BGIOSGA034418

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Revision as of 08:51, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA034418| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA034418, complete gene.| tag = OS11G01...")
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Gene Name

BGIOSGA034418

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA034418, complete gene.

LocusTag

OS11G0171700

Ensembl Transcript ID

BGIOSGA034418-TA

Ensembl Protein ID

BGIOSGA034418-PA

Length

5490

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:3259851..3265340

Sequence Coding Region

3265055..3265340,3264617..3264813),complement(3264467..3264526,3261509..3263479),complement(3261260..3261410
,3260265..3260650),complement(3259851..3260138

Genome Context

<gbrowseImage1> name=IndicaChromosome11:3259851..3265340 source=RiceIndica11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome11:3259851..3265340 source=RiceIndica11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGTCGGCGGCGGCGGAGGGGGAGGAGGCCCCGATCGCGGCGTTCGCGGTGTCCAAGGGGGGAGTCGTGCTGAAGAACATCTTCCTCAACGCGCCCCCGTCGCCGCTGCCTGTGGAGGAGGCGGCGCGGGGGCGGGGTGGGGAGGAGGAGGATCCGCCGGTGATGTTCGGGCGGCACCCGGAGTGCCACGTCCTCGTCGACCACCCCAGCGTCAGCAGGTTCCACCTCGAGGTCCGCTCCCGCCGCCGCCAGCGGCGGATCACCGTCACCGACCTCTCCTCCGTGCATGGGACTTGGATCTCGGGACGAAGGATCCCACCGAACACTCCGGTGGAGCTGACAGCCGGTGATGTACTGCGGCTTGGGGGCTCGAGGAGGGAATACCGGCTTCACTGGCTGTCGCTCCGGGAAGCATTTGACATGGAGGATCTGCTGCCACCGCTGCTGGAGGAGGATAAGGAGGAGCTTAGTACTTGTCAGGAGGCAAGCAAGCAGTTGGAGCCTGATCAAAAGGAGTCAGCGGATACTGAGACTCATCAGGAGACAAGCCAACAAGTTGTGTCAGAACAAATTGATTTTCATGCTAATGTGATTCCCTCAGCACCACCTATACCTGAGTTCGCTGATTTATTTGCTCTGGAAGAATCTTCAGTTCCAGAATTTGATGACAGCAGAGAGGGAAGGATTGAGGGAAATTTGATTGAAGAGAACCATGTTATATATTCTGTTGAATCTTCGATTACACAACCAATGCTTGCCACAGTGGAAGATGCTGGAAGATCAGTCAAGTCAGGCGAAAAGGACACTTCAAATGCCAGGAGGTCCAAGTTGAAGTCAGTCAAAACCCTCCGCATTGAAACTGGCAGAAGCAAGGAAAGAATTACTCCTTTGAGTTACAGCTATCAGAAAGAAGAAAACCAAAATGAGAATCCTATATGTTCTCAGAACTGTGGGATAGAATGTGAAGCCTGCATGGTTTTGTTTAATAATTCTTATGTCGGAGAAGCTGAAGAAAAGGAAAAGATGAATATCTTGGACAGAATTATGATGGAGGAGAATCAGGAACAGACAAATCATCTTCAATCCAAAGAATTTGTGCATTATGTTGCCCCTCTGAATTTGGACTATGAAACATTTTCAGATAATGAAAACTGCGTGCTGAGTGTTGCTAAGGAGACAGAGCATAATGATTTCAACCCTGTGAATTGTATCTCACAAGATTCAGTTTGTGAAAATCCACAGAAGATATCAGAATTATTGCATTCTGTTTCCCCTCTGGTTTTCAAAGGCGATGACTTCACTGACAGCAAAATCCTACAGCTTTGTGCTTCTGTACATAAGGAGTTGTCTGGGCCCATCTTAGAAAATCCATTCATGCAAGACATATCTGATGAAAATACAAACAGCAACAAAGACACAGGGCATGAAGGTTTAACCCTTCTTAACTTGGATGCAACTCTCACAAGCAATGAGAATTTTGCTCAAAGTAAGATTTTTGTGGCTCCTGAGGACTCTGAGAGTGAAGGCACAATCAATGAGAATCTATTTGAAATTTCGAACATGAAAGGAAATGAAGAAAATGAAGAGAACAGTCCATGGGACAAGGAGAACATCACCCCCTTTGTCTCAGGAGATATAATAGTGGAGAGAAGTCAGCTAAGGTTGAAGCCCACTACCATTTCCCAAGAATTGATGGATTCCATTTCCCCTCTTAATTTGGAACATAACGACTTTTCAGATGATGAAAATTCCATATTGAGCATTGGAGAACAGATGAATTCAAATGAACTTATCGCCAAGAATCTTATCCCGCTAACTTCAGTTGATGCAAATATGCAGAAGAGCCATGCAGGGTTTATGCCAATTGCACATCTAGATTTCAAAGATAGCATCCTTACAGACGAGGAAACCTCAGTGCTTTCTCCTGAAAAGTATGATACTATATCCCCTGTGAGACAAGGAAACCTGTTCCCAGACAAAGAGAATGTGACACCAGCCTCCAGGGATCTGAAGCCCATCATTGGTAGGAAGGTTCTTGGACCAAGGGTGGATAATTCGCTGTCTGTAGAATGCACTTCAAAAAGGAGGATCCATAGACAAGAACCCAATGAATTATCAGCAAAGTCCAAAGTTTGTCACGCAGTAGATGATGATGTTTTCTATTCTGATAAGGAAAATTTGACACCTATATCTTCAGGAGGCATTAAAGCAAGGAGATGTCTTCCAAAGAGCCTCACAGTGGATGCTGACCAAGATCAAGAGGCCTTCTACTCTGACAAAGAGAACTTGACGCCAGTATCTTCTGCTTCTCGGAAAACAAAGGATTTGTCTGAAAACCGTGCACGAATGGAAAGTACTATCACAAAGAAAAGGGTGGTTGATAGGCTCCCCTTCCAGACACTCTTGTCGAATTCTCCCTTAAGACACACTAGTTCACTTGATAGTACCCAGGTTAATCCTAGAGCAGTTGATGTGGCAATGAAGTTGGAGGGTGAACTGAATAATGTTCCACACAAAGGACAAGAGTCTGAAAAGACCAAAGAAGGAATGAAAGTCTGGACCATGGTAACTGATATGGAATGTCTTCTTGATGATGAATCTAGGAAGTCCATCATGCTGCTAAGAGGCTTAAAAGGAACTCAATTGGTCATACCAATGATTGTGATCAGGGAGCTTGAGTGCTTGAAAAAGCGGGAGAGATTGTTCAGAATGTTATCAAAGGCCACCTCCATGCTCCAATGGATCAATGAGTGCATGGAAAAGGAGAGCTGGTGGATCCATGTTCAGAGTTCAACCGAGATGCTGCCAGTAGCACCAACTCCACCTGCAACCCCTACAGCGCTATGCAACAATGGAGAAAGAGAAATCTCTGCCGGCACCTTCAATCCGATAGCCTTGTTCTCCCCGAGAAGCTTCTCAGATATCGTCTCCCCGAAAACAGAAGATCGCGTTCTTGACTGCGCCCTCCTTTTCAACAAACTAAAAGGAAACCAGAACATCGTCATCCTGTCCAACAGCGTCACGCTTAAGATCAAAGCTATGGCAGAGGGATTCCCTTGCGAGGGAGCAAAGGAATTCAGGGAGACCCTGGTGAACCCGTGCTCCAGCAGGTTCATGTGGGCGGCCAGCGCGCCGAGAGGTTCAGCCTGGTCGTGCCTGGACGAGACTACCCTGGAGGAGAACTACTACAACAGCCACCATGGAGCCAGGAGGAGGATCCCAAGGCCCATGGAGCCCGCCAAGGGCCTGAAGCTGATCCTGCTGCACAATTCTCACTATGGGCAGGCGACGAACTTCGTCGAGAATCGGCCATTGGCTCCAATGGCCTCGTGGTGA</cdnaseq>

