BGIOSGA033727

From RiceWiki
Revision as of 08:40, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA033727| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA033727, complete gene.| tag = OS11G06...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA033727

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA033727, complete gene.

LocusTag

OS11G0602300

Ensembl Transcript ID

BGIOSGA033727-TA

Ensembl Protein ID

BGIOSGA033727-PA

Length

3842

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:19001680..19005521

Sequence Coding Region

19005466..19005521,19003891..19003917,19003670..19003792,19002551..19002794,19001680..19002174

Genome Context

<gbrowseImage1> name=IndicaChromosome11:19001680..19005521 source=RiceIndica11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome11:19001680..19005521 source=RiceIndica11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGGTCCGGATCTTTGCTCAAGGTTCTTGCCAAGAACTTCGATGTTCTTGCTGGGCCTTTGGTTGCACTAGCTTATCCGTTGTACGCTTCAGTTAAGGCAATAGAAACCAAATCCCCTGTGGATGATCAACAATGGCTCACATACTGGGTGATGTACTCATTAATAACATTGTTTGAGCTCACATTTGCATCAATTATTCAGTGGCTTCCTTTTTGGCCATCTATGAAATTGATCTTTATTTGCTGGCTTGTCTTGCCATACTTCAATGGTGCAGCCTTTGTGTACCAAAATTATGTGAGACCTATGTTTGTGAAGCACCAAATGGTTAACATTTGGTATGTCCCTCAGAAAAAGGGCCTTTTCGGTAAATCCGATGACTTCCTCACAGCACTTGATAAATTTATTGAAGAAAATGGACCTGAAGCTCTGAAGAAACTGACTAACAAGGCTGGCAAATCATCTAAACAGTCTGGCAAATCATGGAAAGATTCAAAGTCATCAAAGGAGTCAAAAGATTCGAAGTCATCAAAGGAATCCAAAGAACCAAAACCATCGAAAGATTCAAAGCAACTGAAGCCACCAAAAGTTTCGAAAGAGTCGAAGCCATTGAAGGACTCGAAAGAAGACAAGAAGGCAGTGAAAGAAGATAAGAAGGCGGCTGCGAAAGATTCGAAAGAACAGAAGAAGGCACTGAAGGACTCGAAAGAACTAAAAAAGGCGTTGAAGGACTCGAAAGAACAGGGGTTGCAGAAGGATTCAGATGAACTTAAACCAAAGAGCAACAAGCGCGTGACGTTCGCTGAGGTGGAGCCCGAGAAGGAACTCAAGGCCTCCAACAGCGACTGGCATCCGACCTCCGAGTATCACAGCGTGTACCCGGAGCACAACTCATGGAGCAGCAGCTTCATGATCTTTGAGGATGAGAACAGTTACTGGAACTAG</cdnaseq>

Protein Sequence

<aaseq>MGSGSLLKVLAKNFDVLAGPLVALAYPLYASVKAIETKSPVDDQQWLTYWVMYSLITLFELTFASIIQWLPFWPSMKLIFICWLVLPYFNGAAFVYQNYVRPMFVKHQMVNIWYVPQKKGLFGKSDDFLTALDKFIEENGPEALKKLTNKAGKSSKQSGKSWKDSKSSKESKDSKSSKESKEPKPSKDSKQLKPPKVSKESKPLKDSKEDKKAVKEDKKAAAKDSKEQKKALKDSKELKKALKDSKEQGLQKDSDELKPKSNKRVTFAEVEPEKELKASNSDWHPTSEYHSVYPEHNSWSSSFMIFEDENSYWN</aaseq>

