BGIOSGA034480

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Revision as of 08:52, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA034480| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA034480, complete gene.| tag = OsI_351...")
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Gene Name

BGIOSGA034480

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA034480, complete gene.

LocusTag

OsI_35143

Ensembl Transcript ID

BGIOSGA034480-TA

Ensembl Protein ID

BGIOSGA034480-PA

Length

5660

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:2242291..2247950

Sequence Coding Region

2247844..2247950,2247359..2247486),complement(2246974..2247112,2246628..2246755),complement(2246092..2246189
,2245790..2245936),complement(2244605..2244664,2244382..2244441),complement(2244227..2244304
,2244087..2244126),complement(2243712..2243983,2243230..2243469),complement(2242291..2242437

Genome Context

<gbrowseImage1> name=IndicaChromosome11:2242291..2247950 source=RiceIndica11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome11:2242291..2247950 source=RiceIndica11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGAGAAGCTAGCGGTAGTTCAGGACATCCAAGGCAGAATCCTCATGTTCTTGGCTATGGCTTCCATGGAGCTATGCCCAACTCCTTGCCTTCTGCAAACTTGTTCGAGCAGCAAGGAGGTGCTAACTATTTTGGAGAACTAGAAGAGGCTCTGATGCAACAGGTGGCCACACTCAGGAGGACTCAACAAACTGCAACCACCACCTCCACCCTTCATCATGGAGACACCACCCTACGAGTACCAGAGAGAGTGTCTACCAACTTTCTGGCTCCTGACTGCAAGCACAGCTCAAAGAGAATAAATTCCACTGACTTTCACTGTGACAGGGACCCCACACATTGTGATCCCAATGCAGCACTTTTCACACTCTGCGAGCAGCAAGGAGGTGCTAACTATTTTGGAGAACTAGAAGAGGCTCTGATGCAACAGGTGGCCACACTCAGGAGGACTCAACAAACTGCAACCACCACCTCCACCCTTCATCATGGAGACACCACCCCCTTCTCCACCACTGCTACTGCTGCGGCTACAGCTAGGCCTCCTCCTACACTGGACATCTTCCCATCCTGGCCTATGAGGTCTCTCCACACACCCAAGGAGGGTTCAAATGTGACAGCAGACACAACAGACTCGGAGAGCAGCAGCAAGAACAACAGCAACCAAAATGCCTCATCAGACCAGCATGTGCTAGTAGGAGACATGGCAGGCCAGTTCGACCAAATTCCACAGCAGGAACAACACAAGAAGATGGCAACTAACAGTCCCACTCATAGCAGCAAGACTGGCAAGGCGCTTGATCCAAAGACGATGAGAAGGCTCGCCCAGAACCGAGAAGCAGCACGGAAAAGCCGACTGCGAAAGAAGGCTTACATCCAGCAGCTTGAAAGCAGCAAGCTGAAGCTTGCTCAGATGGAACAGGATATCCACAGAGCTCGTTCCCAGGGCTTACTGCTTGGAGCTCCAGGTGGAAACACCAGCTCAGGTGCCACAATGTTCGACGTCGACTACGCCCGGTGGCTGGAGGAAGACAGCCGGCGCATGGCTGAACTGCACGGAGGGCTGCACGCACATCTGCCGGACAGCGACCTCAGAGCCATCGTCGACGACACGCTAACCCACTACGACCACCTCTTCAACCTCAAGGGCGTGGCGGCCAAGGCCGACGTGTTCCACCTCATCACCGGGATGTGGGCGACCCCAGCTGAGCGGTGCTTCCTCTGGATGGGCGGATTCCGGCCCTCCGAGCTGCTCAAGACATTGACACCCCAGCTGGATCCCCTGACTGAGCAGCAAGTGGTTGGTATCTGCAATCTTCAACAGTCATCGCAGCAGGCAGAGGAAGCTCTCTCCCAGGGCTTGGATCAGCTGCATCAGTCATTAGCAGAAACCGTGGCTGGAGGGTCCCCGTTGGATGACCCCAACGTCGGGAGTTTCATGGGTCACATGGCTATTGCCCTCGGCCAGCTATCAAATCTTGAAGGTTTTGTCATGCAGGCTGATAATTTGAGGCAGCAGACTATCCATCAGATGCACAGGATTCTGACAGTCAGGCAGGCAGCTCGATGTTTCTTGGCCATTGGAGAGTACCATAATCGCCTCCGTGCCCTGAGCTCACTTTGGGCTTCTCGCCCTCGAGAGTAA</cdnaseq>

