BGIOSGA033920

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Revision as of 08:43, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA033920| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA033920, complete gene.| tag = OS11G05...")
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Gene Name

BGIOSGA033920

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA033920, complete gene.

LocusTag

OS11G0514800

Ensembl Transcript ID

BGIOSGA033920-TA

Ensembl Protein ID

BGIOSGA033920-PA

Length

2433

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:15198679..15201111

Sequence Coding Region

15200895..15201111,15200704..15200787,15200565..15200620,15200343..15200478,15200014..15200110
,15199865..15199931,15199653..15199751,15199474..15199563,15199226..15199380
,15199027..15199134,15198679..15198844

Genome Context

<gbrowseImage1> name=IndicaChromosome11:15198679..15201111 source=RiceIndica11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome11:15198679..15201111 source=RiceIndica11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGGTGTGGTGCATCAATCCCTAAGAAATGCAAGGTAGGAGGGAAGGGGAAGAAGCGCCGGAGCGTCATACAGGAGGTTGCTGTATTCGTGCCGACAATTCGCATTCCGGTGGACAGTGATGTTGCCCATCCACTCAGAGGACTAGTATCCAAGGAGCTCGTCGACCGCCTCTCAAAGTTCAGAGACCGTGTTGTCGCGCTCTCTGAAGATATCTATTGCGCGGATGTTTCGGATGTTTCAGAGTTACAGCATGCCCTTGAGGAGTACTTGCCAGTTGTTCTTGGTTTAACAATGAAAGAAAGCCGTCTTGAATCATCGGTGGAATTCAGATGGAGGACCTTGGATGATGACCAAGAGTGTTGTCTTTCAAGTGCATGGTATGAAGTTCTGTCAGTCATCCACATGATGGCGATGCTTGAATTGTTTGAAGCCAACCTGATACTTATTCCGAAGAACGGCCAAGTAGGAGGTGAAAGGAAGGTATCAGAAGATGCAAAGAAGGATGTCGTCGATTCGTTGCTCAGGGCATCAGGATGTTTAGATTACTGCGTGCACCGTATACTTGTACAGATACCGGCACAAGTCAAGAAAAGTTTTCCTAGTTATTTTCAGGAAGGTATGCTTGAGGCCATTTCAATTCAAGCATTGGCTCAGTGTGTAGAAATACAACTTGGATTGGCTTCAGAGTGTGAGAAGGCAACTCTGTCAGTAAAGAGGAGGCTAGCCTGTGAGCTAGTCAGTTATTTCTCACAGGCTCACTATTGCTTATCGGGATGCGACACGAGCGACTCGTTCGGGAAGAAGCTCCTGCTGTTTCTGAAGTGGAAATGCATGGAAGCCAAGGCAGTAGCATACTACTACCATGGCCTTGTGCTTGACAAAGGCAATGAAGCCAGCAGCCACATCAGTGCAGTGTGCTGCCTCTCTGCAGCTGATGATCTAGTTGCAGATAGCAAGAGGGCTTGTTTGAGCTTCTGCTTGGCAAACCCCATCACAAGGGTACCTCCTCCTTGGGGTATCATGAGGAATATGCACAAGAAAATCCCAGATTCTGCGTGCAAGAGATTCCAAATGTATGGATATCTTTTTGAACAAGACAATAACAGTGCACTTCAATCCTTACCAGATCTACCAGAATTTGCGCTGTCGCTGAGACCCGAAGGGTATGAACTGCCTAGCACTGATTCAATCTGGGATAATGTTGATAGCCAGCCTCAGATTCAGAGCCTCAAGGAGCATCTGGATGATGAAGACGAAGTGGAAACAAAATGA</cdnaseq>

Protein Sequence

<aaseq>MGCGASIPKKCKVGGKGKKRRSVIQEVAVFVPTIRIPVDSDVAHPLRGLVSKELVDRLSKFRDRVVALSEDIYCADVSDVSELQHALEEYLPVVLGLTMKESRLESSVEFRWRTLDDDQECCLSSAWYEVLSVIHMMAMLELFEANLILIPKNGQVGGERKVSEDAKKDVVDSLLRASGCLDYCVHRILVQIPAQVKKSFPSYFQEGMLEAISIQALAQCVEIQLGLASECEKATLSVKRRLACELVSYFSQAHYCLSGCDTSDSFGKKLLLFLKWKCMEAKAVAYYYHGLVLDKGNEASSHISAVCCLSAADDLVADSKRACLSFCLANPITRVPPPWGIMRNMHKKIPDSACKRFQMYGYLFEQDNNSALQSLPDLPEFALSLRPEGYELPSTDSIWDNVDSQPQIQSLKEHLDDEDEVETK</aaseq>

