BGIOSGA033937

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Revision as of 08:44, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA033937| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA033937, complete gene.| tag = OsI_362...")
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Gene Name

BGIOSGA033937

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA033937, complete gene.

LocusTag

OsI_36219

Ensembl Transcript ID

BGIOSGA033937-TA

Ensembl Protein ID

BGIOSGA033937-PA

Length

5788

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:14805658..14811445

Sequence Coding Region

14811088..14811445,14810361..14810439,14809782..14809982,14808219..14808461,14807418..14807565
,14807206..14807271,14806104..14806272,14805658..14806007

Genome Context

<gbrowseImage1> name=IndicaChromosome11:14805658..14811445 source=RiceIndica11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome11:14805658..14811445 source=RiceIndica11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCGCGATGGCGGCGGGGCCGCTCGCTCCGGCCGCTCCTCCGGCGAGGCCTCCTCGTGGCCGCCGTCTGCGCCGCCTCGCTACTCCTCCTCGTCGTCCTCCACCTCCACGGCCCTGAGCTCCCCTCGTCTTCGACCGCCCGAGCCTCCCCATTCCGGGGCGAGCTCTCCGAGGCGCGGGACTCGGATGACGGGGAGGCGGCGGCGGCGGCGGTGGAGGCTGGAGGGGGCGCCTCCACCACCGGGGCCGCGTGCGCGACGGTGGAGAGGATGGGGGAGGAGGCCGCGGGGCGGGGCTCCCCCGAGGCGGCCAGCCTCCGCGTCCGCGAGCTCATCCGCCGCCACTTCCTCCTCCACGGAGCTTCAAGAGTTAGAGAGCTTCCTGCATATGAGTTCTGCAAACAAGGGTTTGTGTTGGGGAAAGCCTCTGAAGCTGGGGGGTTATATCCTTTTGGAGAGTACATTTCTTACACCAATCATTCATTCACTATTGGAGAAGTCAAGCATTTATGGAGGAAAAATCGCTGTGCTAGAACATATGGTAGAAATCTGAGTATGAGAGTCGACAATTTTGAACACCCAACAGAGACTAATGTACTTTGCAGTGACTGGAATAGCTGGAAAGATCCAATCATCTGGTTTGATGGTACAACAGATGCAGTTGGGATCCAATTCTTTCTGAAGAATGTTCATGCTAGAATGAAAACAGCTGCTTCGTCACTCTTTGGATCCCCTGGCTCATTACGTGCGAGACCTAATACATTTGGTGAACTTATGCAAGTTATAATATCTCCTTCACAGACAGTTGAAAAGGCAGTTCAATGGGCTTTAAAGGGTTCCAGTCCTGATATTGTATTGCACATGCGCATGATGACAAACAGGCCAGTTCGAGCAAGAAAAGCTGCAGTTAATTGTATTAAGAGAGCTATAGAGATTTGTCATTTGAAGGGTACACCTCGGGTAGCAGTAATTTCAGATACACCAGGCTTTGCCAAGGATATAAAGCAAGACATCAGTGAGTTTGCTGAGGTGATTTATTTTGATCACAAAAAGTTCTCCAGGAGTTTTGATCTAGAGATAACTGGAAGTGAAAAGGCTTTGGATTTCCGTTCAAGAGACTGGGGTTCAGCTCCAAGGTGGGCAGCATTTGTTGATTTCTTTCTGGCTTCCCAAGCCAGATATGCAGTGGTCACTGGAGCACACCGACGTGTAGGGACAACCTATGCACAACTCATTGCAGCATTGGCTGCAGCTAACAGATTTGGTCGTGAGTCTTCAGGCACAAACTTCACATTCTTAAGCAGTGTCCACAGCAACCTACTGGTTGACGGCCTCTCGTCACAGGGTGGCTGGGGCCATATCTGGAACAGATATGCTGGCCCTTTGAGCTGCCAACATCAACAGCACCAATGTGCCTTGACCCCACTCCTGGCACCTGCTTGGTGGGACGGCCAATGGCAAAGCCCCATTCCTAGAGATGTGAGGAGATTGCTGGAATATGGAGTCCGGTTATCAAACACAGGAGAGGTGGATGAGAGACACCTCATGTCATACTGTAGGTCAAGGAAAGATCATGTGAAAAGGTACCGTGTTCTTCCTTCATACAATAGTTAA</cdnaseq>