Protein Sequence

<aaseq>MGEASGSSGHPRQNPHVLGYGFHGAMPNSLPSANLFEQQGGANYFGELEEALMQQVATLRRTQQTATTTSTLHHGDTTLRVPERVSTNFLAPDCKHSSKRINSTDFHCDRDPTHCDPNAALFTLCEQQGGANYFGELEEALMQQVATLRRTQQTATTTSTLHHGDTTPFSTTATAAATARPPPTLDIFPSWPMRSLHTPKEGSNVTADTTDSESSSKNNSNQNASSDQHVLVGDMAGQFDQIPQQEQHKKMATNSPTHSSKTGKALDPKTMRRLAQNREAARKSRLRKKAYIQQLESSKLKLAQMEQDIHRARSQGLLLGAPGGNTSSGATMFDVDYARWLEEDSRRMAELHGGLHAHLPDSDLRAIVDDTLTHYDHLFNLKGVAAKADVFHLITGMWATPAERCFLWMGGFRPSELLKTLTPQLDPLTEQQVVGICNLQQSSQQAEEALSQGLDQLHQSLAETVAGGSPLDDPNVGSFMGHMAIALGQLSNLEGFVMQADNLRQQTIHQMHRILTVRQAARCFLAIGEYHNRLRALSSLWASRPRE</aaseq>

