BGIOSGA035139

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Revision as of 09:03, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA035139| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA035139, complete gene.| tag = OsJ_336...")
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Gene Name

BGIOSGA035139

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA035139, complete gene.

LocusTag

OsJ_33666

Ensembl Transcript ID

BGIOSGA035139-TA

Ensembl Protein ID

BGIOSGA035139-PA

Length

3751

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:9202621..9206371

Sequence Coding Region

9202621..9203368,9203664..9204005,9204201..9204670,9205088..9205480,9205865..9206371

Genome Context

<gbrowseImage1> name=IndicaChromosome11:9202621..9206371 source=RiceIndica11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome11:9202621..9206371 source=RiceIndica11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGGGACTTTAACGAGGCTTTATGGCAGTTTGAACATTTGTCGGTGCGACAGAGAGGTGAAGGGCAGATGCTAGCGTTCCGGGAACTAATCCAAAATTGTGACCTTCATGATCTTGGTTTTTCTGGTGTTCCTTTCACCTATGATAACCACCGTGAAGGGAGGAATAATGTAAGGGTCAGAGTTGATCGTGCTTTGGCTGATGACAGTTGGCGGGATATCTTCAGTGAGTCGCAAGTTGTCCACCTGACATCCCCATGTTCTGATCACTGCCCGGTTCAGCTAAAGTTCAGTTCGGAACCTCAGCGCAGCACCCGTTCAAAGTGCTTGCACTATGAGATATGCTGGGAAAGGGACGCTCAGTCCACTGCTGTGATCGAAGAGACTTGGAAGGAAGTGGGCGACAAGCAAGACCTAGGGAAAATTTCCTCTGCCCTAGGTCGGGTAATGGGTGCACTCCGGCTGTGGAGCAGAACAAAATTCAAAAACATAGGTCGAGAGTTGGAGAAGGCGCGTAAAATTCTAGCGCGTCTACAAGCTAGTAACTCTGATAGGACTGAGTTGCGCCGGGCCACTGACCACATGAACGAGCTCCTTTACAGGGAAGAAATGCTTTGGCTTCAATGCTCTAGAATCAGTTGGTTGAAGGAAGGTGATAGGAATACTAAGTTCTTCCACAGCAGATCAGTGTGGCGTGCAAAGAAGAACAGAATTTCTAAACTCCGGGATAGCTCCGGCACTATTCAAAGGGAGATGCCAGAAGGTACTAATGACATAGCCATTGAGCTAATTCCAAAAACTCAGCAGTCGATAGAGCTGAAAGAATTTCACCCCATTAGCCTATGTAACGTACTGTACAAGATTGTCTCAAAATGCCTTGTCAATAGACTTAGACCAGTCCTGGACGACCTGATATCGCCAAATCAGAGTGCCTTTGTGCCGGGGAGGTTAATTACAGACAATGCTTTACTTGCCTTTGAGTGTTTTCACTATATCCAAAAGAGCAAAAGACCAGATACGGCTGCTTGTGCATATAAGTTGGACCTCTCAAAAGCGTATGATCGAGTGGATTGGAGATTTTTGGAGAAAGAAAAAGTGATGGAAGGATCTCTGTCTCCGGTTCATGTTTGCCGCAGAGCTCCAGGGATTTCGCACCTCATGTTTGCTGATGATACTCTCCTGTTTTTTAAGGCAAATAATGACCAAGCCCGAGTGACTAAAAAGGCCCTCCATGATTATGCCCTAGGAACAGGACAACTTATCAACCCGGCTAAGTGTTCCATGTTGTTTAGCAGTGCTACTCCGGCCGAGGTACAAAATTCTATCAGCAACACCCTTCAGTTAACCAATGTGTCTTTTGAGAATAAATATCTGGGTTTTCCTACCCCCGAGGGGAGATTGAGCAAGGGTAAGTTTCAGAGCTTGCAAGAAAGAATCTGGAAACGTATAATGATGTGGGGTGAGAACTTTTTGTCAGCTGGAGGAAAGGAGATTATGCTGAAAGCAGTGATTCAGGCCATGTCGGTCTATGTAATGGGAGTTTTCAAGTTGCCAGATTCGGGCAGCTGCAGGTTGATCTGGGTTTCAGATTTGATTAAACCGGATGGCACCTGGGATTCTGACCGCATTAACCAAATCTTCTTACCCCTGGATGCTGATCTCATTCTGAATATCCGGCTGTCAGCTAGACAAGAAGAGGATTTCCTCTCGTGGCACCCTGATAGACTTGGTGTTTTCTCGGTCAGAAGTGCATATCACCTTGCTTTATCCCTCAATGAGATGGCTAGTAGCTCCAGCTCCTCAGATGAAAACCTGAGGAAAACTTGGGATTGTCTGTGGAAGTCCAAGGTTCCGCAGAAAGTGAAAATTCATGCATGGAAAGCAGCTTCCAATAGTCTGCCCACAATGGAGAATAAAAAGAAAAGGAATTTAGAGGCTTCTGAGATTTGCAAGATCCAACCCCCTGTTCCCTGGACCAAGCCGCAACTAGGGTGGATGAAACTGAACATTGATGGCTCCTTTGATGCTTCCCTGAATCAAGGGGGTATAGGTGCCATCCTGAGGAACAATGCAGGTTCAGTCATTTTCTCAGCTTGCGGCTTCATTGAGAGGTGCAGAAGTGCCCTGGAGGCAGAGCTCCTAGCGTGCAAAGAAGGCATTATCATGGCACTTCAATGGACTTTGCTTCCAATCTGCATTGAAACGGATTGCCTGGAAGCTGTAAACCTCAATCAGTCGGCAAATAATGTGAGATCAGAACTGGCTCACCTGATTCGGGAGATAGGTGAGTTGATCTCAGGAAACAGGGAAATAACTATTAAGAAAATGTTGCGATGCCAGGATACTGTTAGTCACTTCCTAGCTAATAGGGGTCGTACTGTGTCTCGATCTGAGTTTTGGCCAGACAACACTTATAACCTCATAACACACCTGGTGTGTGAGGATTCTTTGATTGATTAA</cdnaseq>

