BGIOSGA034922

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Revision as of 08:59, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA034922| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA034922, complete gene.| tag = OsI_353...")
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Gene Name

BGIOSGA034922

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA034922, complete gene.

LocusTag

OsI_35346

Ensembl Transcript ID

BGIOSGA034922-TA

Ensembl Protein ID

BGIOSGA034922-PA

Length

7345

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:3833195..3840539

Sequence Coding Region

3833195..3833257,3833346..3833778,3834284..3834427,3834534..3834616,3834721..3834835
,3835319..3835410,3835568..3835622,3835699..3835844,3835898..3836011
,3836159..3836352,3836995..3837122,3838536..3838593,3839809..3839885
,3840223..3840272,3840345..3840539

Genome Context

<gbrowseImage1> name=IndicaChromosome11:3833195..3840539 source=RiceIndica11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome11:3833195..3840539 source=RiceIndica11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCGCGCCGCCTCCGCCGCCGCCGCTGCACCCCGCCATCATCATCGATGACGACGACGACGACTTCGACTGGGAGGCGGCCGTGCAGGAGATCGACAGGCGATGCGCCCTCGCGTCTTCTTCCGCCGCGTCGGAGTCGGCACCGCCGCCGGAGCCCTCGGCGGCGGCGGCGGCGGCGGCCGGCACGCGGCAGTTGACGCTCGACCGATTCGTCGACTCCTTCACCAGGAGGAGACAGATGGCGGCGATGGAGAGGGGGCCGCCTGTGCCTGCTTCGCCGCCCGCAGCGGCGCCGATCCTACCGAGTGGCGCCAGGGGCCCCCCTGTGCCTGGTTCGCCGCCCGCAGCGGCGCCGGTCCCGCCGAGTGGCGGCTGGGGGCGCCCCAGTGACCGCGCCGGTGAGGGGTGCTCGCGTAGAGCGGACGAGGATGTCGTGCCTAAGCCCTGCGCCGTTGCTCTGGACCACGAGGCAGCGCGAACTTGGATTTATCCAACTAATGTACAAGTCCGAGAGTACCAAAAAAAATTTGTAGAGAAGGCTTTATTTACCAATACACTAGTGGCTTTACCAACAGGGCTTGGCAAAACTTTTATTGCAGCAGTAGTGATGTATAACTACTTTAGATGGTTTCCTGAAGGGAAAATAGTATTTACTGCACCTACACGTCCTCTTGTTACTCAGCAAATTGAGGCATGCCATAATACAGTGGGAATACCACAGGAGTGGACAATTGACTTGAAGGGGAATCTAAGCCCTTCAAAGCGATCATGCTTTTGGAAGTCTAAAAGAGTGTTCTTTGTCACTCCACAAGTTCTACAGAATGATATACAATCTGGGATATGCATGGTGAATCAACTCGTTTGCTTGGTGATAGATGAAGCTCATCGAGCCTCGCGAAATTATGCTTACTGTGTTGTTGTCCGTGAGTTGGAGGCAGCTCGTGTGCCGTTAAGGATTTTAGCTCTGACTGCTACACCAGGATCAAAGCAACCAGCTATACAAAATGTTATCAACAATTTGCGCATTTCTGAGTTGGTTCACTGTGATGAAAGTGATCCTGAAGTCAGCCGTTATATTCAGAGGCGCACAGTTGAACCTTTAGAGGTGTGCATGGACAGTGATAAATTTATACCAGTTGGCGATGAGGCTGAACAAGTCAATGATAAGCTTTTGGATGTTATACGTCCACATCTTGTTAAATTGCGTTCTGCTAGGGTCATTGATCACAGGGATGCTTCAAATTGGAGTCCACACCAGTTGCGCATGTTAAAGGACAAATTTGATCAAGCACCCCCGCCAAATATTCCTTTAGCAGACAAAAAGGAAATTGGTATATCTTTTCAAGCCCTAACCTTACTTTATGGCATTATGAAAATGCTTTTGAGCTATGGTATCAAGGCAGCACATCAGTCAATCGAAGCCAAATATAAAGAAGGATCATGGAAGGTGCTTACAAGAAATAACACATTTTTGGAAGTAAAGAAAACTATGGAGAACTTCTTATCTCAAGGCATTCTCAGTCCAAAAGTTCGGACATTGGTAGAAGTGTTGCTAGATCACTTCCGCAAAAATCCAAAGGACTCAAGGGTCATTATCTTTGCACATTACCGAGAATGCGTCAAAGAAATATTGTGCTCCCTAAGAAATATTGATGGTGAACTTGTGAGGCCTGCTGCATTCATTGGTCAAAGTTCTACAGGTGATCAACTGAAGGGCCAGACACAGAAAATGCAACAAGCTATTTTGCATAAATTCCGGTCTGGGGAATACAATATTTTAGTGGCAACATCAATTGGTGAGGAAGGACTAGATATTATGGAGGTTGATCTTGTGGTTTGTTTTGATGCCAACATCTCCGCATTAAGGATGATTCAACGTATGGGAAGGACTGGAAGGAAGAACGAAGGGAGAGTTGATATCCTTTTTTTGGTTGGTGAAAATTGA</cdnaseq>

