BGIOSGA033454

From RiceWiki
Revision as of 05:11, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA033454| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA033454, complete gene.| tag = OSJNBA0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA033454

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA033454, complete gene.

LocusTag

OSJNBA0027P10.5

Ensembl Transcript ID

BGIOSGA033454-TA

Ensembl Protein ID

BGIOSGA033454-PA

Length

3074

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:21321686..21324759

Sequence Coding Region

21321686..21321991,21322743..21322998,21323546..21323700,21323778..21324050,21324283..21324477
,21324568..21324759

Genome Context

<gbrowseImage1> name=IndicaChromosome10:21321686..21324759 source=RiceIndica10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome10:21321686..21324759 source=RiceIndica10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCGACCCAGCCGCTGCCGCCGCCGCCGCCGAGTTCGGGGATCCCGATTCGCCGCCCGCGCCGGCCGCCGAGGAGGCCGAGGCGGCTGCGGCGGTGGGGGAGGAGGCGGTCCCGGCGGCGGAGGCCGCGGCGGCGAAGAGGTGGCCCGGGTGGCCCGGGGACAGCGTGTTCAGGCTCGTGGTCCCCGTGCTCAAGGTCGGGAGCATCATCGGGAGGAAGGGGGAGCTCATCAAGCGCCTCGTCGAGGAGACCAAGGCCAAGGTCCGCGTCCTCGAGGGCCCCGTCGGCGCCACCGAGCGCATTGTTCTTGTGTCTGGGAAAGAAGACCCAGCCTTGGAGCTTCCTCCAGCTATGGATGCTCTCATGAGAGTTTTTAAGCGTGTCAGTGGTATAACAGATGGAGCTGCTGAGGGCACACAGGCAGCTACTGCACCTGGTGTATGTGCTGCCCGTTTGTTGGTTCCTGGAGCTCAGGCAATTAACCTAATTGGGAAGCAAGGTGCTTCAATTAAGGCCATCCAAGAGGGCACTGGTGCTACAATACGGGTTATATCAATAGATGAGCGAGAGCGACCTTTCTATGTAATTGAAGATGAAAGGATAGTTGAGATCCAGGGGGAAACAGAGAAAGTCCTAAAAGCACTTCAAGCAGTTTCTAATCATCTCCGGAAGTTTTTGGTTGACCATAGTGTACTTCCATTGTTTGAGAAGACTAATGCTACAGTAACTCAAGATCGCAGCACTGATGCTTGGACTGATATATCACATCCTTCAATTGTTTCTGCACAAATAAACCAACCACCTCCTGTGGTTGATGAATATATTCTTCCAATGAAGAGAGACCCTCTGTTTCTCGAACGGGAACCATTGATAGACCACAATATTCATCGCTCAGGTGTTTCGCTTTATGGGCGGGATCCTGCCTTGTCAACATTACGAACCTCTGGAATACATGGTGGTGGACCTGGTGGCCCTCTACTTTCACAGATAACTCAAACAATGCAAATTCCCCTTACCTACGCTGAAGACATAATTGGAGTGAAAGGAGCAAATATTGCATACATACGAGCTAACAGTGGTGCAGTCGTCACAATTCAAGAGAGTTTGGGGAGCCCTGACGATATTACTGTTGAAATGAAGGGGACATCATCACAAGTACAAGCTGCCTATCAACTCATCCAGGATTCTCTGGCGGCACATAGGGATTCTGTCAGGAGCAGCTATGCAGGATTAGATCCAGTATATAGGCCAAGCTATTCACAGTATGGCAGCTCGACCTATCCGTCGTCGTCATTGCCATCGTATTCTAGCATGGATGGGGGTGGATATTCGTCTTCAGGTCTCGGTGGATATGGGTCATCTTACCGGTACTAA</cdnaseq>

