BGIOSGA035016

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Revision as of 09:01, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA035016| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA035016, complete gene.| tag = OsI_355...")
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Gene Name

BGIOSGA035016

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA035016, complete gene.

LocusTag

OsI_35562

Ensembl Transcript ID

BGIOSGA035016-TA

Ensembl Protein ID

BGIOSGA035016-PA

Length

5849

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:5706858..5712706

Sequence Coding Region

5706858..5707175,5707731..5707892,5707999..5708810,5708897..5709105,5709901..5710074
,5710462..5710916,5711294..5711720,5712099..5712179,5712279..5712469
,5712563..5712706

Genome Context

<gbrowseImage1> name=IndicaChromosome11:5706858..5712706 source=RiceIndica11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome11:5706858..5712706 source=RiceIndica11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCACCGAAGGCCAAGAAGAAGCAGTCCGCGGCGTCGCCGCAGCCGTCCCCTCGCACCCCTGCATCCCGCGGCCGCGAAGGTGGAAGCGTCGCCGCGGGCGGCGGCGACGGAGGAGGAACTCTCGACCTCCCGTCCGTCGCCGCGGCGGCGGCGGCGCGGCACCCGGCGCTCGTGCCCCGTGGCGGCGAGGGGTGCTTCTCCGGGACCGTCGCGGAAGTGGCCCCCAGGGGCAGGAGCCGCGGCGGGGAGGCGAGGCTCTGGCTCTCCGAGCCCGCCATGGTCGGCGCCGCGCTGCGGCCTGGGTGCCTCGTCTCCGTATCTCTCATTTCTTCAAATAGGGGTCGATCAGATGGTTCACCACTTGATAGTTTATTTGAGGAGTGCAACGAGTTCTTTGATCTTGATGTGGATAATGATCTCATGCCTAATGAAGCTGGTCGAAACTTTGTGATTGCCAAAGTTTTCCCCTCACGTGAGGTCCAAAAGAATGGTATCAAGCTGTCTTGGGACCTTGCTTGCTCCCTGGGAAATCCTTCAGTAGGTTGTTCCTTGTTTTTTAGCACCCTATATACATCTCAGGCCCCAAAGGAAACTGATAGTGTTGACATTTTACGGGTGATAAAATGCAGCAATCTTTACCTTAGTTTTGTCCCAGCTAAAGTTGGATCTTCCAGCGAGATTGAATCTGAGTCTGTACACCATCCTATAAGAAATGGAATGGTTATAGAATCACCTAAGAGAAATTCTTCAGTTCTGTCAGGCAGGAATGAGTCCTATGATATTGCATCCCACAGTGGCCCTTCATTGTGTTTGGATCCAGCTACTGCAAGATCATCATTAGCAGATGAGAAAATTAATGAGTTGCTGCAGACTTGTGCATCACGCTGGCTCAGTGGTAGGCACCTACTGAAAGCAAACTATGTTCCCCTCCTAATGTGTGGGAAATTGTCTATGTTTATTGTTATGGGAGCAGAAGTAGATGGTTCTGCTCCTGATGTGGTGCATGATAAAGATAAGTTACCGTCTAATGAAGAGATTTCTGGTAAATTTGGGGAAGCGCCTGTTTCATTCCTTGTTGACAGAACCACGAAAGTGCATCTTTCTGGTCCAGTCTGCTCAGAGGAGATTGCCTTTGTTAAGCCAGGCCCATCAGCACACAATTCCTTTCGTACTGATGCAAGAAACGGAGATTTCAATCACGGTCCAAGACTTGGTGGGCTATCCAAAGAATCAAAAGAAATAAAAGAAATCATTTCATTTTCAATCAAAGACCAAATTGGCTTGCAAAGGGTCAAAGATAACCTCTGGTACAGAGGTATCCTTCTTTCTGGTCCACCTGGAACAGGGAAAACCTCTCTTGCTACTTCTTGTGCCTATGATGAAGGAGTCAATCTTTTTACAATCAACGGACCAGAGATCATTAGTCAGAATTATGGTGAAAGTGAGCAAGCACTTTATGATGTTTTCAGTTCAGCTAAGCAAGCTGCCCCTGGCTGTGAAAGGAAGGATGGGAGTGAGGAATTATCCATTAGAATTGTTGTCACTCTGTTAAAACTGATTGATGCTATGAGCCCTAGAGACCGTGTTCTCGTGATTGCTGCAACAAATCGACCCGATAGTATTGATCCGGCATTGAAACGCCCGGAAAGGTTGGACCGAAAAATTGAGATAGGAGTACCATCTCCAGTACAAAGGCTGGACATACTTCAACACCTTCTAGTTGGAGTTCAGCATTCTCTCAGTTGTGAGCAACTTGAGTCCCTTGCTTCCGCTACTCATGGTTTTGTGGGTGCTGATCTTGCTGCCCTCTGCAATGAGGCTGCGTTAAGTGCTCTTCGCCGTTATATCAGCCTAAAGAAGAGTTCTCAACAACTAGGGTATTATGACAATAATGCAGAAAAGCCTGATATTAGAGAGATTAATGATCCTTTGGGGTATCAAGTAAACTCAATAGCATCCTCTCTCTCAAAGTTAACAATGTCAGTGGATGATGTCCTGTGCACCACTAGGAGCAATGACACAGAAAACAATGGATCTAGTGGCAAGAAAGATGACTTGCTCTTGTTAGTGACCACTGAGGACTTTGAGAAGGCTAAAATTAAAGTGAGGCCGAGTGCAATGCGTGAGGTATCACTTGAACTTCCAAAGATACGATGGGAAGATGTTGGCGGCCAAGTGAGAATCAAGGAGCAGTTAATAGAAGCCATCGAGTTGCCACAGAAAAACCCGAAAGCATTCGAAAACATGGGGGTCAGCCCCCCTAGAGGATTGCTAATGATTGGACCACCTGGTTGCAGTAAGACATTGATGGCCCGGGCTGTAGCTTCCGAGGCAAAACTAAACTTCCTTGCAGTTAAGGGTCCTGAACTTTTCAGCAAATGGGTTGGGGACTCCGAGAAGGCAGTGAGATCACTATTTGCAAAAGCCAGAGATAATGCACCAGCAATATTATTTTTCGATGAAATAGATGGGCTTGCAGTAACTCGAGGCCGTGAAAATGATAGCGTATCAGTTGGTGATAGGGTTCTCAGTCAATTGCTAGTGGAAATGGATGGTTTGGAGCAAAGAATTGGTGTTACTGTTATTGCAGCCACAAATCGCCCTGACAAAATTGATTGTGCACTTCTGAGACCAGGTCGTTTCGATAGGCTGCTTGATGTGCAACCACCAGATGAGGCTGATCGTGTGGATATTTTCCGGATCCATACACGCAACATGCCATGTAGTCATGACGTCAATCTAAATGAGCTTGCTAGACTTACAGAAGGTTACACTGGCGCTGACATAAAGCTTGTCTGCAGGGAAGCTGCTATTGCTGCCTTAGATGAGAACATTGATATTCCAGAAGTAGAAATTAGACATTTCAAGTCTGCAATTAGCAGAATAAAGCCATCTGATGTTAAATTTTACCAAGAACTGGCGGCACAGTACAGCAGATTCGTTGATCCTATGTCGCAGAGTAAACAATGA</cdnaseq>

