BGIOSGA034146

From RiceWiki
Revision as of 08:47, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA034146| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA034146, complete gene.| tag = OsI_358...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA034146

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA034146, complete gene.

LocusTag

OsI_35816

Ensembl Transcript ID

BGIOSGA034146-TA

Ensembl Protein ID

BGIOSGA034146-PA

Length

2312

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:8804411..8806722

Sequence Coding Region

8806540..8806722,8805924..8806000),complement(8805470..8805531,8805247..8805365),complement(8804525..8804692
,8804411..8804443

Genome Context

<gbrowseImage1> name=IndicaChromosome11:8804411..8806722 source=RiceIndica11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome11:8804411..8806722 source=RiceIndica11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCTACAACTACAAGTAGCAGCAGCAGCGGCGGCGGCAACCGGATCTGGACCTCCTCGCTCGCCGTACTCGCGCTCGCCGTCGCCCTCGTCTCCCTCCTCTCCCTCCGCGCGCCGCCACCTGCTGCGCCCAGCATGGCCGACGACCTGCCCACCTCCGTCCACGACATCTCCGTCAAGGATATAAAGGGAAATGATGTGAAGCTGAGCGAGTATGAGGGGAAGGTTCTTCTTATTGTTAATGTGGCCTCAAAATGTGGCTTAACAAATTCCAATTACAAGGAGTTGAATGTCTTGTACGAGAAATACAAAGAAAAAGGCCTTGAGATACTCGCATTTCCGTGCAACCAATTTGCTGGTCAAGAGCCTGGCAGCAATGAAGAGATTGAGCAAACAGTTTGTACCAGATTCAAAGCAGAATTTCCTATTTTTGACAAGATTGATGTTAACGGGAAGGAGGCCGCACCGCTATACAAGTTCTTGAAATCACAGAAAGGTGGATTCCTTGGTGATGGCATCAAATGGAACTTCACGAAGTTTCTCGTTGGTAAAGATGGCAAGGTTGTTGAGCGATATGCCCCGACGACTTCTCCATTAAAGATTGAGAATGATATCCAGAAGCTACTTGGGACCTCGTAA</cdnaseq>

Protein Sequence

<aaseq>MAATTTSSSSSGGGNRIWTSSLAVLALAVALVSLLSLRAPPPAAPSMADDLPTSVHDISVKDIKGNDVKLSEYEGKVLLIVNVASKCGLTNSNYKELNVLYEKYKEKGLEILAFPCNQFAGQEPGSNEEIEQTVCTRFKAEFPIFDKIDVNGKEAAPLYKFLKSQKGGFLGDGIKWNFTKFLVGKDGKVVERYAPTTSPLKIENDIQKLLGTS</aaseq>

