BGIOSGA034890

From RiceWiki
Revision as of 08:59, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA034890| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA034890, complete gene.| tag = OsI_352...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA034890

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA034890, complete gene.

LocusTag

OsI_35285

Ensembl Transcript ID

BGIOSGA034890-TA

Ensembl Protein ID

BGIOSGA034890-PA

Length

3914

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:3298455..3302368

Sequence Coding Region

3298455..3299076,3300957..3302368

Genome Context

<gbrowseImage1> name=IndicaChromosome11:3298455..3302368 source=RiceIndica11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome11:3298455..3302368 source=RiceIndica11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTGCACCTCATTATATGGAAATGAGACAGATCAACTCTCATTGCTTGAGTTCAAGAAGGCAATCAGTCTGGATCCACAGCAAGCGCTGATGTCCTGGAATGACAGCACTTACTTTTGCAGTTGGGAAGGTGTCCTGTGCAGGGTTAAAACTCCACATCGTGTCATTTCTCTGAACCTTACAAACCAAGGTTTAGTTGGGCAAATATCCCCTTCACTTGGAAACCTAGCATTCCTAAAATTTCTGTTCCTAGACACAAATTCATTCACCGGAGAGATCCCTCTGTCCCTTGGTCATTTGCATCACCTTCGAACCATTTACTTGAGCAATAACACATTAGAAGGAGCGATACCTGATTTTACAAATTGTTCCAGACTCAAGGTCCTATGTCTCAACGGCAATCACCTAGTTGGACAACTGAATAATAATTTTCCCCCTAAGCTTCAAGTGCTGACTCTTGCATATAATAATCTTACTGGAACTATCCCTTCTTCCTTTGCCAATATCACAGGACTTAGAAAACTTGATTTCACAGCTAACAATATCAAGGGAAACATCCCAAATGAGTTTTCAAACTTCCTCATGATGGAGATTCTTCTTTTGGGTGGAAATATGTTGACAGCGTCTCTTAGCAATCTACAATATCTTGAGCAACTTGATCTGTCATTCAACCATCTTAACGGTGAGGTCCCAGTAGAAGGAATATTCAAGAATGCAACAGCCTTCCAGATGGATGGAAATCAGGGACTTTGTGGTGGGCTACCAGAGTTGCACCTACCTGCGTGTCCTACCGTGTTATTGGTTACATCTAAGAACAAGAACTCGGTTATATTGAAATTAGTAATCCCACTAGCCTGCATGGTATCGCTTGCTTTGGCCCTATCAATTTATTTTATTGGGAGGGGAAAACAGAAGAAAAAATCCATATCATTCCCATCACTCTGTAGAAAGTTCCCCAAAGTTTCCTTCAATGATCTTTCAAATGCAACAGATAGATTCTCTACAGCCAATTTAATTGGAAGAGGAAGGTTTGGTTCTGTATACCAAGCAAAACTATTTCAAGACAACATTGTGGTTGCCGTGAAAGTTTTCAATCTAGAAACAAGTGGATCGCAGGAGAGCTTCATTGCAGAATGTAATGCTTTAAGAAACTTGAGACATCGCAATCTAGTTCCTATCTTCACACTATGCGGTAGTATTGATGCTGAAGGCACTGATTTCAAGGCTTTAGTGTATGAGTTGATGCCACGAGGGGACTTGCATAAATTACTATACTCAACCGGAGATGACGGTGATGCTTCAAATCTGAACCACATTACATTAGCTCAGAGGATAAGCATAATTGTGGATTTATCAAATGCATTGGAATATTTGCACCATAACAACCAAGGAACTATTATTCATTGTGACCTGAAGCCTAGCAATATCCTTCTAGATGACAATATGATTGCTCATGTCGGAGATTTTGGCCTTGTGAAGTTCAGGACCGATTCCTCCACATCTTTTGGTGATTCCAACTCAATTTTTTCCCTTGCAATAAAGGGAACCATTGGATATATCGCTCCAGGTAATTTGAAAATTTTATCTTGCTTTTGTATTACTACATATTTCTTTAACATACCTAGCTATATGAGCTATACTTTGGTCTTATATATGCATTTTACAGAATGCGCTGAGGGAGATCAAGTCTCAACTGCCTCTGATGTTTACAGCTTTGGAGTTGTTCTCTTGGAGTTGTTCATATGTAGGCGGCCAATAGACGCTATGTTTAAGGATGGACTGAGCATTGCAAAGTTTACAGAGATCAACTTCCCTGACAGAATACTTGAGATCATTGATCCCCAGCTACAACAAGAGTTGGACCTCTGCCTAGAAGCTCCAGTGGAAGTAAAGGAGAAAGGTATACACTGCATGCTCTCTGTGTTAAACATTGGAATTCATTGCACCAAGCCAATACCAAGTGAACGCATTAGCATGCGAGAGGCAGCCGCCAAGCTGCACATAATCAAAGATGCCTATCTCAAAGGGAACTGA</cdnaseq>