Gene Sequence

<dnaseqindica>1..56#1605..1631#1730..1852#2728..2971#3348..3842#ATGGGGTCCGGATCTTTGCTCAAGGTTCTTGCCAAGAACTTCGATGTTCTTGCTGGGTCAGTCAGTCGCACCGCCCTGCCTTCGCTCTCACCCCGCCCCCCCCCCCCCGAATGAATATTCGGTTCTTTGTTTTTTGGTTCATCTCTTTCCCGTTTTGTTCTTTCCTTTCGGAATGGCGATGATTTTACCACCAATGGGTGGATTCTTAGTGATGTGTTTGCTCGTCCGGTTCAATGTACCATTGCGGTAGCTGTTCTTGATTCTTGTGGTCCGTGAGTTGCTGAGGGTGTTCCCCCCCCCCCCCCCCCCCCCCCGCTGGTTGTGGCTTGGAATCGAGTAATGTTGGTTTCGAAGAGTAGTACCATGCTTAAATTTTTCAGTGGATATTTCAGGATCGGAAATGTTCTTGCTTTTCTTGATGTAACTGGCGATTTCATTTGAAAGAAATAGAAATAAACACTTCCTTCCTAGTAGATTAGTAGGAGTACATTTTTTTCCTTTTTATTAACCTGCGAAGGCTTGTTCTTCCTGAAAGAATCGATCTTCTATTGCAGTCTAACATCGAGGATTTCTTCTTGTTTATTCTGCTGGAGGAAAGGCGTTTGATTTTTCGTTTATCTGTCACCAAATCCTTGCTTTTGTAGATTTTTATGTTGTTGTTGGGTGCGTTTACTGTTTTGGACTTCGAAACGTCAATTTCTTATCCCAATCTTGACACAAGAACATATCCGTTGATGCTGACATTGCAACCCGCACCTTTCCCGAATGCTTATGCGACATCAAAAATCTAAAATTTGCCTGTGATGCACGTGCTGTGGGCTGCTCTGCTGTAGATCACCAAGTCTGCAATCTGAACATGTAGATCAGATGTGGAGTTTTTGTCACTTCAATCTGCTAGGGCGGTGTATCTTTCTACTGCATCCTGACCTCTTCACAGTCTTTTAGAAAAAGCTAGTATTGCTTTCCGATTTGTAGTTTTGCTAGTGATAGTGGAGCAATTGTAGGGTAGTTCGACCTTTCGGCATTTCCACTTTCAATACTAGTTTGTTTGTTTTCTTTGTCCAATTATCTTTTCCATTAGCTGTTTCTCATTCCTTTCTATGCAGTATGTAAGAGGTCACATGCAGGAGAATGGGTGTGATTGAATAATCTGCTGCTGTTTCTTTATTATTTGGTAGATTGTCATTCATGTCTCGTAGCGATCATGGTGCATAAAGAAACAAGTGCCAGTTTTGGGCACTGTGATTTCTTTAATTCCAAGTGTGGACCGATGCATGCTGTAGAAATGCACACTACCTTCCTCTAATCGATGTCATGTTTTAGTATGCTATGTTGGATTAGAAAATATGGACATCCCTTTAGCTGCTGCGTAATTTGTAAAAGTAATATAAGAAATGATGTGGTTAATTTTATACTGACTTGCTGACTTGTCAAGGGGTGCTTTTCTACTATGTTAGAGACCATCTAATACTACCTGTTTTATCCTGAATTTAGAACCGTTCCACCTTTAATTTCCTGGCTAGCTTGGATGCTACTATGAATATGTTGTTAATGCTTTGACTTTACCTTCAGCTTAACACTTTTTTTTTTAATCTCTCATGCAGGCCTTTGGTTGCACTAGCTTATCCGTTGTAAGTTGTTTCTTGCTTTTATCCTGTTTCAACATATTCATGTTTTTTTAAAGTTAATTTGTAATGGTAAACACAGATGTAACTCGATGCTATTACAGGTACGCTTCAGTTAAGGCAATAGAAACCAAATCCCCTGTGGATGATCAACAATGGCTCACATACTGGGTGATGTACTCATTAATAACATTGTTTGAGCTCACATTTGCATCAATTATTCAGTGGTAAGTACTCTTGTAATATTTGTGGCCTTTTTAATGTAAAAAAACTTTGTACTAGTAGTTTTAGAGTTATTTATTGTTTTAGTCTGAACTATTGGAGACAAATCCCTGATCTTTGAACTAGTGGGATGTGCATACCTGCATTGCCATTTTCACACTATGTAGTATCAACATTCTGACAATCGTTAGAGCAAGACACGTGTGCATATGTCACCAAAGTTCCTGGGTCCATGGGTTGAGGAATGGGATCAAGGAGCGTGGGACGTTTCTTTCAAAAGGTTTTAACAGCGCAGGGGCAAGATTGTCCATGTGTTCCCAGGATGGGAACAACATCCTCGAAGGAACGCAATATAGTTCCACGGTCCTGATTACTTGTGTGCTTTGTTTAGTTAACAGGACACAAGTACAGAGCATTTCATTTCTGGGCAGGTAAAGACACAGTGTTCCTTAAATCAGGGTTTCAAACATAAATGATTAATCGTTCTTGGAAACAAATTATAGCAGTAGAAACTATATCCAATACCGTTCTACATAGAACTGACTACTGATCTACTTTCACTTGTAAGAGTCCCTCTTCATAAAAGTTTTTTTAAAAAGAGGATCATTACAAATGTTCCACAGTTCTGTTGTTTTATCCCTGCCATTGCAGTGTGATGAAAGGTTTGTAGGGTTTGGAATAATACACCCATGTTATTTTTTTAATTGCATACTTTATTTGGATGGTGATTACAACATAATGTTAAGGAAGAGAGACCTATTAATTCGTACTTGCTCTAGTCTTCTCTGAGTCTTTTCCATTGGCTTGCACAAATTTACAGTTAGTCATCATGGTACACTGACTTGCTGTTCCATTGTCTTTCCGTCTTCTGTTTCTACAGGCTTCCTTTTTGGCCATCTATGAAATTGATCTTTATTTGCTGGCTTGTCTTGCCATACTTCAATGGTGCAGCCTTTGTGTACCAAAATTATGTGAGACCTATGTTTGTGAAGCACCAAATGGTTAACATTTGGTATGTCCCTCAGAAAAAGGGCCTTTTCGGTAAATCCGATGACTTCCTCACAGCACTTGATAAATTTATTGAAGAAAATGGACCTGAAGCTCTGAAGAAACTGACTAACAAGGTATATTGGTCTAAATTTAGTTAAGTATATCCCAACTTCATGCACTATTGCACTATACAATTGTGAAAAATGCTCTATATAACACTAGTCTGTGTGCCCTTTCATGTTGTATGTAGTTAGCTATGATCCTGAAGTCATGGTGTTCTCTGTATAGATATGATGACAGCATTTTGATATTTGAATATGCTTACCTTGACCTAAGGCTGCAGCTTGATGGTCCACATTTCATCAGTTACTGATTAAGCAATGCTTTTTTTCCACCTCAATTTTGAGTTGTTACCGTGAACATGTTGCTATTGCTTTTAAAAGTTTCACAACCCATGTCATTTTGAGAATAAGTGACAAATTCATTATTATCTGTGGTGTTGTCTTTCAGGCTGGCAAATCATCTAAACAGTCTGGCAAATCATGGAAAGATTCAAAGTCATCAAAGGAGTCAAAAGATTCGAAGTCATCAAAGGAATCCAAAGAACCAAAACCATCGAAAGATTCAAAGCAACTGAAGCCACCAAAAGTTTCGAAAGAGTCGAAGCCATTGAAGGACTCGAAAGAAGACAAGAAGGCAGTGAAAGAAGATAAGAAGGCGGCTGCGAAAGATTCGAAAGAACAGAAGAAGGCACTGAAGGACTCGAAAGAACTAAAAAAGGCGTTGAAGGACTCGAAAGAACAGGGGTTGCAGAAGGATTCAGATGAACTTAAACCAAAGAGCAACAAGCGCGTGACGTTCGCTGAGGTGGAGCCCGAGAAGGAACTCAAGGCCTCCAACAGCGACTGGCATCCGACCTCCGAGTATCACAGCGTGTACCCGGAGCACAACTCATGGAGCAGCAGCTTCATGATCTTTGAGGATGAGAACAGTTACTGGAACTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA033727