Protein Sequence

<aaseq>MPRWRRGRSLRPLLRRGLLVAAVCAASLLLLVVLHLHGPELPSSSTARASPFRGELSEARDSDDGEAAAAAVEAGGGASTTGAACATVERMGEEAAGRGSPEAASLRVRELIRRHFLLHGASRVRELPAYEFCKQGFVLGKASEAGGLYPFGEYISYTNHSFTIGEVKHLWRKNRCARTYGRNLSMRVDNFEHPTETNVLCSDWNSWKDPIIWFDGTTDAVGIQFFLKNVHARMKTAASSLFGSPGSLRARPNTFGELMQVIISPSQTVEKAVQWALKGSSPDIVLHMRMMTNRPVRARKAAVNCIKRAIEICHLKGTPRVAVISDTPGFAKDIKQDISEFAEVIYFDHKKFSRSFDLEITGSEKALDFRSRDWGSAPRWAAFVDFFLASQARYAVVTGAHRRVGTTYAQLIAALAAANRFGRESSGTNFTFLSSVHSNLLVDGLSSQGGWGHIWNRYAGPLSCQHQQHQCALTPLLAPAWWDGQWQSPIPRDVRRLLEYGVRLSNTGEVDERHLMSYCRSRKDHVKRYRVLPSYNS</aaseq>

