BGIOSGA033441

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Revision as of 05:11, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA033441| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA033441, complete gene.| tag = OS10G05...")
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Gene Name

BGIOSGA033441

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA033441, complete gene.

LocusTag

OS10G0561500

Ensembl Transcript ID

BGIOSGA033441-TA

Ensembl Protein ID

BGIOSGA033441-PA

Length

3798

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:21164681..21168478

Sequence Coding Region

21164681..21164861,21164964..21165082,21165357..21165478,21165557..21165753,21166056..21166309
,21166486..21166587,21166683..21167111,21167318..21168076,21168293..21168478

Genome Context

<gbrowseImage1> name=IndicaChromosome10:21164681..21168478 source=RiceIndica10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome10:21164681..21168478 source=RiceIndica10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCATCCAAGATAAAGTTGAGAACAACGACCCAACTGTGACTGTTGGGTTGGCCGTGAGTAGTTCCAAATCCAGTAAGTACGCCGTGCAGTGGGCTGTGAAAAACTTCTGCACCAATGGGATGGTTAGGTTCGTGCTTATCCATGTACTGCAGAGGATCACCACGGTTCCAACACCGATGGGCAACTATATCCCGATTGATAAAGTACGGGCTGACATTGCCAGCGCATATGAGAAAGAAGTCGAATGTAAGGCCCGAACGATGCTCCTTTTCTACAAGAACATGTGTGATGAGAAGGCTAAAGCTGAAGTACTGGTTGTCAAAGGTGAAGATGTGGCAGAAACCATTTCCAATGTTGTTTCAATATACGAAATCCACAAGCTTGTTGTCGGTGACTCTTCTCAGGGCAACTTTATTAGGAAATCCAAGGGTACTAGGACATCTTCTCAAATTTGCAGAAGTGTTCCAAGCTTTTGTGCAGTTTATGTTGTCTCAAAAGGTGGTTTATCCGCAGTTTATTCTCCTGGATTTGAAGGTCACAAGAGTTCTGAGCTATTCCTGTCCAGTGATAGCTCCAAAACTGAAATCCATTCAGATGATAAGCCCTCATTATCAGATGCCACACCTTCGAGAAGCTTTAGATCAAACTTGACATGGGAGAATCTGGAAAGTTTATCATCCGCAGACCATGATAGACCGCGCTCCTTACATGAGTATCTTACTGAAAGCACTTCAGCATCTGTTGGTGATAATAACAGTAATTCTCCATGTGCTAGCGGTCAAACCCCTCGACCAAGTAACGTGCTTATCTCAGATAAAGCTCCAATGACAAGCAGTCCCCTGCAGGAATTGATGCTTTCAGAGGACATGGATGATGTAAATAGCGAGCTTGAAAAGCTGAGGCTTGAACTTAGGCATATTAAAGGAGTGTGCAAACTTGTTCAGGATGAGTCCATCAATGCTTCTCAGCATGTGACTGACTTAGCTGCAAAACGTGCTGAAGAGGAAGCCCGGCTCAGCGAGGTCTACTCCAGGATCAACAGAGTCAATGAGCAAGCACATCAAGAGAAGGAACAACTGAACGCTTTGGAGGCTCAGTGCAGGCATGTGAGGGATCTTGCAAGAAAAGAAGCTTTGCAGAAGCAGATTTTGCAGCTGAGGACTTCGAAGGAGGCTGATAAGATGCAAAGGCTGGAAAAACTTCTTGAATTAGATGGGATGTCATACTCAACATTTACATGGGAAGACATTGAATCTGCTACATCATCGTTTTCAGAGGCACTTAAAATTGGATCAGGATCTAACGGAACAGTGTACAAGGGCAATCTACGTCAGACATCTGTTGCCATAAAAGTCCTCACTTCTGACGACAGCCACAGGATCAAACATTTCAAACAAGAGCTTGAGGTTTTGGGTAAGATCCGTCACCCACATCTGCTGCTGCTCATAGGTGCCTGTCTGGACAGACCATGCTTGGTGTACGAGTACATGGAGAATGGCAGCCTTGAGGATCGCTTGCAACTCAAAGGAGGCACGGCCCCACTCCCATGGTACCAACGTCTTCGCATTGCTTGGGAAATAGCCCTGGCCCTTGTCTACCTCCACAGCTCGAAGCCGAAGCCAATCATCCATCGTGACCTCAAGCCTGCAAACATACTCCTTGATAGCAATTTCACCAGCAAGATTGGCGATGTGGGCCTTTCAACATTGCTTCCGCTGGGGGATGCCTTGTCGACAACGCGCACAATTTTCAAGGACACAGATCTAGTTGGCACACTGTTTTACATGGACCCAGAGTACCAAAGGACAGGCCAAGTGTCAACAAAATCTGACACATACGCCTTGGGCATGGTTTTATTGCAGCTGCTCACTGGAAAGCCACCTGTGGGGCTAGCAGACCTTGTGGAGCAAGCAGTAGAAAATGGTCACCTTGTTGACATCTTGGACAAGAGTGCTGGGAAGTGGCCTGCACAAGAAGCACATGAGCTAGCGCAGCTTGGCCTAAGCTGTTTGGAAATGCGAAGCAAGCATAGACCAGATCTGAAGTGTAAGGTTCTTGTGGAGCTGGAACGGCTGAAAAAAATTGCCAGTGCTGTCTCTGACCCTGTACGGCCAGTGATATCTGGACCACCAAGCCATTTTATCTGCCCAATACTCAAGAGGATAATGCAGGACCCATGCATTGCATCTGACGGGTACTCGTACGACCGGGTCGCTATTGAGATGTGGTTGTGCGAGAATGACATGTCACCGATTACAAAATCGCGGCTTCCTAACAAGGATTTGGTTCCCAACCATGCTCTGTTATGTGCAATTACAAGTTGGAAGGCAGAAGCAAGGGACTGA</cdnaseq>

