BGIOSGA034343

From RiceWiki
Revision as of 08:50, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA034343| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA034343, complete gene.| tag = OS11G02...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA034343

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA034343, complete gene.

LocusTag

OS11G0205500

Ensembl Transcript ID

BGIOSGA034343-TA

Ensembl Protein ID

BGIOSGA034343-PA

Length

2470

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:4818249..4820718

Sequence Coding Region

4818868..4820718,4818518..4818767),complement(4818249..4818388

Genome Context

<gbrowseImage1> name=IndicaChromosome11:4818249..4820718 source=RiceIndica11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome11:4818249..4820718 source=RiceIndica11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAAGCGGCGAAAAATTCACAAATCGACAGCAAGCCGGGGGCTCAGATCCGGCGTGCAATCCCCAAAAAATCCAGGGAAGAGAGCAGCGAGTCGGAGCGGCGCCTCCTCCTCCGATGGCCCCCGCTTCGGCAGATTCACCTGTTACCACGGGGAGGAGGAGAAGCGATGGCACCCTCCGCCCAACGAAATCCTCCGGTCCATACAGAAGCTGTACGACGAGGCGGCGCGGCGGCTGCCCTTGGACGAGATCCCGGAGCTCGTCGACTGCCTCGGCGAGGTCGGACACTGCTTCGGCCTCGCCGACCCCGTCAGCAACATCATCCTCAACGCCATCGCCCACCTCTCCGGATCACCGCCCCTCCAACTCCAAGACCACCCACCGCCGCTCCCCCGGAAGAGGACCCGCAGGAGCTACAGCGAGTGGTGGGGGTTCATCTCATCCACCTCTCTCAACGGCCTCATCGCCTTCATGAAGGTCTATTTCCGCTACCTCACCGGCGACCAGGCCAGGCGCTACCTCTACCTCGCCTCCTACGACCTCCTCCTCGCCATCAAGTTGGTCCACCATGACCGCCATCTCCCACTCCCGCCATCCTCCCTCCTCCCCGACGGTGGCAAGATGAAGAACGCCCTCCGGATCGCCGCGCTCAAAGCAGGCCACCCCGCGCCCGACGACCTGGCGCGCACCATGACCGCGCAGTACCCCTCTCATCTACTCTCCCCTATCGTCCACAAGCTTCAGGGGTCGGACCTGCTCACCACCCATGACGTCCAGTCCATCAAGGACCTGCTCCTCAACGCATTCCAATGGCCCCCGCCCAACATGGACTTCTTGTGCTGCCCAAATGGCGAGTCTTGTGCTCAAGCCGCCCCCGACCGTTTTGCTGGAATCTCACCAAATCATGTTCAATTTCAGAAACTCCTATACATCTCGGATCTTACGATAGATAGCGCAGCCATAGAGACAAAGCTATCAAAATGCGTAGCGAAAGTGCTTGGTGGTTGTGAAGAACATGGACATGTGAACTATGATGCCTCCCCGCCATGTGAGCACATATTGTCCCTGAACATGTGCCTCCTCGACACCATCCATTGCTTCTACATCAGGGCACTTGCCGTGCTGCCCCTGCCCGTATCCGATGACTCCATGCGCCGCGGACGCCTCCTCCGCGCAATCCTCATGTCTGGACAATGCTTCGGCCCCTTGGATCCCGTATCAAACATCATCATCAACACCCTCTGGTACGACGCCGCATACCCTCCCCTGTATCCAAAGGATGGCGGTGGCGGCGATTGTGAGGTTGAGTTGCCGCAGGATATCTCTGACACCCAAGCCATGTCTCGCATTGCATCCCGTTCCCTCAACGGCCTTGTCGCCCTACTCCGTGCCATCACCACCACCACCACTGGCTGCTCGCTCTCCAAGCATGAGGCCGTGGAGTACCTTTGGTCCAGGCAGTGTGACCTCACTGACAAGCTACAGCAGACGGTGATGACGAACAAGAACCCCTACTCTGCTGCAGCCAAGGCTTCAGAGCACCCGCAGCACACCATGCTTGGGTCATTCCTCATGTCCCTCTGCGGCGAGAAGCTTGATCGCCTGCGGCACTTGCTGAGATCCATTAGTGATGGCTCCGGCTGTGTAATCTCCAACGCTGATTGGGAGCAGCTTAACGCAATGATCCAAGAGCAGCTAACCACGATGATTGGCAGAAAAAGACTGCCTCCATTTGATACACAAGCTTTAGCAGCATTATCGAGGAGAAGGTCAGACTATGTGAACCGGCAAAGGTTTGTTCGCAGCAAGCTGGAAGAATTGCTAGTCACATACTCCAGACAGCATCCTTGGGAACCAAGATATAAGCTTGACCTCATATGTGGAGTGGAGGAACCTCAATCCCACTACTGGAGATGCTACCATGCTAACTTCTTGGCAAGCACCCATGGCACTGTGCTCAAACTAAATCGTGAGGCAACCACAACACCAAACCCTGTGCGCACACTCTTCTTCGCTCAATTCTGGGACTCGCAACCTGGTCGATTCAATGAATCAAACTCAAAGACCATCTGCTGCCCTGTTCAAGTTAGCACATGTTTTGGTCGTTGCACCTTTTGTGATGAAGCAAGCAAAATTTTACATCCACCATGTCTATCTGGAAGTTATCCTGATGATGGTGATGATGCCGTCATTCATGACTACGATGTTACTGATGCCATTCTTATGTATGGTTCTGTTTAA</cdnaseq>