Protein Sequence

<aaseq>MCTSLYGNETDQLSLLEFKKAISLDPQQALMSWNDSTYFCSWEGVLCRVKTPHRVISLNLTNQGLVGQISPSLGNLAFLKFLFLDTNSFTGEIPLSLGHLHHLRTIYLSNNTLEGAIPDFTNCSRLKVLCLNGNHLVGQLNNNFPPKLQVLTLAYNNLTGTIPSSFANITGLRKLDFTANNIKGNIPNEFSNFLMMEILLLGGNMLTASLSNLQYLEQLDLSFNHLNGEVPVEGIFKNATAFQMDGNQGLCGGLPELHLPACPTVLLVTSKNKNSVILKLVIPLACMVSLALALSIYFIGRGKQKKKSISFPSLCRKFPKVSFNDLSNATDRFSTANLIGRGRFGSVYQAKLFQDNIVVAVKVFNLETSGSQESFIAECNALRNLRHRNLVPIFTLCGSIDAEGTDFKALVYELMPRGDLHKLLYSTGDDGDASNLNHITLAQRISIIVDLSNALEYLHHNNQGTIIHCDLKPSNILLDDNMIAHVGDFGLVKFRTDSSTSFGDSNSIFSLAIKGTIGYIAPGNLKILSCFCITTYFFNIPSYMSYTLVLYMHFTECAEGDQVSTASDVYSFGVVLLELFICRRPIDAMFKDGLSIAKFTEINFPDRILEIIDPQLQQELDLCLEAPVEVKEKGIHCMLSVLNIGIHCTKPIPSERISMREAAAKLHIIKDAYLKGN</aaseq>