Protein Sequence

<aaseq>MGDFNEALWQFEHLSVRQRGEGQMLAFRELIQNCDLHDLGFSGVPFTYDNHREGRNNVRVRVDRALADDSWRDIFSESQVVHLTSPCSDHCPVQLKFSSEPQRSTRSKCLHYEICWERDAQSTAVIEETWKEVGDKQDLGKISSALGRVMGALRLWSRTKFKNIGRELEKARKILARLQASNSDRTELRRATDHMNELLYREEMLWLQCSRISWLKEGDRNTKFFHSRSVWRAKKNRISKLRDSSGTIQREMPEGTNDIAIELIPKTQQSIELKEFHPISLCNVLYKIVSKCLVNRLRPVLDDLISPNQSAFVPGRLITDNALLAFECFHYIQKSKRPDTAACAYKLDLSKAYDRVDWRFLEKEKVMEGSLSPVHVCRRAPGISHLMFADDTLLFFKANNDQARVTKKALHDYALGTGQLINPAKCSMLFSSATPAEVQNSISNTLQLTNVSFENKYLGFPTPEGRLSKGKFQSLQERIWKRIMMWGENFLSAGGKEIMLKAVIQAMSVYVMGVFKLPDSGSCRLIWVSDLIKPDGTWDSDRINQIFLPLDADLILNIRLSARQEEDFLSWHPDRLGVFSVRSAYHLALSLNEMASSSSSSDENLRKTWDCLWKSKVPQKVKIHAWKAASNSLPTMENKKKRNLEASEICKIQPPVPWTKPQLGWMKLNIDGSFDASLNQGGIGAILRNNAGSVIFSACGFIERCRSALEAELLACKEGIIMALQWTLLPICIETDCLEAVNLNQSANNVRSELAHLIREIGELISGNREITIKKMLRCQDTVSHFLANRGRTVSRSEFWPDNTYNLITHLVCEDSLID</aaseq>