Protein Sequence

<aaseq>MKRRKIHKSTASRGLRSGVQSPKNPGKRAASRSGASSSDGPRFGRFTCYHGEEEKRWHPPPNEILRSIQKLYDEAARRLPLDEIPELVDCLGEVGHCFGLADPVSNIILNAIAHLSGSPPLQLQDHPPPLPRKRTRRSYSEWWGFISSTSLNGLIAFMKVYFRYLTGDQARRYLYLASYDLLLAIKLVHHDRHLPLPPSSLLPDGGKMKNALRIAALKAGHPAPDDLARTMTAQYPSHLLSPIVHKLQGSDLLTTHDVQSIKDLLLNAFQWPPPNMDFLCCPNGESCAQAAPDRFAGISPNHVQFQKLLYISDLTIDSAAIETKLSKCVAKVLGGCEEHGHVNYDASPPCEHILSLNMCLLDTIHCFYIRALAVLPLPVSDDSMRRGRLLRAILMSGQCFGPLDPVSNIIINTLWYDAAYPPLYPKDGGGGDCEVELPQDISDTQAMSRIASRSLNGLVALLRAITTTTTGCSLSKHEAVEYLWSRQCDLTDKLQQTVMTNKNPYSAAAKASEHPQHTMLGSFLMSLCGEKLDRLRHLLRSISDGSGCVISNADWEQLNAMIQEQLTTMIGRKRLPPFDTQALAALSRRRSDYVNRQRFVRSKLEELLVTYSRQHPWEPRYKLDLICGVEEPQSHYWRCYHANFLASTHGTVLKLNREATTTPNPVRTLFFAQFWDSQPGRFNESNSKTICCPVQVSTCFGRCTFCDEASKILHPPCLSGSYPDDGDDAVIHDYDVTDAILMYGSV</aaseq>

