BGIOSGA035159

From RiceWiki
Revision as of 09:03, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA035159| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA035159, complete gene.| tag = OS11G02...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA035159

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA035159, complete gene.

LocusTag

OS11G0297800

Ensembl Transcript ID

BGIOSGA035159-TA

Ensembl Protein ID

BGIOSGA035159-PA

Length

5640

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:9710979..9716618

Sequence Coding Region

9710979..9711416,9713895..9714176,9714263..9714432,9714549..9714646,9715258..9716618

Genome Context

<gbrowseImage1> name=IndicaChromosome11:9710979..9716618 source=RiceIndica11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome11:9710979..9716618 source=RiceIndica11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCGGCGGCCTTCTCATGCTGCCATGGCGCCGGCGGCATGGTGGTGATCGTGGTGGTGGTGATGGCGATGTTGGGAGGGGTGGTCGCCGGCGGGGAGCCGCCGTTCTCGTGCGGCGGGGCGGCGGCGGGCGGCGGGCAGGGGTACGCGTTCTGCGACGCGACGCTGCCGGCGGAGCAGCGGGCGGCGGACCTGGTGGCGAGGCTGACGGCGGCGGAGAAGGTGGCGCAGCTCGGGGACCAGGCGGCGGGCGTGCCGCGGCTGGGCGTCCCGGCGTACAAGTGGTGGTCGGAGGCGCTCCACGGGCTGGCCACCTCCGGCAGAGGGCTCCACTTCGACGCCCCCGGCTCCGCCGCGCGCGCCGCCACCAGCTTCCCCCAGGTCCTCCTCACCGCCGCCGCCTTCGACGACGACCTCTGGTTCCGCATCGGCCAGGCCATCGGCACGGAGGCGAGGGCGCTGTACAACATTGGCCAGGCAGAGGGGCTGACCATGTGGTCCCCCAACGTGAACATCTTCAGGGACCCGCGGTGGGGCCGTGGCCAGGAGACCCCCGGCGAGGACCCCACCATGGCGAGCAAGTACGCCGTCGCCTTTGTCAAGGGGATGCAGGGGAACTCGTCGGCGATCCTCCAGACCTCCGCGTGCTGTAAGCACGTCACCGCGTATGACCTCGAGGACTGGAACGGTGTCCAACGCTACAATTTCAACGCAAAAGTGACGGCGCAGGATCTAGAGGACACATACAACCCGCCGTTCAGGAGCTGCGTGGTGGACGCCAAGGCTACGTGCATAATGTGCGCCTACACTGGCATCAATGGCGTCCCGGCCTGCGCGAACGCCGACCTCCTGACCAAGACCGTCAGGGGAGACTGGGGCCTGGACGGGTACATCGCCTCGGACTGCGACGCGGTCGCCATCATGCGTGATGCGCAGCGCTACACACAGACGCCGGAGGACGCCGTCGCCGTCGCCCTCAAGGCCGGATTGGACATGAACTGTGGCACCTACATGCAGCAGCACGCCACGGCGGCGATCCAGCAGGGGAAGCTGACGGAGGAGGACATCGACAAGGCGCTCAAGAACCTCTTCGCCATCCGGATGCGGCTCGGGCACTTCGACGGCGATCCCAGGAGCAACAGCGTGTACGGCGGGCTCGGGGCTGCCGACATCTGCACACCGGAGCACAGGAGCCTCGCGCTCGAGGCGGCGATGGACGGCATTGTCTTGCTCAAGAACGACGCCGGCATCCTCCCGCTCGACCGGACGGCGGTGGCCTCCGCGGCAGTCATTGGCCCCAATGCCAATGATGGCCTGGCCCTCATCGGCAACTATTTCGGCCCGCCGTGTGAATCGACGACGCCGCTCAACGGCATACTGGGGTACATCAAGAACGTGAGGTTCCTCGCTGGTTGCAATTCGGCGGCCTGCGACGTAGCCGCCACGGACCAAGCTGCTGCGGTAGCGAGCTCTTCGGATTATGTCTTCCTGTTCATGGGGCTCAGCCAGAAGCAGGAGAGCGAAGGGCGCGACAGGACAAGCCTGTTGCTCCCCGGGGAGCAGCAGAGCCTCATCACCGCCGTAGCCGACGCGGCGAAGCGCCCTGTGATCCTGGTGCTCCTCACCGGTGGCCCGGTGGACGTCACGTTCGCGCAGACGAACCCAAAGATCGGCGCCATCCTGTGGGCTGGTTACCCAGGGCAAGCTGGTGGTCTCGCCATCGCCAGGGTGCTCTTCGGTGACCACAACCCCGGTGGGAGGCTGCCAGTGACATGGTACCCAGAAGAGTTCACCAAGGTGCCCATGACGGACATGCGGATGCGTGCCGACCCAGCCACCGGCTACCCTGGCCGGAGCTATCGCTTCTACCAGGGCAAGACCGTCTACAAGTTCGGCTACGGTCTCAGCTACTCCAGCTACTCACGTCAGCTGGTCTCTGGTGGTAAGCCAGCAGAGTCCTACACCAACCTACTTGCTAGTCTGAGGACAACAACAACATCAGAAGGTGATGAGAGCTACCACATTGAAGAGATCGGCACTGACGGCTGTGAGCAGCTCAAGTTCCCGGCGGTTGTGGAGGTGCAGAACCATGGCCCCATGGATGGCAAGCACTCTGTGCTCATGTACCTCCGGTGGCCGAATGCTAAGGGCGGCCGCCCGACAACCCAGCTGATCGGTTTCAGGAGCCAGCATCTCAAGGTAGGGGAGAAGGCCAACATCAGGTTTGACATCAGCCCATGTGAGCACTTCAGCAGGGTAAGGAAAGACGGCAAGAAGGTGATCGACAGAGGGTCTCACTACCTCATGGTTGACAAGGATGAGTTAGAGATTAGATTCGAGGCCTGA</cdnaseq>

