BGIOSGA033972

From RiceWiki
Revision as of 08:44, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA033972| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA033972, complete gene.| tag = OsI_361...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA033972

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA033972, complete gene.

LocusTag

OsI_36158

Ensembl Transcript ID

BGIOSGA033972-TA

Ensembl Protein ID

BGIOSGA033972-PA

Length

5543

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:14043964..14049506

Sequence Coding Region

14048741..14049506,14046960..14048315,14046029..14046093,14044708..14045760,14043964..14044554

Genome Context

<gbrowseImage1> name=IndicaChromosome11:14043964..14049506 source=RiceIndica11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome11:14043964..14049506 source=RiceIndica11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCACATGTTCCAGAAGAGCTGGCTCTTAAAGCAAGGAAACTTATTAAGAGATTCCATGAAATCCAATATTATTCTGATAATTTTACTTTATCGGAGAATGATGGAGAGAGACGGTTTGCTCCTAATATTGGTACTCTACCCAAGACTAGCTCTGTTATATATGCACCGAAAATTATTGGAAGAGAGCAAGACAAGGACAACATTGTAGAAAAGTTGTTGTCCATGACGAGTGACAGTGTAGCTACTCCAGTTTCTATCTTGGCTATTGTCGGTATGGGTGGATTAGGCAAGACAACATTAGCACAGCTTGTATATAACGACTCAAGGATACAAGGGTTTTTTGACATGCATGCATGGGTTTGTGTGTCAGAGCAATTTGATCCTACTTACATAACAAAGAGCATCATAAGTTCATTAAAGAAGGATAATTCTGATCTATTGGAAGTTTGTAGTCCTCATGAGACATTGGCAAAACGAATAAAGCAAAAGATGGTATTACTTGTGTTGGATGATGTATGGAATGAACGAAGAGATTGCTGGGATCTGTTGTGCGAACCGATGAACACAGCAAAGTTATGTATGATTATAGTAACAACCCGTAGTGAGAGAGTGGCAAAGCTTGTGCAGACAATGCCTAATTTCTACAGCCTAAACTGCCTAAGTTCTGAAGAGAGCTGGTCATTGTTTAAGCAAGTTGCTTTTACTGTTGACAATGGAAACACTCCAAACCTTCAAGAGATCGGAATGTCTATTGTTAAAAAGTATGAGTTCTTTAGACTTGATGATAGCAGTACATCCATTGAAATTCCACAAAATGCTCGGTACATATCTATCCAAAATTTGGCATCCAGTGAGATTTCAATCACACCACTTGCTTTGAGGGCCATCATAGTGTTGCCTAGAGCAGAAGTGAACATTAATAATTCAGAAGCATTATTTTCTAACTGTGAAAAGTTACGAGCCCTCGTGTTAGGTGAAGGCTGTCTGGATCAAAACTTACCTGCCTTAATGGGAAGGTTGAAATTACTACGCCATTTGAAACTTGTCACAAGCTTCTTTAGTCACTCTGATCCATGCTGGGACCACGTTGATGGACTACGTGGAATTGGGCACCTAAATAACATGCTTACTTTGCCTCCAATTCATCTGAGAAATGATCGAATAATAGAGCTAAGGAGCTTGAACAAGCTAAGGGAGTTGAGAATAGGTGGGTTGGGACTGCACTTGACTATCGATGGAGCAAAGGATGCTAGGCTACAGAGCAAAAGGCACCTACAATTACTAAGCTTGGATTTTGGAGATTGCTGTCCAGATCACAACCAACAAGTGCAGCTACTTGAGAGCCTGCGACCACATCGCAACCTCGGAGAATTGATAATAATGAACTACGAGGGTCTGAAGTATCCCTATTGGTTGGGCGATGCTTCCTTTTCCAACTTGACTCAAATAGAACTCGGTTATTCTCACATTCAGTACCTTCCAACGCTCGGTGATCTTCCGTCCCTCGTGTCCCTCCATATCCATGACATGATGATTGTCGAGCGAATTGGCTGGGAGTTTTGCAGCCATTTTCATGGTGTTAAGGGATTCCCATCATTGACACAGTTGAGATTCAATTGGATGCATAAGTGGTCAGAATGGTCTGGAATTGTTGACGGTGGATTTCCACGCCTGCGCACTCTTTCGATCTGCCATGCCCACAGTCTAAGGCTTGATAACATTGAATCATTTCCGTTCAGATCCTTGATAACTCTCGAACTGGACAAATGCTGCTGCATCACAACCATTCCTGCATCGACTTCACTACGCACGCTGCGCATTGATCGGCGGAGCTTTGACTTGCGCAGAAGCTCAACTGATGGTCCGCGGCTGAATCGCCTCCCGTCCTTGGAGTGTTTAACAGTCATCTGCCATGACACCACAAGCATCCTTCTTCAGCCACAGCACCTGCCTTCACTCAAGAAGCTCAACTTGAGCTGCGAAAAACTGCAGTACTGCGATGGACTTTCAGGCCTCACTTCCCTCTCGGTGCTCAAGCCTTGGGGATGCCCAAAGCTCCCAATTCATAGTTTGATCCCACAGCTGCAGCTACAGACTCTGGATGTTCGTTGCTCACCAGGAATCGAGTGGGCTGCCAATGGGCCTGTACAACCATTCATTCAAGCTGGCCCAAGCAAACCCAAGTTTGGTGATTTGGTTGCTAACAATACGGTATCAGAGCCGCTGATCCATGGGATTTCAAGCATGGAGGCAACGGGGAAGTACCGCTGCGGCGTCCCGTGCAGTTGGTCATTGGATTTGGGCAAGGCTACTGCTCATGGCACCAACGCCCACAACCTGTTCGGTGAAATGTCAAGCCAAGGAGAGGTGTCCCAAGAAGATCTCAAGATATCTAAGGCCGTCCCCATCAATTCCCCCATGAACAAAGAGGAGAAAATGATGGATGAAGCTCTGGATCAGATATTGGAGAAGCTTGAACAAATGAAGACCAAGCGTAGGTGCAATGAGAAGATTGATCAGATTTTGGAGAAGTTGGACGAGATAGAAGCTAATAGGCGCAAATCATTCGAGGAGACAACTAACATCATCAAGGCGACAACCTCCATCTTCAATTCTGCATCATCTTCAACACCCCCGACCTCGCCTACTCCAGTGCTCGCCAAGTGTTCGTGGGCGTGTTCCAACAGTGCCAGTGCGTACACGACAACAAGTGCAAGCCACAACATCGATGTTCCTACTCCGACAGTCGCCATGGGCTTGCAGGTGAGTTTGAACCATGGCATTGGTACTACAACAGTGACGCCCACCAAGTGCTTGGTAAATTGCTTCGACAATGACACCGGTGTGAATCATGCCATTCTTGAGGAGTCGTTTGCTAGTACCACTGCTGCAGCCACCATGGAGACAGTGGTTAGCGAGGACAAGGCCTGCTCTATTTTCATCAATACTACTGACCTCACCAAGGTTATGCATTCAAGGTGTACGACAATCAGCCTCAAAGACAACATCGGTACTATTCAGGCCGAGGTTGCATTCCCCTTTCCGTTTCACACACTGAACATGATTGCAGCACCAAAGGAGCCCATGCTAGTCATGGCAGAAAAGCTGGATTCCATTTTCTGCATAAAATTGGTGATGCCCAACGGGTGTTTGATGAAATGCCTCAAAAGTGACAAGAGGCTGCTGGCGGGGCTTCCCAAGAGAAAACCTTGGCCACTTCCTTGGTCAGGTGGTGTGGCACAGTGGGATTTCGTTAGTTACAGGAGCTGCACCGTTGTTGAAATTTCTAGAATGCATGAGCTTGCCTTGTTGGTGCTATTAACTCAAGACCCAAGTGATGATAAAAGAGATGACTTGCTACCGGCATCCAAAAATCCATTCACCTCCTATATGATGGCACAATATTTTGAGGTTATTGAAAGCAGGCTTATTAGTGATATAAGCCACTTGGATGGCAACAATGTTCAGGATACTTGGGACTGCAAGGGAATTCTAGTTATACTAGAAGATGGTACCAGCAAATGGAGAATGCAAGGGATCAAGCCAAGTGCAAGCAAGAATATAATTTCAGCATGGAAGAATGTTTTTATTCCAACCATCAAATCAGTCTTGGAAGGTGACAAGCAATTCTGCATTTACAAGCCAAATATTAGCACTTATTTGCTATGTCATGTTGCTATGCCAACTATTCTTGGAAGGCTGAAAACAAGAGGCACAATTGTTAAGCTTGTGGTAAAATATGAGCACTGTGAAGAAGGCATACTAAGCTGGAGTGGAATATGTCATTACTCATTACAAGGAAGGGCAATAGTGATGGGAATGACCTGA</cdnaseq>