Gene Sequence

<dnaseqindica>1..1851#1952..2201#2331..2470#ATGAAGCGGCGAAAAATTCACAAATCGACAGCAAGCCGGGGGCTCAGATCCGGCGTGCAATCCCCAAAAAATCCAGGGAAGAGAGCAGCGAGTCGGAGCGGCGCCTCCTCCTCCGATGGCCCCCGCTTCGGCAGATTCACCTGTTACCACGGGGAGGAGGAGAAGCGATGGCACCCTCCGCCCAACGAAATCCTCCGGTCCATACAGAAGCTGTACGACGAGGCGGCGCGGCGGCTGCCCTTGGACGAGATCCCGGAGCTCGTCGACTGCCTCGGCGAGGTCGGACACTGCTTCGGCCTCGCCGACCCCGTCAGCAACATCATCCTCAACGCCATCGCCCACCTCTCCGGATCACCGCCCCTCCAACTCCAAGACCACCCACCGCCGCTCCCCCGGAAGAGGACCCGCAGGAGCTACAGCGAGTGGTGGGGGTTCATCTCATCCACCTCTCTCAACGGCCTCATCGCCTTCATGAAGGTCTATTTCCGCTACCTCACCGGCGACCAGGCCAGGCGCTACCTCTACCTCGCCTCCTACGACCTCCTCCTCGCCATCAAGTTGGTCCACCATGACCGCCATCTCCCACTCCCGCCATCCTCCCTCCTCCCCGACGGTGGCAAGATGAAGAACGCCCTCCGGATCGCCGCGCTCAAAGCAGGCCACCCCGCGCCCGACGACCTGGCGCGCACCATGACCGCGCAGTACCCCTCTCATCTACTCTCCCCTATCGTCCACAAGCTTCAGGGGTCGGACCTGCTCACCACCCATGACGTCCAGTCCATCAAGGACCTGCTCCTCAACGCATTCCAATGGCCCCCGCCCAACATGGACTTCTTGTGCTGCCCAAATGGCGAGTCTTGTGCTCAAGCCGCCCCCGACCGTTTTGCTGGAATCTCACCAAATCATGTTCAATTTCAGAAACTCCTATACATCTCGGATCTTACGATAGATAGCGCAGCCATAGAGACAAAGCTATCAAAATGCGTAGCGAAAGTGCTTGGTGGTTGTGAAGAACATGGACATGTGAACTATGATGCCTCCCCGCCATGTGAGCACATATTGTCCCTGAACATGTGCCTCCTCGACACCATCCATTGCTTCTACATCAGGGCACTTGCCGTGCTGCCCCTGCCCGTATCCGATGACTCCATGCGCCGCGGACGCCTCCTCCGCGCAATCCTCATGTCTGGACAATGCTTCGGCCCCTTGGATCCCGTATCAAACATCATCATCAACACCCTCTGGTACGACGCCGCATACCCTCCCCTGTATCCAAAGGATGGCGGTGGCGGCGATTGTGAGGTTGAGTTGCCGCAGGATATCTCTGACACCCAAGCCATGTCTCGCATTGCATCCCGTTCCCTCAACGGCCTTGTCGCCCTACTCCGTGCCATCACCACCACCACCACTGGCTGCTCGCTCTCCAAGCATGAGGCCGTGGAGTACCTTTGGTCCAGGCAGTGTGACCTCACTGACAAGCTACAGCAGACGGTGATGACGAACAAGAACCCCTACTCTGCTGCAGCCAAGGCTTCAGAGCACCCGCAGCACACCATGCTTGGGTCATTCCTCATGTCCCTCTGCGGCGAGAAGCTTGATCGCCTGCGGCACTTGCTGAGATCCATTAGTGATGGCTCCGGCTGTGTAATCTCCAACGCTGATTGGGAGCAGCTTAACGCAATGATCCAAGAGCAGCTAACCACGATGATTGGCAGAAAAAGACTGCCTCCATTTGATACACAAGCTTTAGCAGCATTATCGAGGAGAAGGTCAGACTATGTGAACCGGCAAAGGTTTGTTCGCAGCAAGCTGGAAGAATTGCTAGTCACATACTCCAGACAGCATCCTTGGGTAAATTTAGAGTATAAACGTTTTTTTATTTTTGTTTGATTGCTGCATTTGCTTTCTTCCAGTGTGCTAAGACTTCGTCTACCCTTGTTTGTTATTGCAGGAACCAAGATATAAGCTTGACCTCATATGTGGAGTGGAGGAACCTCAATCCCACTACTGGAGATGCTACCATGCTAACTTCTTGGCAAGCACCCATGGCACTGTGCTCAAACTAAATCGTGAGGCAACCACAACACCAAACCCTGTGCGCACACTCTTCTTCGCTCAATTCTGGGACTCGCAACCTGGTCGATTCAATGAATCAAACTCAAAGACCATCTGCTGCCCTGTTCAAGTTAGCACATGTTTTGGTGAGTCACTGAACTCTTTTTGTGATGCTCCTACTATATTTTAGTCAAGTAATAGACACATTGTGGCAATCATTATTGCTTTTGCATGCATGTTAATACCCTGGATTGTAATTTTGGCTTTTCTGACAGGTCGTTGCACCTTTTGTGATGAAGCAAGCAAAATTTTACATCCACCATGTCTATCTGGAAGTTATCCTGATGATGGTGATGATGCCGTCATTCATGACTACGATGTTACTGATGCCATTCTTATGTATGGTTCTGTTTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA034343