Protein Sequence

<aaseq>MAIQDKVENNDPTVTVGLAVSSSKSSKYAVQWAVKNFCTNGMVRFVLIHVLQRITTVPTPMGNYIPIDKVRADIASAYEKEVECKARTMLLFYKNMCDEKAKAEVLVVKGEDVAETISNVVSIYEIHKLVVGDSSQGNFIRKSKGTRTSSQICRSVPSFCAVYVVSKGGLSAVYSPGFEGHKSSELFLSSDSSKTEIHSDDKPSLSDATPSRSFRSNLTWENLESLSSADHDRPRSLHEYLTESTSASVGDNNSNSPCASGQTPRPSNVLISDKAPMTSSPLQELMLSEDMDDVNSELEKLRLELRHIKGVCKLVQDESINASQHVTDLAAKRAEEEARLSEVYSRINRVNEQAHQEKEQLNALEAQCRHVRDLARKEALQKQILQLRTSKEADKMQRLEKLLELDGMSYSTFTWEDIESATSSFSEALKIGSGSNGTVYKGNLRQTSVAIKVLTSDDSHRIKHFKQELEVLGKIRHPHLLLLIGACLDRPCLVYEYMENGSLEDRLQLKGGTAPLPWYQRLRIAWEIALALVYLHSSKPKPIIHRDLKPANILLDSNFTSKIGDVGLSTLLPLGDALSTTRTIFKDTDLVGTLFYMDPEYQRTGQVSTKSDTYALGMVLLQLLTGKPPVGLADLVEQAVENGHLVDILDKSAGKWPAQEAHELAQLGLSCLEMRSKHRPDLKCKVLVELERLKKIASAVSDPVRPVISGPPSHFICPILKRIMQDPCIASDGYSYDRVAIEMWLCENDMSPITKSRLPNKDLVPNHALLCAITSWKAEARD</aaseq>