Protein Sequence

<aaseq>MAHVPEELALKARKLIKRFHEIQYYSDNFTLSENDGERRFAPNIGTLPKTSSVIYAPKIIGREQDKDNIVEKLLSMTSDSVATPVSILAIVGMGGLGKTTLAQLVYNDSRIQGFFDMHAWVCVSEQFDPTYITKSIISSLKKDNSDLLEVCSPHETLAKRIKQKMVLLVLDDVWNERRDCWDLLCEPMNTAKLCMIIVTTRSERVAKLVQTMPNFYSLNCLSSEESWSLFKQVAFTVDNGNTPNLQEIGMSIVKKYEFFRLDDSSTSIEIPQNARYISIQNLASSEISITPLALRAIIVLPRAEVNINNSEALFSNCEKLRALVLGEGCLDQNLPALMGRLKLLRHLKLVTSFFSHSDPCWDHVDGLRGIGHLNNMLTLPPIHLRNDRIIELRSLNKLRELRIGGLGLHLTIDGAKDARLQSKRHLQLLSLDFGDCCPDHNQQVQLLESLRPHRNLGELIIMNYEGLKYPYWLGDASFSNLTQIELGYSHIQYLPTLGDLPSLVSLHIHDMMIVERIGWEFCSHFHGVKGFPSLTQLRFNWMHKWSEWSGIVDGGFPRLRTLSICHAHSLRLDNIESFPFRSLITLELDKCCCITTIPASTSLRTLRIDRRSFDLRRSSTDGPRLNRLPSLECLTVICHDTTSILLQPQHLPSLKKLNLSCEKLQYCDGLSGLTSLSVLKPWGCPKLPIHSLIPQLQLQTLDVRCSPGIEWAANGPVQPFIQAGPSKPKFGDLVANNTVSEPLIHGISSMEATGKYRCGVPCSWSLDLGKATAHGTNAHNLFGEMSSQGEVSQEDLKISKAVPINSPMNKEEKMMDEALDQILEKLEQMKTKRRCNEKIDQILEKLDEIEANRRKSFEETTNIIKATTSIFNSASSSTPPTSPTPVLAKCSWACSNSASAYTTTSASHNIDVPTPTVAMGLQVSLNHGIGTTTVTPTKCLVNCFDNDTGVNHAILEESFASTTAAATMETVVSEDKACSIFINTTDLTKVMHSRCTTISLKDNIGTIQAEVAFPFPFHTLNMIAAPKEPMLVMAEKLDSIFCIKLVMPNGCLMKCLKSDKRLLAGLPKRKPWPLPWSGGVAQWDFVSYRSCTVVEISRMHELALLVLLTQDPSDDKRDDLLPASKNPFTSYMMAQYFEVIESRLISDISHLDGNNVQDTWDCKGILVILEDGTSKWRMQGIKPSASKNIISAWKNVFIPTIKSVLEGDKQFCIYKPNISTYLLCHVAMPTILGRLKTRGTIVKLVVKYEHCEEGILSWSGICHYSLQGRAIVMGMT</aaseq>