Protein Sequence

<aaseq>MAAPPPPPPLHPAIIIDDDDDDFDWEAAVQEIDRRCALASSSAASESAPPPEPSAAAAAAAGTRQLTLDRFVDSFTRRRQMAAMERGPPVPASPPAAAPILPSGARGPPVPGSPPAAAPVPPSGGWGRPSDRAGEGCSRRADEDVVPKPCAVALDHEAARTWIYPTNVQVREYQKKFVEKALFTNTLVALPTGLGKTFIAAVVMYNYFRWFPEGKIVFTAPTRPLVTQQIEACHNTVGIPQEWTIDLKGNLSPSKRSCFWKSKRVFFVTPQVLQNDIQSGICMVNQLVCLVIDEAHRASRNYAYCVVVRELEAARVPLRILALTATPGSKQPAIQNVINNLRISELVHCDESDPEVSRYIQRRTVEPLEVCMDSDKFIPVGDEAEQVNDKLLDVIRPHLVKLRSARVIDHRDASNWSPHQLRMLKDKFDQAPPPNIPLADKKEIGISFQALTLLYGIMKMLLSYGIKAAHQSIEAKYKEGSWKVLTRNNTFLEVKKTMENFLSQGILSPKVRTLVEVLLDHFRKNPKDSRVIIFAHYRECVKEILCSLRNIDGELVRPAAFIGQSSTGDQLKGQTQKMQQAILHKFRSGEYNILVATSIGEEGLDIMEVDLVVCFDANISALRMIQRMGRTGRKNEGRVDILFLVGEN</aaseq>