Protein Sequence

<aaseq>MPPKAKKKQSAASPQPSPRTPASRGREGGSVAAGGGDGGGTLDLPSVAAAAAARHPALVPRGGEGCFSGTVAEVAPRGRSRGGEARLWLSEPAMVGAALRPGCLVSVSLISSNRGRSDGSPLDSLFEECNEFFDLDVDNDLMPNEAGRNFVIAKVFPSREVQKNGIKLSWDLACSLGNPSVGCSLFFSTLYTSQAPKETDSVDILRVIKCSNLYLSFVPAKVGSSSEIESESVHHPIRNGMVIESPKRNSSVLSGRNESYDIASHSGPSLCLDPATARSSLADEKINELLQTCASRWLSGRHLLKANYVPLLMCGKLSMFIVMGAEVDGSAPDVVHDKDKLPSNEEISGKFGEAPVSFLVDRTTKVHLSGPVCSEEIAFVKPGPSAHNSFRTDARNGDFNHGPRLGGLSKESKEIKEIISFSIKDQIGLQRVKDNLWYRGILLSGPPGTGKTSLATSCAYDEGVNLFTINGPEIISQNYGESEQALYDVFSSAKQAAPGCERKDGSEELSIRIVVTLLKLIDAMSPRDRVLVIAATNRPDSIDPALKRPERLDRKIEIGVPSPVQRLDILQHLLVGVQHSLSCEQLESLASATHGFVGADLAALCNEAALSALRRYISLKKSSQQLGYYDNNAEKPDIREINDPLGYQVNSIASSLSKLTMSVDDVLCTTRSNDTENNGSSGKKDDLLLLVTTEDFEKAKIKVRPSAMREVSLELPKIRWEDVGGQVRIKEQLIEAIELPQKNPKAFENMGVSPPRGLLMIGPPGCSKTLMARAVASEAKLNFLAVKGPELFSKWVGDSEKAVRSLFAKARDNAPAILFFDEIDGLAVTRGRENDSVSVGDRVLSQLLVEMDGLEQRIGVTVIAATNRPDKIDCALLRPGRFDRLLDVQPPDEADRVDIFRIHTRNMPCSHDVNLNELARLTEGYTGADIKLVCREAAIAALDENIDIPEVEIRHFKSAISRIKPSDVKFYQELAAQYSRFVDPMSQSKQ</aaseq>

Gene Sequence

<dnaseqindica>1..318#874..1035#1142..1953#2040..2248#3044..3217#3605..4059#4437..4863#5242..5322#5422..5612#5706..5849#ATGCCACCGAAGGCCAAGAAGAAGCAGTCCGCGGCGTCGCCGCAGCCGTCCCCTCGCACCCCTGCATCCCGCGGCCGCGAAGGTGGAAGCGTCGCCGCGGGCGGCGGCGACGGAGGAGGAACTCTCGACCTCCCGTCCGTCGCCGCGGCGGCGGCGGCGCGGCACCCGGCGCTCGTGCCCCGTGGCGGCGAGGGGTGCTTCTCCGGGACCGTCGCGGAAGTGGCCCCCAGGGGCAGGAGCCGCGGCGGGGAGGCGAGGCTCTGGCTCTCCGAGCCCGCCATGGTCGGCGCCGCGCTGCGGCCTGGGTGCCTCGTCTCCGTAAGCTCATGCTTGATGCTCCTCCTCCTCCTTGAGATTTTTGGAATGCTTCGTGTGCCCAACTTGCTTTTTAAGCTAAGGAAGCTATGATTGTTCTGTAAATGTGATCCTTCTGTAGCTAAAGAAGCTGCGATTTTAGGAATGTGGCTCGATTTGGCATAGGTTAGTCGATGGTGAGCTGCTGAGCTTACCTTTGATTTGTGTGAGTCCATTTCACTGTTGCTTATTGCTGCAATGTTTGCTTTGATGCTGTATAGCTTGTCGCAGTTGAGAAGTTGAATTTATCTCTTGGTGCTGAAAATCATCGTTTTGTTTACTAGCTTCAGCAAATCTTTTTAATGAATCACTAGTGATCCCAGTTTGTTTCCCATCAGCTTGAGCATTGTCACTAAACAGCCATGTCCAGATATGTGTTATCGTGTCGAGTTATGTTACTCTCATCGTAGAACAAAACTTCCGTGTTTATACTTCATGCAATGATGCAAAAACCGTTTAGTATGCTAGTCTAAATGTCCTTTTTGGTACATAAGCTGAAACTGATCTCCTTATTTCTAGGTATCTCTCATTTCTTCAAATAGGGGTCGATCAGATGGTTCACCACTTGATAGTTTATTTGAGGAGTGCAACGAGTTCTTTGATCTTGATGTGGATAATGATCTCATGCCTAATGAAGCTGGTCGAAACTTTGTGATTGCCAAAGTTTTCCCCTCACGTGAGGTATGTGTGCCTTATACTTATAAAGCAATGGTTAGAATGCTTAATAACTGATAAAGTTTTTAATCTTGTCCCAGCGAAAAAGTTTTTAATCTTGTTGTTTTCTTAGGTCCAAAAGAATGGTATCAAGCTGTCTTGGGACCTTGCTTGCTCCCTGGGAAATCCTTCAGTAGGTTGTTCCTTGTTTTTTAGCACCCTATATACATCTCAGGCCCCAAAGGAAACTGATAGTGTTGACATTTTACGGGTGATAAAATGCAGCAATCTTTACCTTAGTTTTGTCCCAGCTAAAGTTGGATCTTCCAGCGAGATTGAATCTGAGTCTGTACACCATCCTATAAGAAATGGAATGGTTATAGAATCACCTAAGAGAAATTCTTCAGTTCTGTCAGGCAGGAATGAGTCCTATGATATTGCATCCCACAGTGGCCCTTCATTGTGTTTGGATCCAGCTACTGCAAGATCATCATTAGCAGATGAGAAAATTAATGAGTTGCTGCAGACTTGTGCATCACGCTGGCTCAGTGGTAGGCACCTACTGAAAGCAAACTATGTTCCCCTCCTAATGTGTGGGAAATTGTCTATGTTTATTGTTATGGGAGCAGAAGTAGATGGTTCTGCTCCTGATGTGGTGCATGATAAAGATAAGTTACCGTCTAATGAAGAGATTTCTGGTAAATTTGGGGAAGCGCCTGTTTCATTCCTTGTTGACAGAACCACGAAAGTGCATCTTTCTGGTCCAGTCTGCTCAGAGGAGATTGCCTTTGTTAAGCCAGGCCCATCAGCACACAATTCCTTTCGTACTGATGCAAGAAACGGAGATTTCAATCACGGTCCAAGACTTGGTGGGCTATCCAAAGAATCAAAAGAAATAAAAGAAATCATTTCATTTTCAATCAAAGACCAAATTGGCTTGCAAAGGTATACTGTGAAATATTGATTCATCGCTCACGTCTAACCATAAAAAAGAAAGTTATTTCCATCACTAATATGTTGACTGGTTTCAGGGTCAAAGATAACCTCTGGTACAGAGGTATCCTTCTTTCTGGTCCACCTGGAACAGGGAAAACCTCTCTTGCTACTTCTTGTGCCTATGATGAAGGAGTCAATCTTTTTACAATCAACGGACCAGAGATCATTAGTCAGAATTATGGTGAAAGTGAGCAAGCACTTTATGATGTTTTCAGTTCAGCTAAGCAAGCTGCCCCTGGCTGTGGTTAGACTCTCTAATGCTTTCCTACATTTTTTTCATCATGTCAACTATGCTTAAAATTAAGAAAATTTGCCTCTTTCATAGTTTTGGTTTTTCACTTATATGTTGTGAAACTGAAAAAATATAATAATTCTTTGTGGTAACTTTTGGAATCTATCTTTACAATGGTATCTCCTATACTCGGATAGTTAGCAAGGTATTGAATATAAAGCATCTTTACTACCTTCTGATAATTTGCTGAATACATTTAAATTGTTGAATTCTAGGTTCCTGAGTTGTAAGATGTTCTTTGCAGCTCATATGTTTTAAGTTACATTTTGTTCTCTTAAAAATTTATGCCGCCAAACTGGCCAGTTTACATTGATATATTGAAATCTATGTTTCATATTTCCTCTGTTTATAATGTAAAAACTCCAAGCCACCACATAAAGCCACATTGTCACCATTTTTTCACACTGTTCGATGGCTCTTTGATACTTTAGATCATCACCTATTTTTTCTAATACAAACAAATAATTTTCTTTATGTTGGATTCGGCACTTCTCGATGAGAATGATGACTTCCAGTCCAACATATTTTACAGTGCACCCATCAATGTCCACATCAATGTGCTAGGTATCATCTAGATATGATTATGGCAGTGGTTTACTAGACATATACTATGGATAACAAGTATTGAGTGCCCTGATTAGTTTTCTTCAAACTACATGTTACCATTGTAAAAGAATCAAGGATTGATTACCTATAATTTTTTTTTCTTTTAGATATTTATTGATGAATTGGATGCAATTGCTCCAGAAAGGAAGGATGGGAGTGAGGAATTATCCATTAGAATTGTTGTCACTCTGTTAAAACTGATTGATGCTATGAGCCCTAGAGACCGTGTTCTCGTGATTGCTGCAACAAATCGACCCGATAGTATTGATCCGGCATTGAAACGCCCGGAAAGGTTGGACCGAAAAATTGAGATAGGTACAAATATCTGATGCTATTCATGTACTCAAGTTAATGTTATGGGTGTAATCTACTTTACTTGCTTGTTGTCTGTTCAGTTATTGACACCAAGAACTATTTAAATTCTGAGATTTGTTGAGTACATGGATGGATCATTATATGTTGAATAATCATAACGTTTAAACCAAAAAAAATTTCTAAACAATGGATTATCTTTGAAGAAACATGGTATCATCCCTACCCTATAGATTATTTTATCATTTTCTCCACGTGCTTATAGGTGATATCAAATGTGATATGAGAACAATCAATTCTAATGGTGCAATAGCATGGTTGTCCAGTTGATAAATTGCTTACCTTAAGTCATCTGTTGATTTTTTTTCCCCTGAAATGGCTTGCTTGCAGGAGTACCATCTCCAGTACAAAGGCTGGACATACTTCAACACCTTCTAGTTGGAGTTCAGCATTCTCTCAGTTGTGAGCAACTTGAGTCCCTTGCTTCCGCTACTCATGGTTTTGTGGGTGCTGATCTTGCTGCCCTCTGCAATGAGGCTGCGTTAAGTGCTCTTCGCCGTTATATCAGCCTAAAGAAGAGTTCTCAACAACTAGGGTATTATGACAATAATGCAGAAAAGCCTGATATTAGAGAGATTAATGATCCTTTGGGGTATCAAGTAAACTCAATAGCATCCTCTCTCTCAAAGTTAACAATGTCAGTGGATGATGTCCTGTGCACCACTAGGAGCAATGACACAGAAAACAATGGATCTAGTGGCAAGAAAGATGACTTGCTCTTGTTAGTGACCACTGAGGACTTTGAGAAGGCTAAAATTAAAGTGAGGCCGAGTGCAATGCGTGAGGTATCATATTCACCCTCCCGATCTACCCAATTTAGTCTGATGACAATCTCTTCTATAATAATTTGCTATTTTTCCTTTCTCATAACAGTTTGCTGCTTAAGCAATGTTGTTGTTCTCTCTCATCTTTTCTTCTCTTTTTTTTTGTTTGTGTCAATCTTTTCATTCATGAACTCCAATTTAGTCTAGAAGTTGCATATTCGTTGAAAATTGATACAAAGCTTTGTCAAATAGTTCAGTTGATTGTATGTTCCTTTTGTGTTTCATTACTCAATGTGCTTCATAAATGCATTATTATCCTATGGGAAATAAAAAACTAGTGTTTTTTTTTTAATCTGTAGCTGATCGTCATATTTTGATATCTATGATTTCCTTTACAGGTATCACTTGAACTTCCAAAGATACGATGGGAAGATGTTGGCGGCCAAGTGAGAATCAAGGAGCAGTTAATAGAAGCCATCGAGTTGCCACAGAAAAACCCGAAAGCATTCGAAAACATGGGGGTCAGCCCCCCTAGAGGATTGCTAATGATTGGACCACCTGGTTGCAGTAAGACATTGATGGCCCGGGCTGTAGCTTCCGAGGCAAAACTAAACTTCCTTGCAGTTAAGGGTCCTGAACTTTTCAGCAAATGGGTTGGGGACTCCGAGAAGGCAGTGAGATCACTATTTGCAAAAGCCAGAGATAATGCACCAGCAATATTATTTTTCGATGAAATAGATGGGCTTGCAGTAACTCGAGGCCGTGAAAATGATAGCGTATCAGTTGGTGATAGGGTTCTCAGTCAATTGCTAGTGGAAATGGATGGTGAGTTTTAATACCTCATTGTGTTATCCATTATTTTAGTCCTGCAATTAGCTCAGCAGTTATTTTAATTGGATTATTTCGTTGTTAAGAGTACAATACAATTTGGTGTTTTAAGCTTGTGATTGTGGATTATGAATAATTTTAATTGGTAACTGTATTCATTTGAAGAATATCATGGTTGTTCCCTGCAAAAAAAAAAAAGGACTGCTTCTGAATGTGAACATTGGCTAACAATTGCATGCCAAAAATCCTCTCTTTGGCTATTCCTGTCGATGTCATTAGCTTCTCTTCGTATTCATGTTTTTGTCATGTACAACCTCTAAAAGATCCTATTGATGTTTTGGTTAGAGCATGCATAACTTATTATGGTTGCTACAGGTTTGGAGCAAAGAATTGGTGTTACTGTTATTGCAGCCACAAATCGCCCTGACAAAATTGATTGTGCACTTCTGAGACCAGGTTATTTGTCCGGTTATTCACATTTTGTCTGGCTTACATACATTGGTTGGGTTACTTATATAGTACTTGGTCTGACTTTATGAACAATGTATGCGCTAGGTCGTTTCGATAGGCTGCTTGATGTGCAACCACCAGATGAGGCTGATCGTGTGGATATTTTCCGGATCCATACACGCAACATGCCATGTAGTCATGACGTCAATCTAAATGAGCTTGCTAGACTTACAGAAGGTTACACTGGCGCTGACATAAAGCTTGTCTGCAGGGAAGCTGCTATTGCTGCCTTAGATGTAAGCTATTTGTTCTTTCCCTCATTGTTGCACATGACTATTGGATTGTATTTAGATGTTTGTGATTCACTGATAAACAATTATTTTCTCCAGGAGAACATTGATATTCCAGAAGTAGAAATTAGACATTTCAAGTCTGCAATTAGCAGAATAAAGCCATCTGATGTTAAATTTTACCAAGAACTGGCGGCACAGTACAGCAGATTCGTTGATCCTATGTCGCAGAGTAAACAATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA035016