Protein Sequence

<aaseq>MADPAAAAAAAEFGDPDSPPAPAAEEAEAAAAVGEEAVPAAEAAAAKRWPGWPGDSVFRLVVPVLKVGSIIGRKGELIKRLVEETKAKVRVLEGPVGATERIVLVSGKEDPALELPPAMDALMRVFKRVSGITDGAAEGTQAATAPGVCAARLLVPGAQAINLIGKQGASIKAIQEGTGATIRVISIDERERPFYVIEDERIVEIQGETEKVLKALQAVSNHLRKFLVDHSVLPLFEKTNATVTQDRSTDAWTDISHPSIVSAQINQPPPVVDEYILPMKRDPLFLEREPLIDHNIHRSGVSLYGRDPALSTLRTSGIHGGGPGGPLLSQITQTMQIPLTYAEDIIGVKGANIAYIRANSGAVVTIQESLGSPDDITVEMKGTSSQVQAAYQLIQDSLAAHRDSVRSSYAGLDPVYRPSYSQYGSSTYPSSSLPSYSSMDGGGYSSSGLGGYGSSYRY</aaseq>

Gene Sequence

<dnaseqindica>1..306#1058..1313#1861..2015#2093..2365#2598..2792#2883..3074#ATGGCCGACCCAGCCGCTGCCGCCGCCGCCGCCGAGTTCGGGGATCCCGATTCGCCGCCCGCGCCGGCCGCCGAGGAGGCCGAGGCGGCTGCGGCGGTGGGGGAGGAGGCGGTCCCGGCGGCGGAGGCCGCGGCGGCGAAGAGGTGGCCCGGGTGGCCCGGGGACAGCGTGTTCAGGCTCGTGGTCCCCGTGCTCAAGGTCGGGAGCATCATCGGGAGGAAGGGGGAGCTCATCAAGCGCCTCGTCGAGGAGACCAAGGCCAAGGTCCGCGTCCTCGAGGGCCCCGTCGGCGCCACCGAGCGCATTGTGAGTGCCCCGCGCTAGTTAGTTTATCGAGTGCCTATGTAGTTCTTTCCGTTCAATTTGTCGAGTATTTTAGAAGCTCTAAATTTGACATTAAATTGTTGGATTGTCTGGTAGGTAGGATCTTTTCTTAGAGATGTTATTTAGTGCTCTGAATTAGAGATTTTGTGAGTTAGCTGCTTAGGTTGGGTGTATATTCAGTAAAAATTTTGTTGATTGTTTTGCTTTGACTTATATATGTTAGCCTATGAGTTGCTGCAATTGTTAATTGCATTTTTTGTCATGTCAAATAATAGAGCAGAGGTGGACAGGTGGTTTATATTATTCTTAAATTGGTTAAAATTTCAAGCCAAATTTAGAGCTGATGTTGATTGCGTGTAGTATTGGTGTGTGGTGGTGGCCTTATTGTAATTATGCTTGTTAGGGTGGTCTTATCCTGAAGTTATTGGACTTGTTATTGCTTACGATTGTAGGCAGTTCATCTCTCAAGATGATGGGTAGTGAACAGATGGCATTCAATATGTTTTCCTGCATTTGTATCTCGCCTGGTTTGGTGTGACTCAAACAGAACGATCTTATTTATAATTTGGTTCAAATTGATGAAAGCAATAATCTATCATTCTATCTGTTCTCTGAATGTGTTCGAAATTTTGTATTGGGCACTCACATTAGTGTTGTTTGCATTATTGTTTAGTCGTTTGATGTTATCCTTTGGATTCACTAACTGAATCAATCCCACGCCTCTTGGTTATAGGTTCTTGTGTCTGGGAAAGAAGACCCAGCCTTGGAGCTTCCTCCAGCTATGGATGCTCTCATGAGAGTTTTTAAGCGTGTCAGTGGTATAACAGATGGAGCTGCTGAGGGCACACAGGCAGCTACTGCACCTGGTGTATGTGCTGCCCGTTTGTTGGTTCCTGGAGCTCAGGCAATTAACCTAATTGGGAAGCAAGGTGCTTCAATTAAGGCCATCCAAGAGGGCACTGGTGCTACAATACGGGTTATATCAATAGGTAATGTACTCTCGCTTGATGCATAGCATGTTAATACACCATTGCCTTTGTGCCAATTTGATGGTTAAAATTTCTGTAAAAGTTTGATTTTACACCAGGGCTTGCTGTGCATTATTCTGTGATCCTTTGTTTATACTGTTTGTATGGGTTTAAGGCTTTAAGCAAGTAATAGATATTTTGAAGTCTTCCCCTGTTAGTATTAACCATGGTCTTGATATGCGTATTTTATTCAAAGAAAGCGTGGTAGAGCACTTTGCATGTCTTCTTGCATGGAAGAACGTATCATGTCCATTCTACTCTTGGTCACAGTCAGTAGAAAATATTGTGGGAAAAGTTTCAAATTAGCACATAACATTGTTGCGTAGAAAACCCAAAGGCTTAACTTTTCTAGATGTAGAAAGATATCAAGGGATCAACAAAAATGAATTAGTACAATTTTGTACAAACAAATGCGTGTTGATGGTATTGTACTTAAACACCCTCTAAAATTTTCAATTACCCTGAAAAGTGACAGCAATATATAATATCAACTTATAAATTTATGTAGATGAGCGAGAGCGACCTTTCTATGTAATTGAAGATGAAAGGATAGTTGAGATCCAGGGGGAAACAGAGAAAGTCCTAAAAGCACTTCAAGCAGTTTCTAATCATCTCCGGAAGTTTTTGGTTGACCATAGTGTACTTCCATTGTTTGAGAAGACTGTAAGCACATTTATCTCATGTTTTACTTTACCCTTCTTATCAATCCTAATATATGCCGTTTCTGATTTGTTTCTCAGAATGCTACAGTAACTCAAGATCGCAGCACTGATGCTTGGACTGATATATCACATCCTTCAATTGTTTCTGCACAAATAAACCAACCACCTCCTGTGGTTGATGAATATATTCTTCCAATGAAGAGAGACCCTCTGTTTCTCGAACGGGAACCATTGATAGACCACAATATTCATCGCTCAGGTGTTTCGCTTTATGGGCGGGATCCTGCCTTGTCAACATTACGAACCTCTGGAATACATGGTGGTGGACCTGGTGGCCCTCTACTTTCACAGGTATGGTTGATCTTGGGTTTCACATGCATCTTCATTTTTTTTTTCTGATGAGCTGTTTGCTGGAACAAACATGATTCATGTGGTTCTTTGATTTTGAAATCTGTTGTAATTTGAGTCTCTTTTGCCTTTGATTATGCATCCTATCCATTAATATATGTTTGCCAGTTATTATTTATCAGTACAAATATTTATTTCCTCGTACTGTTTACTGACTAGAACACGTGGCACGCAGATAACTCAAACAATGCAAATTCCCCTTACCTACGCTGAAGACATAATTGGAGTGAAAGGAGCAAATATTGCATACATACGAGCTAACAGTGGTGCAGTCGTCACAATTCAAGAGAGTTTGGGGAGCCCTGACGATATTACTGTTGAAATGAAGGGGACATCATCACAAGTACAAGCTGCCTATCAACTCATCCAGGTAATACCATGGCATATATATACTCCTTAAAATTTTGTATTTTCAAGTTTCAGCCATAAAAATCTCTAATGTCATGTCCTCCTCCCTCAGGATTCTCTGGCGGCACATAGGGATTCTGTCAGGAGCAGCTATGCAGGATTAGATCCAGTATATAGGCCAAGCTATTCACAGTATGGCAGCTCGACCTATCCGTCGTCGTCATTGCCATCGTATTCTAGCATGGATGGGGGTGGATATTCGTCTTCAGGTCTCGGTGGATATGGGTCATCTTACCGGTACTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA033454