Gene Sequence

<dnaseqindica>1..748#1044..1385#1581..2050#2468..2860#3245..3751#ATGGGGGACTTTAACGAGGCTTTATGGCAGTTTGAACATTTGTCGGTGCGACAGAGAGGTGAAGGGCAGATGCTAGCGTTCCGGGAACTAATCCAAAATTGTGACCTTCATGATCTTGGTTTTTCTGGTGTTCCTTTCACCTATGATAACCACCGTGAAGGGAGGAATAATGTAAGGGTCAGAGTTGATCGTGCTTTGGCTGATGACAGTTGGCGGGATATCTTCAGTGAGTCGCAAGTTGTCCACCTGACATCCCCATGTTCTGATCACTGCCCGGTTCAGCTAAAGTTCAGTTCGGAACCTCAGCGCAGCACCCGTTCAAAGTGCTTGCACTATGAGATATGCTGGGAAAGGGACGCTCAGTCCACTGCTGTGATCGAAGAGACTTGGAAGGAAGTGGGCGACAAGCAAGACCTAGGGAAAATTTCCTCTGCCCTAGGTCGGGTAATGGGTGCACTCCGGCTGTGGAGCAGAACAAAATTCAAAAACATAGGTCGAGAGTTGGAGAAGGCGCGTAAAATTCTAGCGCGTCTACAAGCTAGTAACTCTGATAGGACTGAGTTGCGCCGGGCCACTGACCACATGAACGAGCTCCTTTACAGGGAAGAAATGCTTTGGCTTCAATGCTCTAGAATCAGTTGGTTGAAGGAAGGTGATAGGAATACTAAGTTCTTCCACAGCAGATCAGTGTGGCGTGCAAAGAAGAACAGAATTTCTAAACTCCGGGATAGCTCCGGCACTATTCAAAGTACGACAACAGAGCTGTAGAATATGACGATCTCATATTTCAAAGAAGTGTTTAAGGCAGATCCTTCTGTTGATCATTCTAGGGTAACACGACTTTTTCAGGAGAGAGTAACAGAACAAATGAATGCAGAGCTGTGCAAAGAGTTCACTGATGAGGAAATTTGCGACGCTCTCTTCCAAATTGGGCCGCTAAAAGCCCCCGGGCCTGGATGGCTTTCCGGCACGCTTTTATCAGAGGAACTGGGGCACACTTAAAGCGGACGTCATAAGAGCTGTGAAGGAATTTTTCACCTCAGGGGAGATGCCAGAAGGTACTAATGACATAGCCATTGAGCTAATTCCAAAAACTCAGCAGTCGATAGAGCTGAAAGAATTTCACCCCATTAGCCTATGTAACGTACTGTACAAGATTGTCTCAAAATGCCTTGTCAATAGACTTAGACCAGTCCTGGACGACCTGATATCGCCAAATCAGAGTGCCTTTGTGCCGGGGAGGTTAATTACAGACAATGCTTTACTTGCCTTTGAGTGTTTTCACTATATCCAAAAGAGCAAAAGACCAGATACGGCTGCTTGTGCATATAAGTTGGACCTCTCAAAAGCGTATGATCGAGTGGATTGGAGATTTTTGGAGAAAGGTATGTACAAACTGGGTTTCGCTCATCGTTGGGTTAAGTGGATCATGGCGTGTGTAACCACGGTAAGATATACAATTAAATTTAATGGAACCTTGTTGAGTACATTTGCTCCATCAAGAGGCCTCCGCCAAGGAGACCCTCTATCTCCATTCCTTTTTCTGTTTGTGGCTGATGGTCTCTCCTGTTTGATGGAAGAAAAAGTGATGGAAGGATCTCTGTCTCCGGTTCATGTTTGCCGCAGAGCTCCAGGGATTTCGCACCTCATGTTTGCTGATGATACTCTCCTGTTTTTTAAGGCAAATAATGACCAAGCCCGAGTGACTAAAAAGGCCCTCCATGATTATGCCCTAGGAACAGGACAACTTATCAACCCGGCTAAGTGTTCCATGTTGTTTAGCAGTGCTACTCCGGCCGAGGTACAAAATTCTATCAGCAACACCCTTCAGTTAACCAATGTGTCTTTTGAGAATAAATATCTGGGTTTTCCTACCCCCGAGGGGAGATTGAGCAAGGGTAAGTTTCAGAGCTTGCAAGAAAGAATCTGGAAACGTATAATGATGTGGGGTGAGAACTTTTTGTCAGCTGGAGGAAAGGAGATTATGCTGAAAGCAGTGATTCAGGCCATGTCGGTCTATGTAATGGGAGTTTTCAAGTTGCCAGATTCGGTGTGTGATGATCTCAATCGGCTTTCGCGCAATTTTTGGTGGGGTGCAGAGAAGGATAGAAGGAAAACTCACTGGAAGGCCTAGGATTGCTTGACAAGATCGAAACAGAAAGGTGGGCTAGGATTCAGGGATTTCAGGGTTTTTAACCAAGCGCTACTGGCTAGGCAAGCCTGGCGCCTGTTGGATAACCCTGGGAGCTTATGTGCAAGAGTACTCAAGGCGAAGTACTACCCTAATGGATCTGTGGTTGATACGTGCTTCAGTGGCAATGCGTCTCTAGGCTGGCGAGCTATAGAGTATGGTCTAGAACTCTTGAAGAAGGGACCCATCTAGCAAGTGGGTAATGGTCGATCAATTCGCATTTGGCGCGATCCTTGGATTCCTAGAAACCATTCGCGCCGGCTAATCTCGACGAAGGGCAGCTGCAGGTTGATCTGGGTTTCAGATTTGATTAAACCGGATGGCACCTGGGATTCTGACCGCATTAACCAAATCTTCTTACCCCTGGATGCTGATCTCATTCTGAATATCCGGCTGTCAGCTAGACAAGAAGAGGATTTCCTCTCGTGGCACCCTGATAGACTTGGTGTTTTCTCGGTCAGAAGTGCATATCACCTTGCTTTATCCCTCAATGAGATGGCTAGTAGCTCCAGCTCCTCAGATGAAAACCTGAGGAAAACTTGGGATTGTCTGTGGAAGTCCAAGGTTCCGCAGAAAGTGAAAATTCATGCATGGAAAGCAGCTTCCAATAGTCTGCCCACAATGGAGAATAAAAAGAAAAGGAATTTAGAGGCTTCTGAGATTTGCAAGGTTTGTGGTACAGAAACGGAGGATGTTATTCATGCCTTATATCGGTGCCCTCAAGCACAACAACTATGGACTTAGATGAAAGATGTCATCTTTTTGGACCCTGCTGTTGTCAGACAGTGTACAGGACTAAATTTGGGTTCTTGACCTACTTATGCTTTTGCCGGAAGATAGACGAATATTTTCCTGATGACTCTGTGGCGTGTGTGGTTCGTGTGAAACGAAATAACTCACAGTAAAATACCTCCTCCAGCTGTGGTGTCCAAAAGATTTCTGCTGAGTTATGTTAACTCGCTGTATGATATCCATCAAAACCCGGTTGGGAAACTGTTAAAAGGGAAGCATGTGTTGGTTTATCCCCTGCGAAACACTTCTAAACCAGTGAAGATCCAACCCCCTGTTCCCTGGACCAAGCCGCAACTAGGGTGGATGAAACTGAACATTGATGGCTCCTTTGATGCTTCCCTGAATCAAGGGGGTATAGGTGCCATCCTGAGGAACAATGCAGGTTCAGTCATTTTCTCAGCTTGCGGCTTCATTGAGAGGTGCAGAAGTGCCCTGGAGGCAGAGCTCCTAGCGTGCAAAGAAGGCATTATCATGGCACTTCAATGGACTTTGCTTCCAATCTGCATTGAAACGGATTGCCTGGAAGCTGTAAACCTCAATCAGTCGGCAAATAATGTGAGATCAGAACTGGCTCACCTGATTCGGGAGATAGGTGAGTTGATCTCAGGAAACAGGGAAATAACTATTAAGAAAATGTTGCGATGCCAGGATACTGTTAGTCACTTCCTAGCTAATAGGGGTCGTACTGTGTCTCGATCTGAGTTTTGGCCAGACAACACTTATAACCTCATAACACACCTGGTGTGTGAGGATTCTTTGATTGATTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA035139