Protein Sequence

<aaseq>MASAAAEGEEAPIAAFAVSKGGVVLKNIFLNAPPSPLPVEEAARGRGGEEEDPPVMFGRHPECHVLVDHPSVSRFHLEVRSRRRQRRITVTDLSSVHGTWISGRRIPPNTPVELTAGDVLRLGGSRREYRLHWLSLREAFDMEDLLPPLLEEDKEELSTCQEASKQLEPDQKESADTETHQETSQQVVSEQIDFHANVIPSAPPIPEFADLFALEESSVPEFDDSREGRIEGNLIEENHVIYSVESSITQPMLATVEDAGRSVKSGEKDTSNARRSKLKSVKTLRIETGRSKERITPLSYSYQKEENQNENPICSQNCGIECEACMVLFNNSYVGEAEEKEKMNILDRIMMEENQEQTNHLQSKEFVHYVAPLNLDYETFSDNENCVLSVAKETEHNDFNPVNCISQDSVCENPQKISELLHSVSPLVFKGDDFTDSKILQLCASVHKELSGPILENPFMQDISDENTNSNKDTGHEGLTLLNLDATLTSNENFAQSKIFVAPEDSESEGTINENLFEISNMKGNEENEENSPWDKENITPFVSGDIIVERSQLRLKPTTISQELMDSISPLNLEHNDFSDDENSILSIGEQMNSNELIAKNLIPLTSVDANMQKSHAGFMPIAHLDFKDSILTDEETSVLSPEKYDTISPVRQGNLFPDKENVTPASRDLKPIIGRKVLGPRVDNSLSVECTSKRRIHRQEPNELSAKSKVCHAVDDDVFYSDKENLTPISSGGIKARRCLPKSLTVDADQDQEAFYSDKENLTPVSSASRKTKDLSENRARMESTITKKRVVDRLPFQTLLSNSPLRHTSSLDSTQVNPRAVDVAMKLEGELNNVPHKGQESEKTKEGMKVWTMVTDMECLLDDESRKSIMLLRGLKGTQLVIPMIVIRELECLKKRERLFRMLSKATSMLQWINECMEKESWWIHVQSSTEMLPVAPTPPATPTALCNNGEREISAGTFNPIALFSPRSFSDIVSPKTEDRVLDCALLFNKLKGNQNIVILSNSVTLKIKAMAEGFPCEGAKEFRETLVNPCSSRFMWAASAPRGSAWSCLDETTLEENYYNSHHGARRRIPRPMEPAKGLKLILLHNSHYGQATNFVENRPLAPMASW</aaseq>