Gene Sequence

<dnaseqindica>1..107#465..592#839..977#1196..1323#1762..1859#2015..2161#3287..3346#3510..3569#3647..3724#3825..3864#3968..4239#4482..4721#5514..5660#ATGGGAGAAGCTAGCGGTAGTTCAGGACATCCAAGGCAGAATCCTCATGTTCTTGGCTATGGCTTCCATGGAGCTATGCCCAACTCCTTGCCTTCTGCAAACTTGTTGTAAGAGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCATGAGTCTTCTTTTCTCTTTTTGTGATTCAATTTATGCAGGTGCACCAAGAAACATGATCTGCACCATGCACTTTCTTTGCAAGTTTTGCCTAGCTAACCATACATATTTACTGGCTAAATCAAATTTCTTTTACTTGTTTTGACGTATGCTTGTCAACTTGACTTCTTCTTTTTTTACTATATACTGTTCTTCATGCTTCGTAGTACGTACACAGAATCTTTCTGTAGACCAATTTGCACTGATTTTCCCCCGATAAGCTGTTGGTCTAATGCTAATACGGAGTGATTACCCCTATGCATCCCTGACAGCGAGCAGCAAGGAGGTGCTAACTATTTTGGAGAACTAGAAGAGGCTCTGATGCAACAGGTGGCCACACTCAGGAGGACTCAACAAACTGCAACCACCACCTCCACCCTTCATCATGGAGACACCACCCGTACGTACATCTCTCTCTCTCTCTCATGTGTGTGTGTGAGACCAGTTGAACAAGACCAAAAACACACAACCTTGTGAGGCACTTTCTGGAGAGGTTAGGGCATTGTAGTCAAAAGCAGCCATGGGAGAGCAGTAGAAGTGGTGGCAGTTGTCCTGCTTGTGCTGTGTGCAGTACTACCTTGGCATGGCCATGGCATGAGAGTGTGACTACCTTGTGACTCCTCTCCATCTCTCTAGTCTCTTGCAGTACGAGTACCAGAGAGAGTGTCTACCAACTTTCTGGCTCCTGACTGCAAGCACAGCTCAAAGAGAATAAATTCCACTGACTTTCACTGTGACAGGGACCCCACACATTGTGATCCCAATGCAGCACTTTTCACACTCTGGTGTATTGCAATGCATTTCTTGATCTCATTCTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTACTATATACGTTCTTCATGCTTCGTAGTACGTACACAAGAATCTTTCTGTAGACCAATTTTGCACAATTTTCCCCCAATAAGCTGTTGGTCTAATGCTAATACAAATTAATTACCCCTATGCATCCCTGACAGCGAGCAGCAAGGAGGTGCTAACTATTTTGGAGAACTAGAAGAGGCTCTGATGCAACAGGTGGCCACACTCAGGAGGACTCAACAAACTGCAACCACCACCTCCACCCTTCATCATGGAGACACCACCCGTACGTACATCTCTCTCTCTCTCTCATGTGTGTGTGTGAGACCAGTTGAACAAGACCAAAAACACACAACCTTGTGAGGCACTTTCTGGAGAGGTTAGGGCATTGTAGTCAAAAGCAGCCATGGGAGAGCAGTAGAAGTGGTGGCAGTTGTCCTGCTTGTGCTGTGTGCAGTACTACCTTGGCATGGCCATGGCATGAGAGTGTGACTACCTTGTGACTCCTCTCCATCTCTCTAGTCTCTTGCAGTACGAGTACCAGAGAGAGTGTCTACCAACTTTCTGGCTCCCTGACTGCAAGCACAGCTCAAAGAGAATAAATTCCACTGACTTTCACTGTGACAGGGACCCCACACCTTGTGATCCCAATGCAGCCTTTTCACCTCTGGTGTATTGCCATGCATTTCTTGATCTCCTTCTCCCCTATGATATCTTCTTGCAGCCTTCTCCACCACTGCTACTGCTGCGGCTACAGCTAGGCCTCCTCCTACACTGGACATCTTCCCATCCTGGCCTATGAGGTCTCTCCACACACCCAAGGTATGCTTTGCATCTACTGTCTACTGTACTGCCTATTGGTTGTATCAACGACATGTGGTTTTACACAAGTATTAGCTCTGGTAAATATTCATGCTGCATATAAAGTTTTTTACAGCTGTGGTCTGAGCCCTGGCTTTTGCTTTGGCATGTTGTAGGAGGGTTCAAATGTGACAGCAGACACAACAGACTCGGAGAGCAGCAGCAAGAACAACAGCAACCAAAATGCCTCATCAGACCAGCATGTGCTAGTAGGAGACATGGCAGGCCAGTTCGACCAAATTCCACAGCAGGAACAACACAAGGTATGCAATGCATTGCTGTGATCTCGTATCACTGTTGCTTGATGCATCGGTGGTCTGGTATTGTTTCTGTGCTTCCCGTTTCTGTGCTTTGATCTGTCTTGGTCATCCTTATCATGCAAGTGCAATGGTATTGTTCCCTAGCCTGGCGTCATGCATGTCCCTAGCTCCACAACTTCCAAGATGCTCATGTAGATACATGCTCCTATAGGTAGAACAACCATTGTTCAGGGGCATTTAAGATCTCGCTGCTCCCAAGATCGCCAATCCCAACACGTTAGGTGAATCATTTGGCCCTATAGAAAGTTCCAACTAATTTCCCTGATGCTTCTTCCATGGGACCAGTGTTTTCTACCATCAGACGCTACTAATATATTACTACTAGATAGAGAATATTAGTCAGTCATCTCTTTGCATTCTTAAGAAACAAAGAAGTCATCTTCAATTTCTATTGGGACGATGCAAATCTTTATTTGACTGCACTTATTATCAGGAGTATGGACAATCTCTTCAGCAAGAAACAGTCGTTCTAGTTGATCTTTTATTGTTGGAATGGATAAGTTTAGAGGGTTTGGATATGTTAGATTAGTGCATGCTTGTTCATGTGGTGGCTGCATTTCTGCCATTGGCCTGCTGCAATAAGTGACAAATGAGCTTTCTTACAATATTGTCTCTATAGCTTGCAAACCTTGTGCGCTAATAATAAAAATGAACTAATCGATAATACAAATGATACTTTGGGTCAGTGGTGCTTTAGTTGTTTTCTGGTCAATTGATGAATTGCCAATATATAGGATGAATAAATAATCGCATGGACTATTTAAATTCGCTCATAACCGAAAGAGAGCTCTACATATTAGGCCTCGACAGCAACATATAAAAAAAAAGCAGAACCAGTTTTGTCTGTTGTTAGAGTGGGTGGCTTCCACCAAATGTACACGACTGTTTTTATTATTGTGCTTGATGTAACGTGCTGTAGAAACCATACTATATTGCTTACACCATAAACGCATACACATAGCATTGCTCTACCATTTATCCCCTAGTTAGTGTGTAATTACACATTAATTTGTGCACAGGTGTAGTAAATTCCATATTCTGATTTGTTCATGTCCACTTGGCATGCAGAAGATGGCAACTAACAGTCCCACTCATAGCAGCAAGACTGGCAAGGCGCTTGATCCAAAGGTCTCTTATCTTCTTATTAGTTTGATGCTTAGAGTGTGCTGACGTGTGCTGTGTGCATGCATGCATGCCAAGCAGATGCACAGAGCCATGCAGTGCAAGCTAATGACCATTTCGAGGCAGTATTTGAGATCGAGAGTTTTTTTTTTTCTCTTGGTGTCATCAGACGATGAGAAGGCTCGCCCAGAACCGAGAAGCAGCACGGAAAAGCCGACTGCGAAAGAAGGTGAATGTTGTGACCGATACTCGGCACGCAGCAGTAAATTTTCCATGTTCTAACAGTTTTGTGTATGGATCATACAGGCTTACATCCAGCAGCTTGAAAGCAGCAAGCTGAAGCTTGCTCAGATGGAACAGGATATCCACAGAGCTCGTTCCCAGGTAACTTTCTTTCAACACATCCATAATTTTATAATCGACAAATTGACTATGTGTTTAGCTTAGTTATACAGCGTAATCTGATTTTTTGAGCTATGTTTAGGGCTTACTGCTTGGAGCTCCAGGTGGAAACACCAGCTCAGGTGAATATATTTGATATAAACTTATCTATGAACTTCAGCTGGGATCTGCAGACGGGACTATGGTTCACTGAAACTGAGCTGTATGACTGACATTTATTTCCAGGTGCCACAATGTTCGACGTCGACTACGCCCGGTGGCTGGAGGAAGACAGCCGGCGCATGGCTGAACTGCACGGAGGGCTGCACGCACATCTGCCGGACAGCGACCTCAGAGCCATCGTCGACGACACGCTAACCCACTACGACCACCTCTTCAACCTCAAGGGCGTGGCGGCCAAGGCCGACGTGTTCCACCTCATCACCGGGATGTGGGCGACCCCAGCTGAGCGGTGCTTCCTCTGGATGGGCGGATTCCGGCCCTCCGAGCTGCTCAAGGTATGGATGACCTTATCTCTGAACAAAACATCAGTCATCAGATTACAGCGTCTCTTGTATTTGCTGAATTGAGTCTATGGCTAATTTGATCAGAAACATGACACTCACTTCAGAGTTGAAAATGAAAAATTTTCTCCAACAAATTCTTCAGGAAGATGAAACCAAGCTAAAATCTGAGCTCATCTTTCAAGTATACATATACAATTCTCCAATCTCACTGCATATTTTTTATGTTGATGCAGACATTGACACCCCAGCTGGATCCCCTGACTGAGCAGCAAGTGGTTGGTATCTGCAATCTTCAACAGTCATCGCAGCAGGCAGAGGAAGCTCTCTCCCAGGGCTTGGATCAGCTGCATCAGTCATTAGCAGAAACCGTGGCTGGAGGGTCCCCGTTGGATGACCCCAACGTCGGGAGTTTCATGGGTCACATGGCTATTGCCCTCGGCCAGCTATCAAATCTTGAAGGTTTTGTCATGCAGGTAAAGATTTCCAGTTGTATCTGCTACTCTTCAATATTGATCATCTTGTCATTTTGTCAGATAAAGATAGGAGTTGCACTCTCTCTTTGTGTGACTCAACTTCATAAATGAGCTAGTAACTACGTAAAATTGTTGAGTGTAAAATGTTGCTGTGTTCAGTAGAATGTTTATCTGTCTAGCCACTGCCCAGCAGCCAAAGCTGTGTCCTAGTAAACCTTAACAGTGCTGCCAAAAAATGTATTAAAAATAATTAACTAGTCCATATGTAAGAGAATATATCATGTTATGGCTCCATCATGTAGAGATGTTACTGTATCTAACATTGTAGAAAGAAAAGACTTTCCAACTAAAACAAGTAGCAAAACAAATATGTACTGCCGGCAACTTTTAGTTAGATTCCAGGAATGGGTTTTACTGGAACACACATAAAACTAAGGCTGTGTTTAGTTCGTGTGCCAAATTTTTTTTAAGTATACGGACACATATTTAAAGTATTAAACATAGACTAATAACAAAACAAATTACAGATTCCGCCTGTAAACTGCGAGACGAATTTATTAAGCCTAATTAACCCGTCATTAGCAAATGTTTACTGTAGCATCACATTGTTAAATCATGGCGTAATTAGGCTCAAAAGATTCGTCTCGTAATTTACATGTAAACTGTGCAATTGGTTTTTTTTCGTCCACATTTAATGCTCTATGCATGTATCCAAACATTTGATGTGATGGAATTTTTGGAAGTTTGAAGGGAACTAAACACTGCCTAATGTGCACCACATTGGATTTCCAGGCTGATAATTTGAGGCAGCAGACTATCCATCAGATGCACAGGATTCTGACAGTCAGGCAGGCAGCTCGATGTTTCTTGGCCATTGGAGAGTACCATAATCGCCTCCGTGCCCTGAGCTCACTTTGGGCTTCTCGCCCTCGAGAGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA034480

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA034480&oldid=36456"