Gene Sequence

<dnaseqindica>1..622#2503..3914#ATGTGCACCTCATTATATGGAAATGAGACAGATCAACTCTCATTGCTTGAGTTCAAGAAGGCAATCAGTCTGGATCCACAGCAAGCGCTGATGTCCTGGAATGACAGCACTTACTTTTGCAGTTGGGAAGGTGTCCTGTGCAGGGTTAAAACTCCACATCGTGTCATTTCTCTGAACCTTACAAACCAAGGTTTAGTTGGGCAAATATCCCCTTCACTTGGAAACCTAGCATTCCTAAAATTTCTGTTCCTAGACACAAATTCATTCACCGGAGAGATCCCTCTGTCCCTTGGTCATTTGCATCACCTTCGAACCATTTACTTGAGCAATAACACATTAGAAGGAGCGATACCTGATTTTACAAATTGTTCCAGACTCAAGGTCCTATGTCTCAACGGCAATCACCTAGTTGGACAACTGAATAATAATTTTCCCCCTAAGCTTCAAGTGCTGACTCTTGCATATAATAATCTTACTGGAACTATCCCTTCTTCCTTTGCCAATATCACAGGACTTAGAAAACTTGATTTCACAGCTAACAATATCAAGGGAAACATCCCAAATGAGTTTTCAAACTTCCTCATGATGGAGATTCTTCTTTTGGGTGGAAATATGTTGACAGGTAGGTTTCCACAAGCCATCTTGAATCTTTCTACTCTCACTAATCTTCACCTTAGTTTTAATCATCTAAGTGGGGAGCTACCATCCAATTTCCTTTACTCTCTACCCAATCTACAAGTACTTGCATTGGACTACAATTTTTTTCAAGGCCATATCCCCAGCTCATTGGGAAACGACTCCAACATACGTGTACTGGACATATCAAGTAACAATTTCACTGGAGTTGTACCAAGTTCCATTGGCAAACTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAAAAGCATATGTATGAAACTTGGGGCAAATGCTAGCAAACGAGGGCAAAAATAAAGATTTTCTGTTCTGTGTTCTTCTCCACATAAGCACAGTAAATTTGACCATAGAAATTGACACAATGCTGGCTATTGGGATCACTACTTTCAGTATTATTGATTTCTTGTGCTTAGATGAAACCAAAGCCATGATAGGACATGCTTGTAGGTGTAACTCAGGTGGCCCACCACAAAGGCCCTGATTTCCATCAATCCTGAAAGCTGTTGCATTCTTGAAAATTCCTTTCGTGGGAATCTCGCCCTTAAGATGGTTGAATGACAAATCTAGTTGCTCAAGAAATTGTAAATTGCCAATAGAACCTGGTATTGAACCAGTTAAATTATTGTTTCAGTCACAGTCTAGTCCGCTACACTTTTCTACTCAACATGTCTCTCTTTGGCCTAGCCCGCAATTGGAGCTATAAGCCCAGCTCGCACATACTGTTGTGTTCAAGCTCTAGAAAGTAGTCCCATGCAATCCCCCCATCAAATTCGGCCGAATCTTTCACAATTTTTTAAAATTGATTGAGGGCTTTTGATGCACTCGACCACTCTTTTTGTTTTTCCCAAAATTGAAGTGAATCAGTAACACTCGGGATAAAAACATCCAGGGAAGCTCCAGCTGCCGGCCATCATCGGCAACTGTTAAATAGGGGATTGAATTTGGTGAATTAAAGCAGTATTGAAAGGGAAAATCACGAGGAAAACAAAGATGGAGGAGTGAGGAATCGATTTTTACAATCAATTAAAGGAGTAAACGTACGGGGAGGTACATGATGTTGCGGTGGCTGAGGCGCGCTGCGCACGCGGATCAGACCGGAGGAGATCGAACAAAAACCGGGCAACGAAAAAAAAGTTCCACGTGAAAAAAAACTGCGAAAAAACTAGACGGCCATTGAAAAAAAAGGGCGACGAAATAAAAAAAAAACGAGCGGAGACGGACCAAACCGTAACTCACGGTATTATGAATATCTAAGAAGTAATTTAATCAAATCTAAAAGTAATTTACATATATGATAAAATTAATTTAAATATATAATAAAATTAATTATATATATGTTTTTTATCAGAACATGACCATGTAACATCTTGCTATAAAAAATTATTTACAACGAATATAATGTATAATCCGATTGTTGATCGGATAAGTTATTTGAAAGAAATTTTATTTGAAGCTTACCTATTAGGAATCTTTTATTTATACTGTTGCATGCTTGCACACTTTGACGTGAGAAAAAGATATATTGCTACATTTTACCATTTATTGGTATAATAGTTGGTTTTGATTAATTAGTGCACATGTACTCGGAGAAAACTACACGTCGGGCGCTCGATCCGGGGGTGGGGAAATCGGGCAGCATGCAAACTAATTTCAACTGTTTTTTCTCTTAAATTATTTATCCAATTATGATCCGATTACACCATTAAATTCGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAACATAAGTAACCTAAAAGTTCTCAACTTATCTCACAATAATTTAACTTGGTCAATACCAGCGTCTCTTAGCAATCTACAATATCTTGAGCAACTTGATCTGTCATTCAACCATCTTAACGGTGAGGTCCCAGTAGAAGGAATATTCAAGAATGCAACAGCCTTCCAGATGGATGGAAATCAGGGACTTTGTGGTGGGCTACCAGAGTTGCACCTACCTGCGTGTCCTACCGTGTTATTGGTTACATCTAAGAACAAGAACTCGGTTATATTGAAATTAGTAATCCCACTAGCCTGCATGGTATCGCTTGCTTTGGCCCTATCAATTTATTTTATTGGGAGGGGAAAACAGAAGAAAAAATCCATATCATTCCCATCACTCTGTAGAAAGTTCCCCAAAGTTTCCTTCAATGATCTTTCAAATGCAACAGATAGATTCTCTACAGCCAATTTAATTGGAAGAGGAAGGTTTGGTTCTGTATACCAAGCAAAACTATTTCAAGACAACATTGTGGTTGCCGTGAAAGTTTTCAATCTAGAAACAAGTGGATCGCAGGAGAGCTTCATTGCAGAATGTAATGCTTTAAGAAACTTGAGACATCGCAATCTAGTTCCTATCTTCACACTATGCGGTAGTATTGATGCTGAAGGCACTGATTTCAAGGCTTTAGTGTATGAGTTGATGCCACGAGGGGACTTGCATAAATTACTATACTCAACCGGAGATGACGGTGATGCTTCAAATCTGAACCACATTACATTAGCTCAGAGGATAAGCATAATTGTGGATTTATCAAATGCATTGGAATATTTGCACCATAACAACCAAGGAACTATTATTCATTGTGACCTGAAGCCTAGCAATATCCTTCTAGATGACAATATGATTGCTCATGTCGGAGATTTTGGCCTTGTGAAGTTCAGGACCGATTCCTCCACATCTTTTGGTGATTCCAACTCAATTTTTTCCCTTGCAATAAAGGGAACCATTGGATATATCGCTCCAGGTAATTTGAAAATTTTATCTTGCTTTTGTATTACTACATATTTCTTTAACATACCTAGCTATATGAGCTATACTTTGGTCTTATATATGCATTTTACAGAATGCGCTGAGGGAGATCAAGTCTCAACTGCCTCTGATGTTTACAGCTTTGGAGTTGTTCTCTTGGAGTTGTTCATATGTAGGCGGCCAATAGACGCTATGTTTAAGGATGGACTGAGCATTGCAAAGTTTACAGAGATCAACTTCCCTGACAGAATACTTGAGATCATTGATCCCCAGCTACAACAAGAGTTGGACCTCTGCCTAGAAGCTCCAGTGGAAGTAAAGGAGAAAGGTATACACTGCATGCTCTCTGTGTTAAACATTGGAATTCATTGCACCAAGCCAATACCAAGTGAACGCATTAGCATGCGAGAGGCAGCCGCCAAGCTGCACATAATCAAAGATGCCTATCTCAAAGGGAACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA034890