Gene Sequence

<dnaseqindica>1..183#723..799#1192..1253#1358..1476#2031..2198#2280..2312#ATGGCGGCTACAACTACAAGTAGCAGCAGCAGCGGCGGCGGCAACCGGATCTGGACCTCCTCGCTCGCCGTACTCGCGCTCGCCGTCGCCCTCGTCTCCCTCCTCTCCCTCCGCGCGCCGCCACCTGCTGCGCCCAGCATGGCCGACGACCTGCCCACCTCCGTCCACGACATCTCCGTCAAGGTAGCCATGCTACGGCGTCTCGCTTTTCTCTTTTTTGATACTGTCTCGTGGTTTCTTGAAAGAGGGTGGATGAGGAGGTTCTTTCCGTGATTGGGGCTCGATGCGATGTAGTCTAGTGAGATGTTGCTTTTAGTTGTGGGGGGTGATTGTTTTTATCTTTGGCCAGGAACCCTAGATTGCTCCTTTTGTTGGGAATATTTGTAATTCTTGGCGGAATTGGATCATGTCGCCATGATGGGACGTTGGATTTCAGGTTAATTCTGTTGTTGTCACCGTAAAGATGAACTTTATTCTATATTAAGGTTAGATGGGAAGTTTACCTTTTCTCTGAACATAGCACAGTGTGGATAGATGGCGTCAGTTGTGATAGGGACTTTCACATCCTACCGATGTTATTAGTAGTAATTGGTTTAACATTACTGTGCGAAATTTCAGTTGAACATACTTAGTGATTAACGCTTTCCTACTTAACTCTTTATGTTACTCCGTATTCTGTTTCTTTGATTCGGCCTGTCAGCTGATGTTTGGTTCTTCCAAAGGATATAAAGGGAAATGATGTGAAGCTGAGCGAGTATGAGGGGAAGGTTCTTCTTATTGTTAATGTGGCCTCAAAATGGTACTTATCAGATCAGATTTCATTTATTTAGTTTTTAGGTAGACCTAACGTATTGCTCTCGGATTCTCATGAATTGGAAAATTGAAGTTTATCTAAGAATTAATTCATTAAGTTGAGCTGAACTTGTCAAATTACTAATTCTTTTTCAATGATTGGTATATGTGTGCTTGTGACATATATGCTCGTTTATTGGGATTTAGACCTCGCATATTCTGTCGAACATAAAAGTCATTGAAGTCCAACACACTTGTTCCATTGTTGGTCTTCTCACCAATACATTTGTGTTAGGCAGAGTGTTGCGTAATGACAAATGCTATGTCGTCATGTTTTCTCCTCTAGTGTGGGCTATATGAACATTTATGTTTCATTACTTCACCTTTACTCTTTTGTAGTGGCTTAACAAATTCCAATTACAAGGAGTTGAATGTCTTGTACGAGAAATACAAAGAAAAAGGTATGCTCATTGCCACTGTTTTGAAGTTTAATCCTGATTCAGTTTATCTCAAAAGTAGCTTTTGTACATTCATTATCACTCTGTTGTTTATAAACGGCATTCAGGCCTTGAGATACTCGCATTTCCGTGCAACCAATTTGCTGGTCAAGAGCCTGGCAGCAATGAAGAGATTGAGCAAACAGTTTGTACCAGATTCAAAGCAGAATTTCCTATTTTTGACAAGGTTGGTGGGCTTCACCTAGTCCTTCCATCTTTCCGTAAAACAGTCTCTTGCTGTACTATGTTATTGATTTTTTTCCTACAGCTTGGTACTATTTTAAGTGCAAAAATAAGGTGTCTACTTAATGTTCATAGCATTGTTTAGATTAATGGGTTTTCAATGTTCATTGCTCTGTACAGATGAATGTGGATTTCCCCCCTCTCAATTCTAGACCAATTGTAATGCCTTTCTAGATAATATTTTTAGATCAATTTCATATTTCCAGGAATGCTTTCTTTGTGAAAAAAGATTTGTATGTAATAAATTACTCTCTTCTGTAAAACATTCAATTAATTCACTATGTCATACGGAAGATATAAGAGGCAAGTGATTTTAAGAATAACCCTACATTGCAAACCAAGACTGTAACTTATCAAGTTATTATTGAGTTGTGTGAACTAACTGGTTCCCTCAAAACTTGAAGTTACTTCAGAACAGATACTGTTATATTTCCATATATGTCAAAACAAATACTTCTATATTCCAATATACATACTTGATGCATTGTGAATGCTTAGATTGATGTTAACGGGAAGGAGGCCGCACCGCTATACAAGTTCTTGAAATCACAGAAAGGTGGATTCCTTGGTGATGGCATCAAATGGAACTTCACGAAGTTTCTCGTTGGTAAAGATGGCAAGGTTGTTGAGCGATATGCCCCGACGACTTCTCCATTAAAGATTGAGGTTTGACCCTCTATCAAGCGCCATTCGTATTTATTTGTTTTTCTTCTTTGTGAGCTGATACTCCTTTGGTACCCTATGCAGAATGATATCCAGAAGCTACTTGGGACCTCGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA034146