Gene Sequence

<dnaseqindica>1..63#152..584#1090..1233#1340..1422#1527..1641#2125..2216#2374..2428#2505..2650#2704..2817#2965..3158#3801..3928#5342..5399#6615..6691#7029..7078#7151..7345#ATGGCCGCGCCGCCTCCGCCGCCGCCGCTGCACCCCGCCATCATCATCGATGACGACGACGACGTAAGCGCCTCCTTCTCCTCTTCCGGTCACCCCCCCTCCGCTCGCGTTTTCACCTTTGCTCCGGGAAACCCTAACCTCCCCCCCGCAGGACTTCGACTGGGAGGCGGCCGTGCAGGAGATCGACAGGCGATGCGCCCTCGCGTCTTCTTCCGCCGCGTCGGAGTCGGCACCGCCGCCGGAGCCCTCGGCGGCGGCGGCGGCGGCGGCCGGCACGCGGCAGTTGACGCTCGACCGATTCGTCGACTCCTTCACCAGGAGGAGACAGATGGCGGCGATGGAGAGGGGGCCGCCTGTGCCTGCTTCGCCGCCCGCAGCGGCGCCGATCCTACCGAGTGGCGCCAGGGGCCCCCCTGTGCCTGGTTCGCCGCCCGCAGCGGCGCCGGTCCCGCCGAGTGGCGGCTGGGGGCGCCCCAGTGACCGCGCCGGTGAGGGGTGCTCGCGTAGAGCGGACGAGGATGTCGTGCCTAAGCCCTGCGCCGTTGCTCTGGACCACGAGGCAGCGCGAACTTGGATTTATCCAAGTGAGTGTTCTCCATTTCTACCTGCATTTCGTGAAGAATCACTCCGTCATCAGTAGTTTTCTAGAGCATTTTCATTGGCAATTGAAACAGTGTTCAAGATTGCAAGAATAACCTGGTTTAGACACAATTAATTAGTGCATGTTTCAGTATTGGTGTACTAAGTATTTTGATTGCTCATTTGGACCTCAGAATCTTTTTTTTTTGTATAGCCTTCTAACTCCCCAGGGAACTCTCCTGGACTCCCTGTCTCCACTCTCCAACATAGATGTGCAAACATTCTGTTCCTCAGTGATTAATAATGTAATGATTCCAATATAAGCGAAACAAAAAATAACTTCTGAAACACCACTCAAATGCTCATTTCTGTTCTTGTTGTAGTTCACTTCTGCTGTAATCATGTTTGCTTTGTAAATAGTTAGAGGTTACACATAATAACTTAGCTCTCTAACCAAGGTATCAATGTGTCAGCTGTGTAATTTAAGTGGCTTTTGTTCATGTGTTGCAGCTAATGTACAAGTCCGAGAGTACCAAAAAAAATTTGTAGAGAAGGCTTTATTTACCAATACACTAGTGGCTTTACCAACAGGGCTTGGCAAAACTTTTATTGCAGCAGTAGTGATGTATAACTACTTTAGATGGTTTCCTGAAGGTAATTTTTTGTACCATGCTGGAACTTTTTTCCTCTTCTGTTGTAAATTGGGAAAAACCCTTTCTGACAGTTGGTCTTCTTATCTTGTAAATCTGAAAAAATAAAGGGAAAATAGTATTTACTGCACCTACACGTCCTCTTGTTACTCAGCAAATTGAGGCATGCCATAATACAGTGGGAATACCACAGGTATTAATTTCTTTCTGTAGATGTTCATGCTTATCTGGTATCAGTTGAAGATCAAATTTTCTTCTCTACCAGTACCTGGAACTATTGCTTTTTACTTGTTGCAGGAGTGGACAATTGACTTGAAGGGGAATCTAAGCCCTTCAAAGCGATCATGCTTTTGGAAGTCTAAAAGAGTGTTCTTTGTCACTCCACAAGTTCTACAGAATGATATACAATCTGGTGATTATTTCTCTTGTTTGTCCAATTGTCCTATGCTTTTAATATTTTTATTGGATATTTTACAATTGTACTTTGTCTTTGAAAGTTCCATGTGTTGCTTTATGAGTAGTTTAGAATGGCAAGTGGCAACCAAGTATTGATTTATTTCTGGAAGAAACAGCATCACTTCTTTTCTCGCATAGTAAAAACACAGTTGCACTAGAGCTTCCATTGAAATGGAGTCAGCACAAAAGAAGGCAGAAATTTTGTGCATAACAGATGCATATAAAAGCCCACACATGACAAGAAGTCATGTCCAAACTTGTAGTTCATATCGCCCCTGCAAATCATGTCAGCTATATAATTTACTCCCATTTGACACTAGCTTCACCATTCTCTTCCACCTTTCATTAAGTATTATTACCTCAATTTTATGTTTGGACTGCCCGCTTCATAATGCTACCATTTCTCTTGAGTTGACATTGTTAATTTGGCTTTTGGCAGGGATATGCATGGTGAATCAACTCGTTTGCTTGGTGATAGATGAAGCTCATCGAGCCTCGCGAAATTATGCTTACTGTGTTGTTGTCCGTGAGGTATATTTGATACCCAAGCAATCTCTTTTGTTGGTTATCTTTCATGGGTTTCCTCCATATCAAGCTCATTTGAAGAAGATGATATCGGTAGGGTGTAAATGAATGAGTCGTTCTGACACCTGCTTGTTATTTTTCTACTTTTCTGCTTTGTTGACAGTTGGAGGCAGCTCGTGTGCCGTTAAGGATTTTAGCTCTGACTGCTACACCAGGATGTTAGTCTCCTCAAAATTAAATAGAAGTGCTGAAAAATGGAGATGCTTGCTAATTTTTCAATCCTGTTTTATTCAGCAAAGCAACCAGCTATACAAAATGTTATCAACAATTTGCGCATTTCTGAGTTGGTTCACTGTGATGAAAGTGATCCTGAAGTCAGCCGTTATATTCAGAGGCGCACAGTTGAACCTTTAGAGGTGTGCATGGACAGTGATAAATTTGTAAGTTGTCTATGCTGTTTCTCTCTTCTGAAGGGTCACTTGTTTCAATGCAGATACCAGTTGGCGATGAGGCTGAACAAGTCAATGATAAGCTTTTGGATGTTATACGTCCACATCTTGTTAAATTGCGTTCTGCTAGGGTCATTGATCACAGGGATGCTTCAAATGTATGTTTCATGCTGTCTTTAATACATCGATCATCTAGATGCATTCATTTTAGGTGAAGAATTTATCTACTTCTGTCCTGATGCTTTGCTGCTCAGGCACTTCTGATTTGCTACTCATGTGCATTATTAATTGCTTATTTTTTCCAGTGGAGTCCACACCAGTTGCGCATGTTAAAGGACAAATTTGATCAAGCACCCCCGCCAAATATTCCTTTAGCAGACAAAAAGGAAATTGGTATATCTTTTCAAGCCCTAACCTTACTTTATGGCATTATGAAAATGCTTTTGAGCTATGGTATCAAGGCAGCACATCAGTCAATCGAAGCCAAATATAAAGAAGGGTATTGCCTACACTCTACAAACACTTCTATTACAATGTTTCACTTGCATGTCATCATAGTGCATAATTAGGCTCCTAACTGTGGATCTTCTGAGCATCATCCCCTTGAGCATGAAAGAATATCCTTTACACTTTTACTGATTATACTTTTGCAAAGCAGTAGCAGCCCTAGTCCATTCTGTTTAGAACTTCGATATAATATACCAATATAGTGAGAATTCAGGAGCTTAGTCAGTTCGTTGTATTTGAGCTGTTCCATATACACTTCTGATGATAGTACTGTTTTTGGTAGGTTGAATGGTATATGTAAATAAGTACCTGAATGAAGCTTGTAGCCTTGTACATCTCAACAATATCATTCTTCCAGTTCCTGTTCCCATCCCATCTAGATTCTTTTATTTACCCTTGCTACCTTCTACTCACCAACTACTGCACCATCTGCTAGAGACAATCTCATCCTCCGGTGAGGCATCCCTACACTTGAGCAGTGAACACACCCACATCTCATATAAATTAATTGATCGATACACTAGACTAGAGATCTCACCCTTTTTTTTTTCTTGATTCTGTGCATGCTCTACCGAGTTTTACAAGAAAGTCTTCCATGCGTGCTCAAATTTATCATGGCTTTTGTGTAATGAAGATCATGGAAGGTGCTTACAAGAAATAACACATTTTTGGAAGTAAAGAAAACTATGGAGAACTTCTTATCTCAAGGCATTCTCAGTCCAAAAGTTCGGACATTGGTAGAAGTGTTGCTAGATCACTTCCGTAAGTAACTTTCTCGTAATGTGGTACATATTTCTTCTTTGTCTAGTTGATCAATAATTCTATAATGTATACTGCTTGCTATACAACAACCTACTCATTCTGTAGGACAACTAATAGCTCAATCTATCAGAATAAAGTTTAGTGCATCATTCCGTGGAGTTGTATTTTTGTAAGAATAGTAACTCTTTTGTAGTATAGAAGTGTTTTGTTGGTGAAACTTTTCTGTTTAGTACTCCCTCCATCCCAAATTATAGGGCGCCCTCTTTTTAAGGAAAATCAAACTTGGTAACTTTTGACTAATAACCATATTAACCATATATATGCTAAGTATTATGCATGTTATATCAATAGATTCATATTTTAAAGTACTTTCATGTGATGCTAATTTTATATTTGTTGGAAACATAACATGTAATATATTAATGGTCAAAGTATGTCATTGAAGACCGCGTAAAAGAAAGAAAAAATATAGGCCTTATAATTTGGGACGGAGGGAGTATTACAGTGACACCTGAATATTTTTCACTAGTATTCTTGCAAATGTGGCACTCTGTCAGTTCCAAAATACAAGAATTTCTTGGGGTTTTACTGAAGATTAATGTTGAGTAGAAAAGACTATGATGCCCTTTATTAAATGAGGTATCCTTGGGGAGTTGGGGGTGGAGGGTGGTTGGGGGTAATATGGGAATGAATGAGAGGTGGTTGATGGGACACACACTACTCTAGAAGTGCTTATATTCCAGTACAAATTCCAAATGCTAGAAGTGCTTACATTTTGAAATAGAGAGAATACTATTTTGTCTGCTTGAAGTCATTGAGTGTCTTTTTCTGGAAGATAGTTGGGGTGGACCTTACCAAGGGGTGAGGATTGTATTATTATAATATTTAATGATACTGAGGAGTGTATTTTGTAGCTAGGGCAGGAGGAAAGGCTTTAAGTCTTTGAGTCTGTTTCATTAAGGAGAGTCATGTCTGAAACTCTGAAAGCAGCATCCTCTTCCATCTGTATTTGTTTAATGGTACTATTGTCAAATAGCAGACAAATATTTCAACAACACAAGGTAGAGGTCTTTTTTGGTCATTTTTAATCTTGTATTTTGAATGGAGTGACAAGTGCCATGGGATGTCACGGAACACAACAGGTAGCACTCAAGTTGTGAGAGAAGAACGGATGGTCTTAGTTTTCTAACATCATTATTTCTCTATAGAGCACACTGATCGGATGTTACATGTTATTTTTTTTCATTCACATGATTGCATCACAAGATACACACACCCTATAGGAAGAAACTTTTATTGATTGACTTCAATATCATTCCGGAATTCATTTCCTTGCATGAACAAAACCGGGGCAAACATTGTGAAGTTTCAAGTTTATTTATGACAACTTTGATACTGGTTATGTTGACGCAGGCAAAAATCCAAAGGACTCAAGGGTCATTATCTTTGCACATTACCGAGAATGCGTCAAGTAAGAAACTATGCAGTAGTCTTTTTCTCTATTATATCAATTTGCAAATTCTTATTTTACACTGAAAATTTGATGCATGCATAATTTTTCTGTGCTGTTCTTTTTGGTTTTGTATTGTTATTAGTTTATTATCATTGTTATTGTTTGCGTGTGGGTAGCTTACTAGCTTATCCGATGATAAATATGTTGAAGGCAGAAGCCATTTGGCACCATGTGTTTCACAGGGGTTAATCTATTAGCAATTCTCTTAAACAACTTTTACTGAAGGTATCATGAGAATGGTATTGACGTGTTCTTAGTGAAATTGGACTGACAGGTCATTGGTCTTTCAGGGTTCAATGCAATGTATGTCATGTGGTTTAACTTGATCTATGGAACCACTGATTATCCTGTACCAATTTTAACAGAATGAGTACTAGATGAAATTGTCAAAGAGCAATATGTAGAGAATGCTAGTAGTATGCTAGTCAGATTACCATACATGTTCATTTTATTCATGCCAGCATTGACCAATACTCCAATAGTTACTTTCATAATGTTTATACATAAACGATACCACTCATGAATACACGATTCACATTTCCAGTGTGATATTCTAAACCCTTGTGCACAAGTATAAAATGATTTATAAATGGAATCAGAGGGAGTACTGAATTAATACATGGAAACCTACAATGTCAGGACAGAAGGAAGTTGTGTTTGATAACAGCAATAGCTCATATTAAACATGGACACCAAATGGATAGTTGGAGGCAAGTCAGCTTGGGAAAACTAAGCTTTACATCTTTTTGTCAACATCTTAAATCTTCTGATCCAATTTCTTTACTTTTCTTGACAACCAGCTATAATTTCTAAACGACGAATTAAGGCATACTAGTGCTGAACATGTCACTATGCACTGGATATGCATATTTACTTTCATTTGTAGGGGTTGGTTTTAAGTCAGTTAGTGGGTCTTGCATCTTTTAAACAGTTCCCTATCAACTATAGCTAGCATTCATGTCTTAGTTTCTCTGTGTTGTTTTTAAGACTCAGGATGCCCTATAATTTTGTTGAATTTTCTGTGCTATTGTGTATATCTCCTTGCTCCAGCAAACAATCTGTTTGTTATTTTAGCTGTGCATCAGAAACAATGTACATTCGTGCTTTGCTTAATTGTCTGTCAGAACCAATCTATTATATGGCTTGAATGTTTTGTTATACTGTGAAACACAGAGAAATATTGTGCTCCCTAAGAAATATTGATGGTGAACTTGTGAGGCCTGCTGCATTCATTGGTCAAAGTTCTACAGGTATGATAATGTGTTATCGGTGATCAGCTGAGATTTAATTGTAGATCACTGATTTCATAGAAGTATGATTTTGAAACATATGATCTATAGTTCTTTACTTTTTATTTCAATATGCTAAGTTCTTCAATTAGAATATGTGTTCTGGTCTGATTTTCATTCTCCAGGAGTTTGTAGCATTTTGGATGGTAATGACCATACGAAATAAACATAGTGGTCTCCTACATTTTCCTTTATCCAAGTAGTTTAGTGGTAGTAATATTCTATGAATGGAGCATTTATGCATTTAAACATATGAATCATATGATGTGTTTATTTATTTCAAGTTTTTTGCCTTTAGGTGATCAACTGAAGGGCCAGACACAGAAAATGCAACAAGCTATTTTGCATGTATTGAACTATATACTCTGCTCATCCATGATTTGCATTTTTTTCTTCTATCTGACTGTAAATTGTTTACAGAAATTCCGGTCTGGGGAATACAATATTTTAGTGGCAACATCAATTGGTGAGGAAGGACTAGATATTATGGAGGTTGATCTTGTGGTTTGTTTTGATGCCAACATCTCCGCATTAAGGATGATTCAACGTATGGGAAGGACTGGAAGGAAGAACGAAGGGAGAGTTGATATCCTTTTTTTGGTTGGTGAAAATTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA034922