BGIOSGA034437

From RiceWiki
Revision as of 08:52, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA034437| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA034437, complete gene.| tag = OS11G01...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA034437

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA034437, complete gene.

LocusTag

OS11G0166800

Ensembl Transcript ID

BGIOSGA034437-TA

Ensembl Protein ID

BGIOSGA034437-PA

Length

2474

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:3051750..3054223

Sequence Coding Region

3053882..3054223,3053714..3053782),complement(3053508..3053590,3053316..3053389),complement(3053140..3053192
,3052736..3052775),complement(3052481..3052623,3052036..3052132),complement(3051750..3051865

Genome Context

<gbrowseImage1> name=IndicaChromosome11:3051750..3054223 source=RiceIndica11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome11:3051750..3054223 source=RiceIndica11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGATCGGGACGACGAGCGGCTCGGCCGCGCGCTGGCGGCGTTTGGAGGCGGCGGCGGCGGCGGCGGCGGCGTGTGGGAGCTCGTGGACGCCGCGCTGGCCTGTGCCGCACGCGACCGCCCCGACGAGCTGCGCGCGCGGCGCGACGGTATCGTGGAGCGGCTCTACGCCGCCGCCGGCGGCGGCGGCGGCAACTGCGGCGCGGCGGCGGCGACTACGCCGTCGCCGCGTGGGGCGGCGGTGGCGGAGGGTGAGGACGACGACGACGAGGCGGCGGCGGCGGCGGACGGCCTCGAGATCAAGATCCTGGCAATCAAGGACTTCTTGGAGGACGAAGACCAGTCGGAGGACGAGCTGCTGAGCTTGCTGCAGAGCCTGGCAGACATGGACATCACGTACAAGGCGCTCCAGGAGACTGACATCGGACGGCATGTGAATGGTCTGCGCAAACATCCCTCCGGTGAAGTCCGGCTACTTGTCAAGCAGCTCATCAGGAAGTGGAAGGAGATAGTGGACGATTGGGTGCGGTTACACAATTCCAGCGGTGACGCCAGCAACTCGATCATCACCGATGGCAACTCCCCGGAGAAAATCCAAGGCAAGAACCAGCAAAGCTCTCAGGTTTCAGAGTTCAAGTATTCCCCCAGCCCAAGTAGGCATAACAACTCAAGCTCAGAGAGGGTTAGCAATGGGATCGCGTCGATAGCAGCGACAAAACATAGAGCAAGCCCTGCGCCAGCGCATCATAATGCAAGGCAGATCAACAACACCCACCATTCTACTACTTCATCTTCTGCTCCAGCTAGGATGGTGAAGGAACAGAAGGACAGTCATCTTGACCTTGAAAGGCTGGACTCTGCGAGGAAGAGACTCCAGGAGAATTACCAGGAAGCACAAAATGCAAAAAAACAGAGGACGATTCAGGTGATGGACATCAATGAAATTCCGAAGCCGAAAAATAGAAATGCCTTCATCCGCAAGGGCAATGGGGGTGGGTTCCCAGCAAGGCACCGGTGA</cdnaseq>

Protein Sequence

<aaseq>MDRDDERLGRALAAFGGGGGGGGGVWELVDAALACAARDRPDELRARRDGIVERLYAAAGGGGGNCGAAAATTPSPRGAAVAEGEDDDDEAAAAADGLEIKILAIKDFLEDEDQSEDELLSLLQSLADMDITYKALQETDIGRHVNGLRKHPSGEVRLLVKQLIRKWKEIVDDWVRLHNSSGDASNSIITDGNSPEKIQGKNQQSSQVSEFKYSPSPSRHNNSSSERVSNGIASIAATKHRASPAPAHHNARQINNTHHSTTSSSAPARMVKEQKDSHLDLERLDSARKRLQENYQEAQNAKKQRTIQVMDINEIPKPKNRNAFIRKGNGGGFPARHR</aaseq>