Gene Sequence

<dnaseqindica>1..217#325..408#492..547#634..769#1002..1098#1181..1247#1361..1459#1549..1638#1732..1886#1978..2085#2268..2433#ATGGGGTGTGGTGCATCAATCCCTAAGAAATGCAAGGTAGGAGGGAAGGGGAAGAAGCGCCGGAGCGTCATACAGGAGGTTGCTGTATTCGTGCCGACAATTCGCATTCCGGTGGACAGTGATGTTGCCCATCCACTCAGAGGACTAGTATCCAAGGAGCTCGTCGACCGCCTCTCAAAGTTCAGAGACCGTGTTGTCGCGCTCTCTGAAGATATCTGTATGTCACTGCCTCTCTGGCTACTGGATTCTGAACATTTTGTAATGCTAGGATACTGACAATTGTTCTTTGATTTTGTTGTGTTCGGTTGGTGACTACATATGAAGATTGCGCGGATGTTTCGGATGTTTCAGAGTTACAGCATGCCCTTGAGGAGTACTTGCCAGTTGTTCTTGGTTTAACAATGAAAGGTCTGGCCTTTTGCTTCCTAAAATTTGTGTTAATTTCAGGATCAAGCTTGATGTTGACAGTGAAATTGTTATGATTTCAACAGAAAGCCGTCTTGAATCATCGGTGGAATTCAGATGGAGGACCTTGGATGATGACCAAGTGAGTATTCTGGATAAGCGCCAACTGTAATTCCAGTTGTCTGATGTTTTTCATTGCTTTATTGAAAGATGATATTTTGAATTCAGGAGTGTTGTCTTTCAAGTGCATGGTATGAAGTTCTGTCAGTCATCCACATGATGGCGATGCTTGAATTGTTTGAAGCCAACCTGATACTTATTCCGAAGAACGGCCAAGTAGGAGGTGAAAGGAAGGTATCAGAAGGTCTGTTCATCTTTTTGCAGTAAATATCTCTATAATTTTTATGAATATTCATACATTGGTGATATGTGCTTAGTTTTTAATCTTAATTGTAACATAGTTGAATTGTCTGAACAATATTATAGAATGCATTTTGATATCTGTACAAGGAAATTCTATCACTTGAATAATACATTACTTACTAAATTTAGTGATATTGATGAAAAATGAAACATTGACTGATTTATTTCTGTAGATGCAAAGAAGGATGTCGTCGATTCGTTGCTCAGGGCATCAGGATGTTTAGATTACTGCGTGCACCGTATACTTGTACAGATACCGGCACAAGTCAAGTATGCCTGAAACCTGAAATACACAAATCCTTGACTATATATCACCTTTTATCAATCCCTTTATGGATTTGTACTATTGCAGGAAAAGTTTTCCTAGTTATTTTCAGGAAGGTATGCTTGAGGCCATTTCAATTCAAGCATTGGCTCAGGTAGTAAAATGTCTCCTTTATATAAATCCTATGAATAAAATTTTATTTTGAAGAAACTATAATGAAATTTTGAGGCATGCATTTCTTTATGTTTGTCTCCACTATGAAAAAAGTGTGTAGAAATACAACTTGGATTGGCTTCAGAGTGTGAGAAGGCAACTCTGTCAGTAAAGAGGAGGCTAGCCTGTGAGCTAGTCAGTTATTTCTCACAGGTAATGCAACTTTTTTATTTCAGAACTATATCTGATCATGCATACTGAACATTGTCTGTGAAATTTCTGATATATCTCACTATTTTCAGGCTCACTATTGCTTATCGGGATGCGACACGAGCGACTCGTTCGGGAAGAAGCTCCTGCTGTTTCTGAAGTGGAAATGCATGGAAGCCAAGGTTGCCTGAACAAACAAAACAAACACAGATCCTGAAATCTGCAAGAAGGCCTTGAATTCTGATATTTAACTCAATGTTGCATCTTGTCATCAGGCAGTAGCATACTACTACCATGGCCTTGTGCTTGACAAAGGCAATGAAGCCAGCAGCCACATCAGTGCAGTGTGCTGCCTCTCTGCAGCTGATGATCTAGTTGCAGATAGCAAGAGGGCTTGTTTGAGCTTCTGCTTGGCAAACCCCATCACAAGGTCTGAATTTTCTCTGAGAAGAATGTATTTTTATGTGTGATGCTAATCGGAATATGCGGTGATAGGAATTTTGTTTCTGAACTGAATTCAGGGTACCTCCTCCTTGGGGTATCATGAGGAATATGCACAAGAAAATCCCAGATTCTGCGTGCAAGAGATTCCAAATGTATGGATATCTTTTTGAACAAGACAATAACAGGTAATACTCTGATCTCAAGAGAAATTCCATGAAAATGATTCAAAAGCTGGAAATTGAAGCGAAATGCTTTTTCGTGTTTGTTGATATGATAATTTTCTTTGGATTTGGTTCAAGAACATGCTTGAACAATCTGTTCCTCATCTTTATTATGATCATACTCAAACTCTTATTTCCTGGAGCAGTGCACTTCAATCCTTACCAGATCTACCAGAATTTGCGCTGTCGCTGAGACCCGAAGGGTATGAACTGCCTAGCACTGATTCAATCTGGGATAATGTTGATAGCCAGCCTCAGATTCAGAGCCTCAAGGAGCATCTGGATGATGAAGACGAAGTGGAAACAAAATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA033920