACAGGAATAATGTCAGGTGGAGATCTAGAGGTTTCGAGTCCACATGCTAATAATGAACCCTCTGAACTTGTTCGTGCACTTGACCCAAAATCAAAGCGCCTATCATTAGGGAGAACAAGTACTTTCAAAGAACCAGAAGAAGTGATCCATCCTCAGGCTCATGTTTCATCGACTCCCAACTGGCGTAGATCCAAATCGAAATCAAGGACAGAAAAGGCATGGCCAGGCGCGGGTGCTACAAATGATGCAAATTCCTCTCGTGGTACCACAACACATGACAAAGAAGACGCCTCCTCCACAATTTCAGATCCTGGGCCTGTGTGGGATTCAGGACCCAAGTGGGATGATGAGCCTAAATGGGATAATCAACCTAACTGGGAACCAGAGACTCCCATTGACTTACCTGGTCCATTGGATGATATTGAACTTGGTCTGACTAAGGAACTAGTCCCAAGCTTAGATGAAAGATGGACAGTTAGGAAGGGGCGGTATCTTGGTGTACTGGTATGCAACCATTCATGCAAGACTGTGCAGAGTTTAAGCTCTCAGGTTATTGCTCCTAAGGCTGAATACGATGACAATTGCCTGGACCTACTGTTGGTTGGTGGAAGTGGGAGGTTGAGGTTACTGAAATTTTTGGTGCTTTTGCAGTTTGGAAAGCATATTTCTCTTCCCAATGTGGAATATCTGAAGGTTAAGTCTGTGAGGCTCAAGGCTGGGCCCAACACACATGATGGATGTGGTATTGATGGTGAACTATTGCATGTCAAGGGGCAAGTTCGATGCAGTTTGCTGCCTCAGCAATGTCGATTAATCGGCAGGCCAGCCAAAAATCCTGTACAGTAG</cdnaseq>

Protein Sequence

<aaseq>MEIQKSDHHEQNLTSPRGLIHKVLRRTSSRRSPTAADHNPSPVFLETSNSKFLKQKDIDDAIKDPEKAGTHDNRIEDEKSDLLGYEICSGKLTLDNKAKSASGEQSGSGSSSNCFDARLTTEALVWGSNILKLEDIVSVSYHSGLRHFTVHACPLEKRSSGLSCFMKPRKIQKDLRFLSTSPHEAFRWVNGFADQQCYVNLLPHPMASSKKHSSELIPFDNMFDPCVKCRSPPKILVILNPRSGHGRSSKVFHGKVEPIFKLAGFKMEVVKTTHAGHAKSLVSTIDFSTCPDGIVCVGGDGIVNEVLNGLLCRDDQNVAVSVPIGIIPAGSDNSLVWTVLGVKDPISAAMSIVRGGFTPIDVFAVEWIQSGTIHFGTTVSYFGFVSDVLELSERYQKRFGPLRYFVAGFLKFLCLPKYSFELEYLPISDGGGGEHKIVEGQDKVDASDLYDDVVRRSRVECLPRASSLSSIDSIMSTGIMSGGDLEVSSPHANNEPSELVRALDPKSKRLSLGRTSTFKEPEEVIHPQAHVSSTPNWRRSKSKSRTEKAWPGAGATNDANSSRGTTTHDKEDASSTISDPGPVWDSGPKWDDEPKWDNQPNWEPETPIDLPGPLDDIELGLTKELVPSLDERWTVRKGRYLGVLVCNHSCKTVQSLSSQVIAPKAEYDDNCLDLLLVGGSGRLRLLKFLVLLQFGKHISLPNVEYLKVKSVRLKAGPNTHDGCGIDGELLHVKGQVRCSLLPQQCRLIGRPAKNPVQ</aaseq>

Gene Sequence

<dnaseqindica>1..414#533..901#1889..1982#2065..2102#2698..2844#3507..3606#3713..4671#5070..5222#ATGGAAATTCAGAAGTCTGATCATCATGAGCAGAATCTTACTTCACCAAGAGGGCTAATCCATAAAGTGCTGCGTCGCACAAGTAGCAGGCGTTCTCCAACTGCAGCAGACCATAACCCTTCTCCTGTATTCCTGGAGACAAGCAATTCAAAATTCTTAAAGCAAAAGGATATTGATGATGCCATCAAGGATCCAGAGAAGGCAGGCACACACGACAACAGAATTGAAGATGAGAAGTCTGATTTGTTAGGGTATGAAATTTGTTCTGGGAAGCTTACATTGGATAACAAAGCCAAAAGTGCATCAGGTGAACAGTCTGGATCAGGGTCCAGTAGCAATTGCTTTGATGCTAGACTCACTACTGAAGCCTTGGTATGGGGTTCTAATATCCTTAAGCTCGAGGACATTGTATCTGTAAGTTTTTAGCTCATTGACTTTATTCTGTAAATTGCGTTGGTATGTTTCTGAGTTTCACTGCAAGTCCACATCATGTGAGAGCAATTCTAAGATCTTTTCAACTTTAACATTGCAGGTATCATATCATTCCGGGCTCCGTCACTTCACTGTGCATGCATGCCCTCTTGAAAAAAGATCCAGTGGACTTTCCTGCTTTATGAAGCCTAGAAAAATTCAAAAGGACTTACGTTTCCTATCCACTTCTCCACACGAGGCTTTTCGGTGGGTTAATGGTTTTGCAGATCAACAATGCTATGTAAATCTATTACCTCACCCCATGGCATCTAGCAAGAAGCATTCATCTGAACTCATTCCATTTGATAATATGTTTGATCCATGTGTTAAATGCCGGTCTCCCCCAAAGATACTTGTCATCTTGAATCCTCGATCTGGACATGGTAGATCTAGCAAAGTTTTCCACGGAAAAGTGGAACCTATATTCAAGGTATGTCTAGATGAATAGAATCATGTGCATTATTTTATAATCAGAGCTGTGATGTCTGCCTCATCAACTCTTAAGCATGTTTGCAGCATTAGATATGGTCATATAGTCATTACATAACTTTAAAAAAAATGTTGCAATGAGTGTCTTTCATGTTTCCTTATTTACCATTGACATTGGTTACCGATAAAAATGCAAGTCATATACCTAATCGTGTTGACCTTTTTATTTGTAGTAATAGTAAGATGCTAACTTTGCATAGGTAGACGAAAAGGCACGAACTGTTTCTTTATTATGTTCCTTGATCCATCTCCATAAAAATGAATTCGTTTGTAGTAGAGGACCATATCACTATTCATGTTGTCAGTATCTTACCAAGATGAGCTTCTCTATGTATAAATTCATGTTTGAGTTCATATTGTGCCCTAAGAATCATCTCTCCTGTTGAACTGGAGCATGCTTTGCTATCCATTTGTTGCCAGGAGCCATTTTGAAGGTTCTCTGGCTCTAGTAGTTCACATTATCTGTCAAGGTCCGCTGGTTGGTATGATTGATATGTTTGAAATGTTCCTGAACTTTAAGGGATTTTAAATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGCTGTGTGTCTGTAGCTGTTGTATCCTTTCATCCAGTCTATTTGAATCAAGATATTGGTATTACATAGACACGTGTGATGGAGTAATATCTTGATACACTGTTGTCTCTACTGCGTTACATATCAATCTTGCTGCTTCTAGTGCCATGCCTTGAAGATTATTTCTGCCATGTCCTATCATCTCTGTAATGCTGAATTTATTAGGGATGAAAATTCGGCATCACTATAGTCTGACATAAGTGAGCATTCAATTGTATGGAAATACTCATCTTATCATTCCAGAGCAAAACAACTTGTTTTCAGTGTATCATGTGGTTGTGCTTGTTTTTATAACAATAATAAGTGCCGGTGACAGCTTGCAGGTTTCAAGATGGAAGTGGTCAAAACTACACATGCTGGTCATGCAAAATCTCTTGTATCAACAATAGATTTCAGTACCTGTCCAGATGGTATATATATCTTTACATCTTACCTGAAGTGTTCTACATAACTATTTTGATCATCTGATTCATGTTTGTGCCTGTCTTCTAGGAATTGTATGTGTGGGTGGCGATGGGATTGTTAATGAGGTTAGTCTATGTTAATTTCATGCATGATTTTTTTATGTTTCCTCATCTTATTTTTAATGTGTTTGGTATACCAACTAGAGAAGGTAATCTTTTATGACAACATTACCGATCACAGTTTCTTAAATTGCCTTAGCTTTTCTGAAGTTTTGATCTGTTATATCAAGAACAAATAGGATATACCTATATAAACTGCTGAAAATTGCTTGAAGTTTCGCAACTTTGTTCTGAAACCAACCTTCTACTTCCTCAGCCTGAACTGTTTCAGGGGGAAACTACTAAGTTCAAGAAGCTTCTCCCAGGGATCAGCAGATTTGTATATTGTAATATTTTACTTTGTTATTCACAATTTTGGAGTTCATTAAACAACTGGTTGTCGAACCCACAAAACCTTCAAATCATTTTCAGTGACGCTGCTAACCTAGAATGGTTATCACATGAGGGCTGTTAATGCTTACTTCTCAAAACCTATGTACTTCTATGAACACTAGACCATGTTTGTCTTCCACTTTCTGAAGCCATCCTCTCCTTGCATGTCACTATAAAATGCTCATTTGTCAACTACAGGTTCTGATGCATTAATAAATTCATTTTGTAGGTTCTCAATGGTCTCCTTTGTAGAGATGATCAAAATGTGGCTGTATCTGTTCCAATTGGTATAATACCAGCAGGGTCCGATAACTCACTTGTTTGGACAGTATTGGGTGTTAAAGATCCGATTTCTGCAGCAATGTCAATTGTCAGGGTAAACATCATTATATTGTTTCAGTATTTATGGTTTTCTATATACGTGTCACATGATTTATTGATTCAGTACTAGGCATCAAAGAAATTAAATGTTATTGATGATGCTGGATATGATACCAGCTCTTGAGTTACTAGCTATCATGACTCTTTACTCTTTGTTGCCAACCATGTGTTCACACTGCTTTGCTCTAGTTGGACCCTGGGGATGTGGAATTGTTGGCCAGGCCTGTACTGATATTTCTAGATCTGCTTATTGTACTCCATTAACTAGCCATCCTAGTATGCCACAGTAGTAGGCTAGCTCAACTTATGTCAAAGGGGGCTTCTGTCACCAGGTGCAGTCGAGCAGTTCTGAAAGTACACAGAAGTCATGCTGATTTTTTTTCTTAGAGAATCCATCATTTGAAACCATTGTTCTGGCAAGAATTAGTTTGAACACTGAAGGTAGAATCGTGTATGAAAGTTTACATGCTGCTTTTCAAGAAAATGTAGCAGGGCACTGAAAGTCTGTGAAGCATACAAATTAGTCAAGAGTTCTGCTGTGTACTAGTTTAGCTGTCTAACGTAGACCGAGTTAATTATTGCCCTCACAATTTTGTGTCAGCATTTTTTTCTTTTTTGTTTCACATCAATGTTTGTTAAACTGTTCATTGCTTGCAGGGAGGTTTTACACCCATTGATGTTTTTGCCGTTGAATGGATTCAAAGTGGGACTATCCATTTTGGCACAACAGTGTCATATTTTGGTTTTGTTAGTGATGGTAACCACATAATTGACATTTCAGACCATTTTCTTTTCCTGTTGGATCAATATTAATTCTTTTTTGAAATGGAAGCAGAAAATCTGACTATTTGTTTCTATTGCAGTTCTTGAACTCTCAGAGAGATACCAGAAGCGTTTTGGTCCTCTCCGTTACTTTGTAGCCGGTTTTCTGAAATTCTTGTGCTTGCCAAAGTATAGCTTTGAATTGGAGTATCTTCCAATATCAGATGGTGGTGGTGGTGAGCATAAAATTGTGGAAGGGCAAGATAAAGTTGATGCATCAGACCTCTATGATGATGTAGTTCGGAGGTCGCGAGTAGAATGTCTACCTCGTGCCTCAAGTTTATCTAGCATTGATTCAATCATGTCTACAGGAATAATGTCAGGTGGAGATCTAGAGGTTTCGAGTCCACATGCTAATAATGAACCCTCTGAACTTGTTCGTGCACTTGACCCAAAATCAAAGCGCCTATCATTAGGGAGAACAAGTACTTTCAAAGAACCAGAAGAAGTGATCCATCCTCAGGCTCATGTTTCATCGACTCCCAACTGGCGTAGATCCAAATCGAAATCAAGGACAGAAAAGGCATGGCCAGGCGCGGGTGCTACAAATGATGCAAATTCCTCTCGTGGTACCACAACACATGACAAAGAAGACGCCTCCTCCACAATTTCAGATCCTGGGCCTGTGTGGGATTCAGGACCCAAGTGGGATGATGAGCCTAAATGGGATAATCAACCTAACTGGGAACCAGAGACTCCCATTGACTTACCTGGTCCATTGGATGATATTGAACTTGGTCTGACTAAGGAACTAGTCCCAAGCTTAGATGAAAGATGGACAGTTAGGAAGGGGCGGTATCTTGGTGTACTGGTATGCAACCATTCATGCAAGACTGTGCAGAGTTTAAGCTCTCAGGTTATTGCTCCTAAGGCTGAATACGATGACAATTGCCTGGACCTACTGTTGGTTGGTGGAAGTGGGAGGTTGAGGTTACTGAAATTTTTGGTGCTTTTGCAGTTTGGAAAGCATATTTCTCTTCCCAATGTGGAATATCTGAAGGTAATACGATTGGTTCTCTTGGTCAAATATTAAGGTTTTCGTTCATTCTTAGAAACTGTTGTTTTAAAATCTTTTTGTGCATGTCATGTGATTATTGTATTTTTTATTTTCTTTTTTATTGCAAATCTCCTGGATTCACTGCACAACTTGGTTCAATTGTAGGTGTGTAATGAAAAAATTTACCTTTCACATGCCATTCACAATCTGTTCTGGAAATTGGAATCATAGATGAGAGAAAAAAAAGGGTAAACCTATAAAGTCGGGATTGGCATATATTACGTTAGAATTTTCTGGTTTTTATTGAACCTGTCATGATATTTTTATTGTTATCCAGAAGTTATCATGTTAAAACTCTTTTCTTTAATTTACTTAGTTCACGGACATATTAACTTTTCCAGGTTAAGTCTGTGAGGCTCAAGGCTGGGCCCAACACACATGATGGATGTGGTATTGATGGTGAACTATTGCATGTCAAGGGGCAAGTTCGATGCAGTTTGCTGCCTCAGCAATGTCGATTAATCGGCAGGCCAGCCAAAAATCCTGTACAGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA033281