Gene Sequence

<dnaseqindica>1..342#442..510#634..716#835..908#1032..1084#1449..1488#1601..1743#2092..2188#2359..2474#ATGGATCGGGACGACGAGCGGCTCGGCCGCGCGCTGGCGGCGTTTGGAGGCGGCGGCGGCGGCGGCGGCGGCGTGTGGGAGCTCGTGGACGCCGCGCTGGCCTGTGCCGCACGCGACCGCCCCGACGAGCTGCGCGCGCGGCGCGACGGTATCGTGGAGCGGCTCTACGCCGCCGCCGGCGGCGGCGGCGGCAACTGCGGCGCGGCGGCGGCGACTACGCCGTCGCCGCGTGGGGCGGCGGTGGCGGAGGGTGAGGACGACGACGACGAGGCGGCGGCGGCGGCGGACGGCCTCGAGATCAAGATCCTGGCAATCAAGGACTTCTTGGAGGACGAAGACCAGGTCCTCAAACAATCCATTTTCTTCTCTTTTTTTTAATTCGCTCAAAGAAACCGCAGAAATCTGACACGAGCTGCACGTTTTTGGTTTGCTTCCTCGCAGTCGGAGGACGAGCTGCTGAGCTTGCTGCAGAGCCTGGCAGACATGGACATCACGTACAAGGCGCTCCAGGTGAAAACAAAAGCTTTTTTACCCCCATCTTCTTCTTTCACCTTCACTGCTGTTCTCTTCTGTTCCCCTTGCAACAAAAGGAGATGAGATGAAGTTGGAAGTTCATGCTTTGTGCTTGTCCAGGAGACTGACATCGGACGGCATGTGAATGGTCTGCGCAAACATCCCTCCGGTGAAGTCCGGCTACTTGTCAAGCAGCTCATCAGGTGAGTAAGAAGAAGATGATGAACATGGATAAACACTATAGCCAAGTAGTGTTGTTGGAATATGCGGTTTAATTGTCCCTTTTTTTGGGTGAATTTTGGTGTTGGTTGCAACTTGAAGGAAGTGGAAGGAGATAGTGGACGATTGGGTGCGGTTACACAATTCCAGCGGTGACGCCAGCAACTCGATCATCAGTATGTCGCTGTGCAAAATATTTGCATTTGTCTTCGGCTCATGTTTCTTTCTTTTTTTCTTCTTTTACAATTCATGTTTTTGTTAATCCTGATGGGTTAAATCGGTTGCTTTGATGATGGCAGCCGATGGCAACTCCCCGGAGAAAATCCAAGGCAAGAACCAGCAAAGCTCTCAGGTAAACTGTTCTTGCTAACAAGTGGCTCTGAGCAACTGCACACCACAATCTTCTTTTAGTGATTCCCTTTCCCCATAGAAAGTTTCCTTTTAGTAACATGTCATTGTGCCCAGAATATTCCCTTCTCAATTATCCCCTGTTGGTTTACCAAACAAATACTACTACATTTCAGAGAAAAAGAAAGGGGGATTGCACATGCTTTTCTCATGCTGATTAAACTAAGAGATAATGCAAAACCAGTAATTATTAGTTGTAGTGACAGCACAGTTTGTACTTTAATACATCCTATATATACTTTTAACTTCTATTTTTTGGTTCCTAATTGTGTGACAATGACACCTCCTCTGCTGATGCAACCTTTCAGGTTTCAGAGTTCAAGTATTCCCCCAGCCCAAGTAGGCATAGTGAGTGTGACAAATACGCTACCTTCCATGGATTTCTTCAGATTTCACTGTTTTGAGTACCCATAATTACTGATTTCTTGTGACATGTTCCTTTTCTTTCTCTGGATTACAGACAACTCAAGCTCAGAGAGGGTTAGCAATGGGATCGCGTCGATAGCAGCGACAAAACATAGAGCAAGCCCTGCGCCAGCGCATCATAATGCAAGGCAGATCAACAACACCCACCATTCTACTACTTCATCTTCTGCTCCAGCTGTAAGGATGCAACCAGACCTTTCTTTCCATTTCCCCCTAAGTCCCTATTGTTGTCGGGCAGAGGTTGTGCACTGCATTTCGTTTAAAGTAGAAGTAGCACTATCAGCATGGACCCCGGATGTAGGATCTTTTGACTGATTCGTCTCACTTGTCACTACTCATTGTACAATGGTGTCTAATCATGCAACATGACAATAAAGGCTCCATGTTCCACTTTCAGTGAACAAAAGAGTGACTGTTACCACAAAGTTGGAAGCTTTTTTGAAATGTTTTATTCGTGTGCAGTGGGTGAGTGTTGTCATAGATAGATGTGAATGTCAGAATGATTTTGGTGGTTTTTTCATGCAGAGGATGGTGAAGGAACAGAAGGACAGTCATCTTGACCTTGAAAGGCTGGACTCTGCGAGGAAGAGACTCCAGGAGAATTACCAGGAAGCACAAAATGGTAAATTTACTAAAACTTTTTGTACACCTGCATTATAAGCACACTGCATAACAAGAATGTCAAATGGTTATATTTGAAAGCAATTTGTCAGGAATGGTCCTACAGGAACAGATTGAAAACAAATGTAAGTAGGTTAACATATTTTTATTTGCGGTTTCCATTTTTGGCAGCAAAAAAACAGAGGACGATTCAGGTGATGGACATCAATGAAATTCCGAAGCCGAAAAATAGAAATGCCTTCATCCGCAAGGGCAATGGGGGTGGGTTCCCAGCAAGGCACCGGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA034437