Gene Sequence

<dnaseqindica>1..286#528..724#815..874#1862..3832#3931..4081#4691..5076#5203..5490#ATGGCGTCGGCGGCGGCGGAGGGGGAGGAGGCCCCGATCGCGGCGTTCGCGGTGTCCAAGGGGGGAGTCGTGCTGAAGAACATCTTCCTCAACGCGCCCCCGTCGCCGCTGCCTGTGGAGGAGGCGGCGCGGGGGCGGGGTGGGGAGGAGGAGGATCCGCCGGTGATGTTCGGGCGGCACCCGGAGTGCCACGTCCTCGTCGACCACCCCAGCGTCAGCAGGTTCCACCTCGAGGTCCGCTCCCGCCGCCGCCAGCGGCGGATCACCGTCACCGACCTCTCCTCCGGTGAGATTCCGCTCCTCCCCCGCGCCTCTCGCTCCGTCTCTCCCTCGATCTCCCTGTGCGCGTGGCTGGTTTTGATTGAGGCTTCATTTGGGGATTTTTGGTGGACGCGTGCGTTAGCTCATTTCGATTATCACTCGATTAGCTCCTGCGATGATGGCGAATATTTGCTTGCGATTTGGATCAAAATGAGGCAAAAGCTAACATGGCATTGACCCATTTTTGTCCTGTGAATTTTACACAGTGCATGGGACTTGGATCTCGGGACGAAGGATCCCACCGAACACTCCGGTGGAGCTGACAGCCGGTGATGTACTGCGGCTTGGGGGCTCGAGGAGGGAATACCGGCTTCACTGGCTGTCGCTCCGGGAAGCATTTGACATGGAGGATCTGCTGCCACCGCTGCTGGAGGAGGATAAGGAGGAGCTTAGTACTTGTCAGGTAGCAGATTCTCTATTCTGATCAGTGCCATAGCTGTGATTATTTTGGGGGCATGGTTGTTGCAATATAAGTGTTTGTTGAAATGCTCAGGAGGCAAGCAAGCAGTTGGAGCCTGATCAAAAGGAGTCAGCGGATACTGAGACTCATCAGGTCTGATCCCCGTAAACTCATGTAACTGGATGCTGAAATTATCAGTGTGTTTTGTCATGTTATCATGTTCTATAGTTTGGTAGAATTCTGGACATATGTGTTGAGCGTTTTGAAACGCTAAGCAATAGGCTTGATTGCCGAAATTCATATGATGCAGGCGATAGAAATGTCCTTGGCTGCTGCTGATTGCCAAAATAATAAAATACATGCTAAATTCTTTCATGGCAAATGACTATTAGCTCATCCACTTTATTGATACTCTATGCTCACAGTTTTATGAAATGCATTACAAACTATTTTGAAGTCTAATATGTGCTACTGGATTCCCTGTTTGCTCTGCTCTGTTAATTCTTAACTGATAGCTAAATAATCCAGTACCCAGCAATTTTGAATTAGTAGTTGCTTAGAGTAGTGCCCCTGCCCCTTTCATTGGAAATGTCAAGTTTCTAATAAACGATGACTTTTAGCTGCTTTTGCTATACACTGTCGTTCTGGAGTTCTGCCTAATGCTATTTTAGTGATGCTTTTACCATCTATAGAAATCTTCTGCGTTGTGGTTTTGAAAATCTCGGCCACTTCATAATGGCCTAAATGCGTTGTGCATGTGAGCAGATTAGGGTAAAAATCTATGTGTTATATTGGGAGCTGCTGATTATATTGTGCACTATCTAAATTGCTCCAAAGTGATTTCATATGGCTTGCGAATGGTTGTTACTTTAGATGCATTGATTATAAAAATAACTTTCATCTCATGCTAAACAATTAGTTTGGCTATTTGTCTGAATGTTATACGCCCATGTGTTGCACTGGATGCATGGTATATATTTTGCATGTTGAAGTTAAATCCTACCAAATCAAAATCTCCATTGCTTACAGTCAAATACTAATCGCACTGTTGACTTAGGTTCTACTACTTGATTTTCTTTCTTTCCCTTTGGAATTTTGAGTTCATATTCTGGAAGGCTAACTATCTGATATAATTCTCAGGAGACAAGCCAACAAGTTGTGTCAGAACAAATTGATTTTCATGCTAATGTGATTCCCTCAGCACCACCTATACCTGAGTTCGCTGATTTATTTGCTCTGGAAGAATCTTCAGTTCCAGAATTTGATGACAGCAGAGAGGGAAGGATTGAGGGAAATTTGATTGAAGAGAACCATGTTATATATTCTGTTGAATCTTCGATTACACAACCAATGCTTGCCACAGTGGAAGATGCTGGAAGATCAGTCAAGTCAGGCGAAAAGGACACTTCAAATGCCAGGAGGTCCAAGTTGAAGTCAGTCAAAACCCTCCGCATTGAAACTGGCAGAAGCAAGGAAAGAATTACTCCTTTGAGTTACAGCTATCAGAAAGAAGAAAACCAAAATGAGAATCCTATATGTTCTCAGAACTGTGGGATAGAATGTGAAGCCTGCATGGTTTTGTTTAATAATTCTTATGTCGGAGAAGCTGAAGAAAAGGAAAAGATGAATATCTTGGACAGAATTATGATGGAGGAGAATCAGGAACAGACAAATCATCTTCAATCCAAAGAATTTGTGCATTATGTTGCCCCTCTGAATTTGGACTATGAAACATTTTCAGATAATGAAAACTGCGTGCTGAGTGTTGCTAAGGAGACAGAGCATAATGATTTCAACCCTGTGAATTGTATCTCACAAGATTCAGTTTGTGAAAATCCACAGAAGATATCAGAATTATTGCATTCTGTTTCCCCTCTGGTTTTCAAAGGCGATGACTTCACTGACAGCAAAATCCTACAGCTTTGTGCTTCTGTACATAAGGAGTTGTCTGGGCCCATCTTAGAAAATCCATTCATGCAAGACATATCTGATGAAAATACAAACAGCAACAAAGACACAGGGCATGAAGGTTTAACCCTTCTTAACTTGGATGCAACTCTCACAAGCAATGAGAATTTTGCTCAAAGTAAGATTTTTGTGGCTCCTGAGGACTCTGAGAGTGAAGGCACAATCAATGAGAATCTATTTGAAATTTCGAACATGAAAGGAAATGAAGAAAATGAAGAGAACAGTCCATGGGACAAGGAGAACATCACCCCCTTTGTCTCAGGAGATATAATAGTGGAGAGAAGTCAGCTAAGGTTGAAGCCCACTACCATTTCCCAAGAATTGATGGATTCCATTTCCCCTCTTAATTTGGAACATAACGACTTTTCAGATGATGAAAATTCCATATTGAGCATTGGAGAACAGATGAATTCAAATGAACTTATCGCCAAGAATCTTATCCCGCTAACTTCAGTTGATGCAAATATGCAGAAGAGCCATGCAGGGTTTATGCCAATTGCACATCTAGATTTCAAAGATAGCATCCTTACAGACGAGGAAACCTCAGTGCTTTCTCCTGAAAAGTATGATACTATATCCCCTGTGAGACAAGGAAACCTGTTCCCAGACAAAGAGAATGTGACACCAGCCTCCAGGGATCTGAAGCCCATCATTGGTAGGAAGGTTCTTGGACCAAGGGTGGATAATTCGCTGTCTGTAGAATGCACTTCAAAAAGGAGGATCCATAGACAAGAACCCAATGAATTATCAGCAAAGTCCAAAGTTTGTCACGCAGTAGATGATGATGTTTTCTATTCTGATAAGGAAAATTTGACACCTATATCTTCAGGAGGCATTAAAGCAAGGAGATGTCTTCCAAAGAGCCTCACAGTGGATGCTGACCAAGATCAAGAGGCCTTCTACTCTGACAAAGAGAACTTGACGCCAGTATCTTCTGCTTCTCGGAAAACAAAGGATTTGTCTGAAAACCGTGCACGAATGGAAAGTACTATCACAAAGAAAAGGGTGGTTGATAGGCTCCCCTTCCAGACACTCTTGTCGAATTCTCCCTTAAGACACACTAGTTCACTTGATAGTACCCAGGTTAATCCTAGAGCAGTTGATGTGGCAATGAAGTTGGAGGGTGAACTGAATAATGTTCCAGTAAGTTCTTGTCAATAATATTCCATTTTTTACATATTTTTTCCCTTTTTTTCTTCTGATAAGGAATCTGAACTAAGTTAATTTTTGTTGCTGAACAGCACAAAGGACAAGAGTCTGAAAAGACCAAAGAAGGAATGAAAGTCTGGACCATGGTAACTGATATGGAATGTCTTCTTGATGATGAATCTAGGAAGTCCATCATGCTGCTAAGAGGCTTAAAAGGAACTCAATTGGTCATACCAATGATTGGTAAGGAGCTTTATCATAGTAAATTTTTCACCCGTCCACCTACCTTTCGGTCTACTAGACATTTAACCAATGCTTTAACTTGGTTGCCTGCAATATCTTCCAGCGTATATTCTTTTTATGTACTGTTTATATCTGAATTCATGATCTGTCATTCTGTCGTGCTGCTTAGTTCTAACAAATATGCCATGCTAGATTTTACTACCTGTAATCCATGGATTTTGTGATGTTGAGTGAATGACAAGTTGCTTCTGTAGCTTTAACTGTCTTGCTATTCTCTTACAACCTCTGCCCCAAAATATAAGGGCTTTTGGCTATGCATTTATATTGCCAAAAGCCCTTATATTTTGGGATGGAGATAGTACTAAATAGATGCATTAACCTTGTATGTTTGGTTCTTGTGCTGTTTAGCATGCGCACGCTCACCTATGTATAAAGTGGTCCATTGCATTGCATTTCTCACTATGTTTGTCGCTCACAGTGCAATATGCTTTATTGAGTTTAGTGCAGTTGTCACTTGTAATCCATACCCTTGTTTTTAACTGAACCGACTGCATCTTCCATGCTATGCTTCTTGTTTGTTAGCTGAAAGCTTGTTTACCCTTTTGTCAGTGATCAGGGAGCTTGAGTGCTTGAAAAAGCGGGAGAGATTGTTCAGAATGTTATCAAAGGCCACCTCCATGCTCCAATGGATCAATGAGTGCATGGAAAAGGAGAGCTGGTGGATCCATGTTCAGAGTTCAACCGAGATGCTGCCAGTAGCACCAACTCCACCTGCAACCCCTACAGCGCTATGCAACAATGGAGAAAGAGAAATCTCTGCCGGCACCTTCAATCCGATAGCCTTGTTCTCCCCGAGAAGCTTCTCAGATATCGTCTCCCCGAAAACAGAAGATCGCGTTCTTGACTGCGCCCTCCTTTTCAACAAACTAAAAGGAAACCAGAACATCGTCATCCTGTCCAACAGCGTCACGCTTAAGATCAAAGCTATGGCAGAGGTAACCTTAAACTCCTTAACTTGACTCGGTCCTTGCAGTTCATGCAAATTAGAGCCACTGAACCAGAGTATAAACCATACTCCACCCATTTAAAATTGAGTTCATTGTGTTTCTGTCTTATTGAAGGGATTCCCTTGCGAGGGAGCAAAGGAATTCAGGGAGACCCTGGTGAACCCGTGCTCCAGCAGGTTCATGTGGGCGGCCAGCGCGCCGAGAGGTTCAGCCTGGTCGTGCCTGGACGAGACTACCCTGGAGGAGAACTACTACAACAGCCACCATGGAGCCAGGAGGAGGATCCCAAGGCCCATGGAGCCCGCCAAGGGCCTGAAGCTGATCCTGCTGCACAATTCTCACTATGGGCAGGCGACGAACTTCGTCGAGAATCGGCCATTGGCTCCAATGGCCTCGTGGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA034418