Gene Sequence

<dnaseqindica>1..766#1192..2547#3414..3478#3747..4799#4953..5543#ATGGCACATGTTCCAGAAGAGCTGGCTCTTAAAGCAAGGAAACTTATTAAGAGATTCCATGAAATCCAATATTATTCTGATAATTTTACTTTATCGGAGAATGATGGAGAGAGACGGTTTGCTCCTAATATTGGTACTCTACCCAAGACTAGCTCTGTTATATATGCACCGAAAATTATTGGAAGAGAGCAAGACAAGGACAACATTGTAGAAAAGTTGTTGTCCATGACGAGTGACAGTGTAGCTACTCCAGTTTCTATCTTGGCTATTGTCGGTATGGGTGGATTAGGCAAGACAACATTAGCACAGCTTGTATATAACGACTCAAGGATACAAGGGTTTTTTGACATGCATGCATGGGTTTGTGTGTCAGAGCAATTTGATCCTACTTACATAACAAAGAGCATCATAAGTTCATTAAAGAAGGATAATTCTGATCTATTGGAAGTTTGTAGTCCTCATGAGACATTGGCAAAACGAATAAAGCAAAAGATGGTATTACTTGTGTTGGATGATGTATGGAATGAACGAAGAGATTGCTGGGATCTGTTGTGCGAACCGATGAACACAGCAAAGTTATGTATGATTATAGTAACAACCCGTAGTGAGAGAGTGGCAAAGCTTGTGCAGACAATGCCTAATTTCTACAGCCTAAACTGCCTAAGTTCTGAAGAGAGCTGGTCATTGTTTAAGCAAGTTGCTTTTACTGTTGACAATGGAAACACTCCAAACCTTCAAGAGATCGGAATGTCTATTGTTAAAAAGTGTAAGGGCTTACCTTTAGCAATTAAGACACTAGCCAGCATGTTGCGCTATGAAACATGTGAACAGAGATGGAAAGATGTCATAGAAAGCGAGTTGTGGGACTTGGAGCAACCAAGGAGGTTTTGCCATCCTTGGAGTTGAGCTACAAGAACATGCCTATATACCTAAAACGATGTTTTGTGGCCATCTCTCTATATCCAAAAGACTATATATTCGATAGAAACCAGGTGCTTCAATTGTGGAAAGTACTAGACCTCCTTCAAAGTGACAGACATAATAATGAGACTGAAATTGGAAATAGATATCTCGATGAATTGGTTGAGCGGTCATTTCTTCTATTTCTTCTAACAAAGGTTGATGGACATTACTACAAGAAATACTTAATGCATGATCTTATTCACGATCTTGCATGCTTTGTTTCTGCAGATGAGTTCTTTAGACTTGATGATAGCAGTACATCCATTGAAATTCCACAAAATGCTCGGTACATATCTATCCAAAATTTGGCATCCAGTGAGATTTCAATCACACCACTTGCTTTGAGGGCCATCATAGTGTTGCCTAGAGCAGAAGTGAACATTAATAATTCAGAAGCATTATTTTCTAACTGTGAAAAGTTACGAGCCCTCGTGTTAGGTGAAGGCTGTCTGGATCAAAACTTACCTGCCTTAATGGGAAGGTTGAAATTACTACGCCATTTGAAACTTGTCACAAGCTTCTTTAGTCACTCTGATCCATGCTGGGACCACGTTGATGGACTACGTGGAATTGGGCACCTAAATAACATGCTTACTTTGCCTCCAATTCATCTGAGAAATGATCGAATAATAGAGCTAAGGAGCTTGAACAAGCTAAGGGAGTTGAGAATAGGTGGGTTGGGACTGCACTTGACTATCGATGGAGCAAAGGATGCTAGGCTACAGAGCAAAAGGCACCTACAATTACTAAGCTTGGATTTTGGAGATTGCTGTCCAGATCACAACCAACAAGTGCAGCTACTTGAGAGCCTGCGACCACATCGCAACCTCGGAGAATTGATAATAATGAACTACGAGGGTCTGAAGTATCCCTATTGGTTGGGCGATGCTTCCTTTTCCAACTTGACTCAAATAGAACTCGGTTATTCTCACATTCAGTACCTTCCAACGCTCGGTGATCTTCCGTCCCTCGTGTCCCTCCATATCCATGACATGATGATTGTCGAGCGAATTGGCTGGGAGTTTTGCAGCCATTTTCATGGTGTTAAGGGATTCCCATCATTGACACAGTTGAGATTCAATTGGATGCATAAGTGGTCAGAATGGTCTGGAATTGTTGACGGTGGATTTCCACGCCTGCGCACTCTTTCGATCTGCCATGCCCACAGTCTAAGGCTTGATAACATTGAATCATTTCCGTTCAGATCCTTGATAACTCTCGAACTGGACAAATGCTGCTGCATCACAACCATTCCTGCATCGACTTCACTACGCACGCTGCGCATTGATCGGCGGAGCTTTGACTTGCGCAGAAGCTCAACTGATGGTCCGCGGCTGAATCGCCTCCCGTCCTTGGAGTGTTTAACAGTCATCTGCCATGACACCACAAGCATCCTTCTTCAGCCACAGCACCTGCCTTCACTCAAGAAGCTCAACTTGAGCTGCGAAAAACTGCAGTACTGCGATGGACTTTCAGGCCTCACTTCCCTCTCGGTGCTCAAGCCTTGGGGATGCCCAAAGCTCCCAATTCATAGTTTGATCCCACAGCTGCAGCTACAGACTCTGGATGTTCGTTGCTCACCAGGTATATATATCTGTACTACTACAAAAGACAATAGTGGTGGTGAGTTGGCAGCATACATTTGCATATTTTACAAATAAGTGCCTAATATTTTCTGATATTATGTAATAGTTCAATATTTTTTAATCAAGTTAATGACATATATTTAAATATGTATGGAATTTTACCCATAGCAAAGCTTGGGTATTTTACTAGTATGTGTGCAAATGCCATATGCTCTTTCTGTTTCTCCCTCAATGGCTAGCTGACCCCACATTTGTTCTCACGTTTGTCTGCATTTGCATGTCTCCACAGCTTACAATTTCAGGCACTTTGATTGTTAAGAATATTTGATGGCCAGGATATGTTATCGGACTGCTAGCTTATACGGTGAGCATTTCACAGGATTTGTTACATATCAATGTAATTGTCTCCTGATTATCTCTGCACTCTGATTGAATTACTCATAATCTCAAGGTCACAGGAATGGAAGCACTACGAGACTTCAGTGAAACCTCAACTTTGCGGTGTTCATTTTCTGACCTCAGGGAAGGCATTGGGTTTTGGGCTCTTCCCTATCCTGATCTCTGATCGGTGTGCTTGAAGCCTAACACTGCAATTCAGGCTTGGTTTCAGAGTTTTCGACCAACACGCCATGTTTTGAGGTTGTTTTATTTTCCTTGTATTAATTCCAAATGGTGCAATGCATTAGTAGTTGGGTCGATCTCATTTTATCATATATTCAGCCGTATGTCTGATACAGATCGTACAGCATGAGTTGCATTTTCGTAAAATTTTCAGCAGCGAGTTGTCACCGACTCCGTACCTTAAATATTCAGAAGATTCGAGATTGTAATGTAATTTTCATTGTGGGAGAAATGTTTTGTTAGGAATCGAGTGGGCTGCCAATGGGCCTGTACAACCATTCATTCAAGCTGGCCCAAGCAAACCCAAGGTAAAGAACAAAAGCAACAGCATCGGTTCTTTCAGGGGAGGAAAAACACAGAAAGGGGCAGGACGGCGACCAGCCTGAGCGGCTTGGCGATCGGCGGCAGCGGCGGCGGCTTGGATCCGGGCTAGATCCTCGTCGAGTATCTATTCCCTCCTCCACCTCCCATTTCCCTAGCTTCTAGAACCTTCCAGAACCCCTGTATTTCCTCGTCTTCCACCTCCAAAAACAGCACTGTTGACTGGATAGTTGTTCGTGGTGAAATTCTTGTTAGTTTGGTGATTTGGTTGCTAACAATACGGTATCAGAGCCGCTGATCCATGGGATTTCAAGCATGGAGGCAACGGGGAAGTACCGCTGCGGCGTCCCGTGCAGTTGGTCATTGGATTTGGGCAAGGCTACTGCTCATGGCACCAACGCCCACAACCTGTTCGGTGAAATGTCAAGCCAAGGAGAGGTGTCCCAAGAAGATCTCAAGATATCTAAGGCCGTCCCCATCAATTCCCCCATGAACAAAGAGGAGAAAATGATGGATGAAGCTCTGGATCAGATATTGGAGAAGCTTGAACAAATGAAGACCAAGCGTAGGTGCAATGAGAAGATTGATCAGATTTTGGAGAAGTTGGACGAGATAGAAGCTAATAGGCGCAAATCATTCGAGGAGACAACTAACATCATCAAGGCGACAACCTCCATCTTCAATTCTGCATCATCTTCAACACCCCCGACCTCGCCTACTCCAGTGCTCGCCAAGTGTTCGTGGGCGTGTTCCAACAGTGCCAGTGCGTACACGACAACAAGTGCAAGCCACAACATCGATGTTCCTACTCCGACAGTCGCCATGGGCTTGCAGGTGAGTTTGAACCATGGCATTGGTACTACAACAGTGACGCCCACCAAGTGCTTGGTAAATTGCTTCGACAATGACACCGGTGTGAATCATGCCATTCTTGAGGAGTCGTTTGCTAGTACCACTGCTGCAGCCACCATGGAGACAGTGGTTAGCGAGGACAAGGCCTGCTCTATTTTCATCAATACTACTGACCTCACCAAGGTTATGCATTCAAGGTGTACGACAATCAGCCTCAAAGACAACATCGGTACTATTCAGGCCGAGGTTGCATTCCCCTTTCCGTTTCACACACTGAACATGATTGCAGCACCAAAGGAGCCCATGCTAGTCATGGCAGAAAAGCTGGATTCCATTTTCTGCATAAAATTGGTGATGCCCAACGGGTGTTTGATGAAATGCCTCAAAAGTGACAAGAGGCTGCTGGCGGGGCTTCCCAAGAGAAAACCTTGGCCACTTCCTTGGTCAGGTGGTGTGGTTAGAGGAGGGAATGTGTGGCATGTTCCATGGTCTGCATTTGATTCCGTTTAGACAAGTGTATGTCTAATACCACCATGGCCACCGCCAATTAGACTTAAGCAATGCAGGTCCTGGAAAATTGGAGTGGCAATTAGTCTGTTTGCTTGGAAGGCACAGTGGGATTTCGTTAGTTACAGGAGCTGCACCGTTGTTGAAATTTCTAGAATGCATGAGCTTGCCTTGTTGGTGCTATTAACTCAAGACCCAAGTGATGATAAAAGAGATGACTTGCTACCGGCATCCAAAAATCCATTCACCTCCTATATGATGGCACAATATTTTGAGGTTATTGAAAGCAGGCTTATTAGTGATATAAGCCACTTGGATGGCAACAATGTTCAGGATACTTGGGACTGCAAGGGAATTCTAGTTATACTAGAAGATGGTACCAGCAAATGGAGAATGCAAGGGATCAAGCCAAGTGCAAGCAAGAATATAATTTCAGCATGGAAGAATGTTTTTATTCCAACCATCAAATCAGTCTTGGAAGGTGACAAGCAATTCTGCATTTACAAGCCAAATATTAGCACTTATTTGCTATGTCATGTTGCTATGCCAACTATTCTTGGAAGGCTGAAAACAAGAGGCACAATTGTTAAGCTTGTGGTAAAATATGAGCACTGTGAAGAAGGCATACTAAGCTGGAGTGGAATATGTCATTACTCATTACAAGGAAGGGCAATAGTGATGGGAATGACCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA033972