Gene Sequence

<dnaseqindica>1..358#1007..1085#1464..1664#2985..3227#3881..4028#4175..4240#5174..5342#5439..5788#ATGCCGCGATGGCGGCGGGGCCGCTCGCTCCGGCCGCTCCTCCGGCGAGGCCTCCTCGTGGCCGCCGTCTGCGCCGCCTCGCTACTCCTCCTCGTCGTCCTCCACCTCCACGGCCCTGAGCTCCCCTCGTCTTCGACCGCCCGAGCCTCCCCATTCCGGGGCGAGCTCTCCGAGGCGCGGGACTCGGATGACGGGGAGGCGGCGGCGGCGGCGGTGGAGGCTGGAGGGGGCGCCTCCACCACCGGGGCCGCGTGCGCGACGGTGGAGAGGATGGGGGAGGAGGCCGCGGGGCGGGGCTCCCCCGAGGCGGCCAGCCTCCGCGTCCGCGAGCTCATCCGCCGCCACTTCCTCCTCCACGGTGCGTGTGCTCCTCGCTGTGATCCGTGCGCCTCGAAGAGGAGATTCGATCCCCTTTGATCCTTCTGCCGCTCCTGTTTGTGTCCCTGACATGTGGGCCCGGGCCCACCTGTCATGGACTCAGTGGGTGGCCGATGATCTCTTCTTCCTCTTTGGTGATGATGAAATGTTTGCGTGGCCTCGTAGTGTGTAGTTCCATGAATCATCAATGGTTGTTATTTTGATGTGGATTGCCGTGTCCAACTTGTTGGGTAGAAGAAGAGCTAAGAACTTTTGGTTTCATCACTGCTCAATTCGAAACATTGCGGTTAAGCTACTGCAGAAATAGCACCAAGAAGGCAAGCAAGAACCGCAGCACTGCACAAGGTTTACTTGCCAACTCACTGGGAGATTGTCGTGATAGGCGAATCGATACCGACACACACGTCTACAATGCGGTCTCCGCTTTGAATGCGTAGCTATTTTTCACCTTTTGACCATGGCTGTTTCTAAATGATCTCTGTTGTTCCCTGTTGTAATTTCTCTGCTACCATCATAAACAACAAGACTTGGAACTGTGATCTTGTCTAGAGTCTTCGGCTAGCCAATTTTGAGTTCCTAGGTCGATTTTGAGGACACCCAATATTTACTTGTATCAATTTGTCATCAGGAGCTTCAAGAGTTAGAGAGCTTCCTGCATATGAGTTCTGCAAACAAGGGTTTGTGTTGGGGAAAGCCTCTGAAGCTGGGTTTGGTAATGAAATGTACAAGATATTAACAGCAGCAGCATTGAGTGTTATGTTAAACCGGTCTCTCATCATCGGGCAAACCAGGCATGTGCATTTACTCTCAATTATTTATCTTCCTTATCTATCGGGTTTGAATACGTTGGACCTATATTTTGACTTTCCTGTGATGATTATATATGAGATATTACTGTAATACATATCAAATTTAATTTTCTAGTTGGTCACTCCATCTATACATGTGATAAAGTAGGCACAATATCAATCCATCTTGAATCTGTAAAATATTGTTATGGCAACAATTAGAAATTTAGAGTATTGATGATTGATATTCACTACCATCTTACCTTTTGTTTGTTCCTTTATCGGTTTATCCAACAGGGGGTTATATCCTTTTGGAGAGTACATTTCTTACACCAATCATTCATTCACTATTGGAGAAGTCAAGCATTTATGGAGGAAAAATCGCTGTGCTAGAACATATGGTAGAAATCTGAGTATGAGAGTCGACAATTTTGAACACCCAACAGAGACTAATGTACTTTGCAGTGACTGGAATAGCTGGAAAGATCCAATCATCTGGTTAGTACTATAGTCTAAAAGTTACAATCTAGTAAAGTCACATTTTCACAGTTAGTTTTCTTGACATAACATTGATATGTTCATGATGTGTCTGCATTTGTCCCTTTCAGATATGACTAAATGACATGCCCTGTCAATTTTTTTTGTGCAAATCATGATAAGTAATATATTTAGCTAGACTTAAAGGTCTTGATTATCCCCCATATTAATGTAGATACTATTTCACTTTTTGTATTATTTCACCATGTGCTTATATGCCCTTGACTGAGATTGCATTCTATGTCTGGCACATTGCATGCATTTATGTTTGTTTTTATCCACATCAAGATTCTTTTGTAAGAACAAAATGAAGAAAATGATATTCTGTAGAATATCTGAAGTCTGAACTCTGAATATATTAAATACCCAGATGTTCATTTCCAACCAAGTTATTGAAGTTGATTATTCTCACCTTTTGTATATGGACACCACAGCGCACTAGATACTTCGGATGAATCTTGTTTCTTTTCATTAGACACATCATTTGCAGGCCTTATAGACATATGGAGTTACCAAAGTTAGTGGTTTCCATTTTTTTGGCAACAATGTAATACTGTTTTGTATACAAATACTGTTCTAGTTTTAAATAACTATAGCTCATATTCAGTATGCAGTAACTCACACGTGCAAGCATGACCTTTTGCAAATGTTTTGTAAACAGATACTTTGGAAGCACTATGCATGCACGCTGTGGGTTCTTACTGGCCTACTGCTACTGTGCTACCCCATATTATGTTTTAATTTCTTTTTCCACTTTCTACATAAAAAGTTAGATACTGGAGCGTAACCATGCTATGAGCAAACTTACTATCTTGAAATAAAAATAAAAGGACTGTATAAAAACATGATGTACTTATCTGTCTGCAATCTCCTGTTAAAATATTGCCATCTACAAGTCATCTTTGCAATTCTTTTTGATATAAGAAAACAAGTGAGCTGTATAAATATAGAAAGATTGAGGATCCATATTAAAACCAAATGTAACGATTGATGTTCCAAACCATCCATGTTTCGAGAAGGAAATAACAGCCAAGTACTAATTGGAAGAAATAAATGATGCTTGACCATTACTACTAGTACATCTGACATAAACAGCCTCCTAAAACCCCTGAACTTTTTTATTAATTAGCTGTGGGATAGAAAGTCATGCACTTGAATTGTTTTCTGGTTATGTTAGCTGGGAATTTCTTCACATCTTTGTCTTAACAGTTAATTTCCTTACCAAAACTAAATGTAAAAACCAACGCATGCTGACATAGTTTTACTTGTTAATGATGCTAGGTTTGATGGTACAACAGATGCAGTTGGGATCCAATTCTTTCTGAAGAATGTTCATGCTAGAATGAAAACAGCTGCTTCGTCACTCTTTGGATCCCCTGGCTCATTACGTGCGAGACCTAATACATTTGGTGAACTTATGCAAGTTATAATATCTCCTTCACAGACAGTTGAAAAGGCAGTTCAATGGGCTTTAAAGGGTTCCAGTCCTGATATTGTATTGCACATGCGCATGATGACAAACAGGTATGAAGCACTATCTGTGGCATAAAGGAAGGAAATAGATGTAAATTTCCACATTCATTTGAAAACATAATAGGATATTGTCAAATTTGACGTTGTAAACTTCACGTCAAAAAATAACTGGTTCATCAGTTAGCCTTGAAATATGCTGCTTCCACCTGTAGATGTGAACAGAAACTCTTGGTGCAGTTGTCAACTGAAACATAAGGATCTGTTTGACATTGCATTTGTTTGTAAAAGCAATTAAATTCCATTTTGATACAGTAATTACTAGTTAGCTGAAAGCATATGTTACATCATAACGTCAAAATCCCACTTGAATCAGTAAAGATTTGTATGATTAATAGATAGTGTGATTCATTATAGTTCAGCAAACTGGCCTGTCAACCTCTTATTTTTTTCGTTTCTTTCCTGTTGTCTAATTAATAATTTTTTAACATTTCTCTTCTATATGTTTACAAGCAGGATTGATTATAAATGTTTCAGAAATTTCAATAAACTAATGCAAATGGTAATGTCTGATTTGACGTTTTTTGCACCTTATCGATATGAGAACCTCCACCACCTACAAATTACGATTATGCAGATCAAATTTATTAGCGACCTTTCCACGTCATCTGGGTTGAACTGCTGAACATAACTCATTTTTTGACTAGGCCAGTTCGAGCAAGAAAAGCTGCAGTTAATTGTATTAAGAGAGCTATAGAGATTTGTCATTTGAAGGGTACACCTCGGGTAGCAGTAATTTCAGATACACCAGGCTTTGCCAAGGATATAAAGCAAGACATCAGTGAGTTTGCTGAGGTTAGTTACTTTGTCGAATGTTATCTCAAGGACTTCATAGTTTTATTCAAATGTAATGGGTTATGATTAGATAGTTTTCGTAGTTAATTAGCTTGGAATTTCTAAAAGGAAGGGGAATTGATGGTTATGATCTACTTTTTAAGCAGGTGATTTATTTTGATCACAAAAAGTTCTCCAGGAGTTTTGATCTAGAGATAACTGGAAGTGAAAAGGTACAATATACTCTCTTGAAAGATCCATCACTATGTTTGCCACAGTTTCTCAGTGCTGTTTACTGAAAATGTGAGAAGTATCTTCCCGGGTGTTAGATCTATTATATACTAAAAGTCCATTAAACTTCCTACAAACGCTCCTGAGCCGCCATGTGGCGCTTCTATAAACACTCCCAAACCGCCATGTGGCACTGTTTAATCTCACCATTGATTTTCACTTAAATTGGTGGACCCATTAATTTAAACCATTAGATCAGATCTATGTGTATCGTTGATTTTCATTTAAATTTGTGGACCCATTATCTTAGATAATCTGCCACAATAAAAAGAACTGAAGAAAAAGACAAGTCTCCCGTGTATGTACAACTATTCACCGGAGAAAAACATGTACGTTCTATTACCGGGAAAATAAATTACCGTGTACGTACGTATACTGCTTAACAAAAAAAGAATAAGAGCATAATGTACTTACGATTGGGAAGATATATGTTTCCAAGTACATATATGAACCTACTATATAAAAGAAAAGGAGGTATCTGAATTTCTATATTAAAAAATATTACGAGTACATCACATATTAGCTATATTTTAATTAAAAAATTATCACATAAAATCATATTTAGCTCTTTGTGTCTTACTCATCTAAATAGACTTAATAATTACTCTCTTTGTTTTCTTTAAGGAATACTAAGGCTTTGTTTGATCTAACTAATTAAGTGACCTAATCAGGACACGAAATGATACATATCATTATCACGTGATTAATTGAGTATTAAATATTGCAAAAATAAAAACGATGGGAGTGGTTCTACAATTTTGTTAACATAATTCAGCCTATCTTATTTTAAATATTTTTCAATAGAGATCTCTGCAAGTTGCTATTACACTTGTAAGAAGCAATTTCCTGCCCAAATTAAGTTCCTTCCTCTGCAGGCTTTGGATTTCCGTTCAAGAGACTGGGGTTCAGCTCCAAGGTGGGCAGCATTTGTTGATTTCTTTCTGGCTTCCCAAGCCAGATATGCAGTGGTCACTGGAGCACACCGACGTGTAGGGACAACCTATGCACAACTCATTGCAGCATTGGCTGCAGCTAACAGATTTGGTGCATATCCCTTTCTTTCATACCCGTTCTATTTTGTTTGGAACAATTCAGTATGAAGACCGAATTCTAAATAACTGTGCAATTGTCTTGTATCAGGTCGTGAGTCTTCAGGCACAAACTTCACATTCTTAAGCAGTGTCCACAGCAACCTACTGGTTGACGGCCTCTCGTCACAGGGTGGCTGGGGCCATATCTGGAACAGATATGCTGGCCCTTTGAGCTGCCAACATCAACAGCACCAATGTGCCTTGACCCCACTCCTGGCACCTGCTTGGTGGGACGGCCAATGGCAAAGCCCCATTCCTAGAGATGTGAGGAGATTGCTGGAATATGGAGTCCGGTTATCAAACACAGGAGAGGTGGATGAGAGACACCTCATGTCATACTGTAGGTCAAGGAAAGATCATGTGAAAAGGTACCGTGTTCTTCCTTCATACAATAGTTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA033937