Gene Sequence

<dnaseqindica>1..181#284..402#677..798#877..1073#1376..1629#1806..1907#2003..2431#2638..3396#3613..3798#ATGGCCATCCAAGATAAAGTTGAGAACAACGACCCAACTGTGACTGTTGGGTTGGCCGTGAGTAGTTCCAAATCCAGTAAGTACGCCGTGCAGTGGGCTGTGAAAAACTTCTGCACCAATGGGATGGTTAGGTTCGTGCTTATCCATGTACTGCAGAGGATCACCACGGTTCCAACACCGAGTGAGTGCATATTTGATGTGTTTCCTACTGTGTAGATGTATACTTTCGTTTGTAAATCATGTTGTCACTTAAATATATCTCTTTTTCTTGCTTCTTTTGTAGTGGGCAACTATATCCCGATTGATAAAGTACGGGCTGACATTGCCAGCGCATATGAGAAAGAAGTCGAATGTAAGGCCCGAACGATGCTCCTTTTCTACAAGAACATGTGTGATGAGAAGGTATGACGTTGCCACTTCAGGCCATCCTTTTTTTCTTTTCCGTTCCAAAATGAACATTCCTAAGGGCACACTGGAGCCAAATATAATGAAATACAACTGAATAAGCACAATTCACAACAGTATTTATTCAGGACATTTCATAATGTTAATTTTGTTCAGAATTGTACTTTCGTATAGAGTCAGAAATTATGAGAACAGGTTAGAACTCAGCAATGATACTCATAGTTTTAAACATCCTGCTGAACATGTGTATACATTTTCTGATCTTGTTCAGGCTAAAGCTGAAGTACTGGTTGTCAAAGGTGAAGATGTGGCAGAAACCATTTCCAATGTTGTTTCAATATACGAAATCCACAAGCTTGTTGTCGGTGACTCTTCTCAGGGCAACTTTATTAGGTACTTAACATGTTCTGTAATAAATAATGGTGAACTGCATGCATCAAAATGCTGATTAATTTGGTGGAAATGTCTTAGGAAATCCAAGGGTACTAGGACATCTTCTCAAATTTGCAGAAGTGTTCCAAGCTTTTGTGCAGTTTATGTTGTCTCAAAAGGTGGTTTATCCGCAGTTTATTCTCCTGGATTTGAAGGTCACAAGAGTTCTGAGCTATTCCTGTCCAGTGATAGCTCCAAAACTGAAATCCATTCAGATGATAAGCCCTCATTATCAGGTGAAGTTATCTGTCCGTAAAACTGGCACTGGAAATTTTCACTGTGTACTGTATAGACAAGATAACATAATGACTGCTTCCAACTTTGAACCTTTTCGTCCTTGGTACTCTTTGAAGCTGATATAGAATGGATCTTTGCTAGTCTTTGAGAAGTTTGTAGCACCTAGCTTCCTTTTCAAATGTTTGCTTGGTTCTTTGCATTCAATAAGAATTTGGAATCGAGGTCGTTTGGTTTTGAAATTCAGCAAAAAAGAAAAGAAAAAAAAACAGTGCAAGAAATTTATCCCTTTTGTCCAATGCAGATGCCACACCTTCGAGAAGCTTTAGATCAAACTTGACATGGGAGAATCTGGAAAGTTTATCATCCGCAGACCATGATAGACCGCGCTCCTTACATGAGTATCTTACTGAAAGCACTTCAGCATCTGTTGGTGATAATAACAGTAATTCTCCATGTGCTAGCGGTCAAACCCCTCGACCAAGTAACGTGCTTATCTCAGATAAAGCTCCAATGACAAGCAGTCCCCTGCAGGAATTGATGCTTTCAGAGGACATGGTGAGTCATTTGATTTTTTCACAGTAAAACTGTAATAAATTTTTTCACAGTAGTATAATTTTGCAAATGATACATCTTTGATGAATTGAGGATGAGCCTTCACTGTTTAAACTTCTTAGATAAGAATAGTTCCTTTTTTTTTCTGAATATACAGTAACTTAATTTTCTCAATGCAGGATGATGTAAATAGCGAGCTTGAAAAGCTGAGGCTTGAACTTAGGCATATTAAAGGAGTGTGCAAACTTGTTCAGGATGAGTCCATCAATGCTTCTCAGCATGTAAGTTTGGGAGTACTGTGTTTCAACATAATTAGTTGGTTACTTTATCTCCAATAGTCAGCAACTTAATTGTCATCTTGACAATCATATGTTAGGTGACTGACTTAGCTGCAAAACGTGCTGAAGAGGAAGCCCGGCTCAGCGAGGTCTACTCCAGGATCAACAGAGTCAATGAGCAAGCACATCAAGAGAAGGAACAACTGAACGCTTTGGAGGCTCAGTGCAGGCATGTGAGGGATCTTGCAAGAAAAGAAGCTTTGCAGAAGCAGATTTTGCAGCTGAGGACTTCGAAGGAGGCTGATAAGATGCAAAGGCTGGAAAAACTTCTTGAATTAGATGGGATGTCATACTCAACATTTACATGGGAAGACATTGAATCTGCTACATCATCGTTTTCAGAGGCACTTAAAATTGGATCAGGATCTAACGGAACAGTGTACAAGGGCAATCTACGTCAGACATCTGTTGCCATAAAAGTCCTCACTTCTGACGACAGCCACAGGATCAAACATTTCAAACAAGAGGTATTCCTTGAACCATTAAAGGTTGAGCAGTCAAGTCCTAATATCATCATGATCTCCGGATCTTCAGATATATTCATAGGCTAAGAAGTAAATTGCGATAACTTTGCTATGTTCAAATATGCAGTGCTACTCTTCTTGCATATATAATGCAAGATGCCATCATTGTTATCTCTAGGAAATTCTTATAAGATGCCCCTGTTCTGCAGCTTGAGGTTTTGGGTAAGATCCGTCACCCACATCTGCTGCTGCTCATAGGTGCCTGTCTGGACAGACCATGCTTGGTGTACGAGTACATGGAGAATGGCAGCCTTGAGGATCGCTTGCAACTCAAAGGAGGCACGGCCCCACTCCCATGGTACCAACGTCTTCGCATTGCTTGGGAAATAGCCCTGGCCCTTGTCTACCTCCACAGCTCGAAGCCGAAGCCAATCATCCATCGTGACCTCAAGCCTGCAAACATACTCCTTGATAGCAATTTCACCAGCAAGATTGGCGATGTGGGCCTTTCAACATTGCTTCCGCTGGGGGATGCCTTGTCGACAACGCGCACAATTTTCAAGGACACAGATCTAGTTGGCACACTGTTTTACATGGACCCAGAGTACCAAAGGACAGGCCAAGTGTCAACAAAATCTGACACATACGCCTTGGGCATGGTTTTATTGCAGCTGCTCACTGGAAAGCCACCTGTGGGGCTAGCAGACCTTGTGGAGCAAGCAGTAGAAAATGGTCACCTTGTTGACATCTTGGACAAGAGTGCTGGGAAGTGGCCTGCACAAGAAGCACATGAGCTAGCGCAGCTTGGCCTAAGCTGTTTGGAAATGCGAAGCAAGCATAGACCAGATCTGAAGTGTAAGGTTCTTGTGGAGCTGGAACGGCTGAAAAAAATTGCCAGTGCTGTCTCTGACCCTGTACGGCCAGTGATATCTGGACCACCAAGCCATTTTATCTGCCCAATACTCAAGGTATTTTTTGGCTTATTGCAATACATCAGCTTTAAGTGAATTACATCACAACTACCTGTAGCTCATTGTCTTGTAAGAATGTTTCTGTTTCAGAATTTGAACTATATTACACTTCAAGGTGGTCTGTAATTCAACTTTTTACTCTTACCTTGTTGTATCCATTTTTTTCGAAGGGTCTGAGGTGAAACTTCATTTTGCTTTTTTTCCTCCCTGTAGAGGATAATGCAGGACCCATGCATTGCATCTGACGGGTACTCGTACGACCGGGTCGCTATTGAGATGTGGTTGTGCGAGAATGACATGTCACCGATTACAAAATCGCGGCTTCCTAACAAGGATTTGGTTCCCAACCATGCTCTGTTATGTGCAATTACAAGTTGGAAGGCAGAAGCAAGGGACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA033441