Protein Sequence

<aaseq>MAAAAFSCCHGAGGMVVIVVVVMAMLGGVVAGGEPPFSCGGAAAGGGQGYAFCDATLPAEQRAADLVARLTAAEKVAQLGDQAAGVPRLGVPAYKWWSEALHGLATSGRGLHFDAPGSAARAATSFPQVLLTAAAFDDDLWFRIGQAIGTEARALYNIGQAEGLTMWSPNVNIFRDPRWGRGQETPGEDPTMASKYAVAFVKGMQGNSSAILQTSACCKHVTAYDLEDWNGVQRYNFNAKVTAQDLEDTYNPPFRSCVVDAKATCIMCAYTGINGVPACANADLLTKTVRGDWGLDGYIASDCDAVAIMRDAQRYTQTPEDAVAVALKAGLDMNCGTYMQQHATAAIQQGKLTEEDIDKALKNLFAIRMRLGHFDGDPRSNSVYGGLGAADICTPEHRSLALEAAMDGIVLLKNDAGILPLDRTAVASAAVIGPNANDGLALIGNYFGPPCESTTPLNGILGYIKNVRFLAGCNSAACDVAATDQAAAVASSSDYVFLFMGLSQKQESEGRDRTSLLLPGEQQSLITAVADAAKRPVILVLLTGGPVDVTFAQTNPKIGAILWAGYPGQAGGLAIARVLFGDHNPGGRLPVTWYPEEFTKVPMTDMRMRADPATGYPGRSYRFYQGKTVYKFGYGLSYSSYSRQLVSGGKPAESYTNLLASLRTTTTSEGDESYHIEEIGTDGCEQLKFPAVVEVQNHGPMDGKHSVLMYLRWPNAKGGRPTTQLIGFRSQHLKVGEKANIRFDISPCEHFSRVRKDGKKVIDRGSHYLMVDKDELEIRFEA</aaseq>

Gene Sequence

<dnaseqindica>1..438#2917..3198#3285..3454#3571..3668#4280..5640#ATGGCGGCGGCGGCCTTCTCATGCTGCCATGGCGCCGGCGGCATGGTGGTGATCGTGGTGGTGGTGATGGCGATGTTGGGAGGGGTGGTCGCCGGCGGGGAGCCGCCGTTCTCGTGCGGCGGGGCGGCGGCGGGCGGCGGGCAGGGGTACGCGTTCTGCGACGCGACGCTGCCGGCGGAGCAGCGGGCGGCGGACCTGGTGGCGAGGCTGACGGCGGCGGAGAAGGTGGCGCAGCTCGGGGACCAGGCGGCGGGCGTGCCGCGGCTGGGCGTCCCGGCGTACAAGTGGTGGTCGGAGGCGCTCCACGGGCTGGCCACCTCCGGCAGAGGGCTCCACTTCGACGCCCCCGGCTCCGCCGCGCGCGCCGCCACCAGCTTCCCCCAGGTCCTCCTCACCGCCGCCGCCTTCGACGACGACCTCTGGTTCCGCATCGGCCAGGTACGTACGTTCGTATCCACAACTGTGCGCGCCTTTCCCGGCCCGCACCGGCGATCCGACGGCGCGGCGGCGCCGCCGCCGCGGCCATTATGGGTCGCCGGGCCCGTGGACGAAGGCGCGCGAGCGCGCCATGCACGACGCATGAGCATTTTGGGGGGGTTTTTTTTTTAGCTCGTTGCGGTCTCGGGGGGTTCTGTGATCCGTGACAAAAAGGGACAAAGTGGCGAGGGGTTATGTTAAGAATTACTCGTCGACGTGACTGTGGGATCTGGGATCGATCTGTCAACAGTAATTGTAAATTAGTGCAAATTAATTTATTAGCTACTCCCTCCTTGTTTAAATTTGATTTTGTTTATTCGAAATTTTAGAATTTAACAACCAATAGCTCTTAAAGTATGGCAGAATTTTTCTTTGCAAGTACTTCTACAATATTAGAGTTTTGTTACATATTATCGTTAGTCTAATAAAAAAAATAGTGATCAAAATTGCAAACCAATGATAAGTAAAATTAATAGTATCATCATATATATGAAATAGAGATACTAGCTAATAAATTCTATTGACATGTGCGCACAGCGTATCAATGGGTATAACCGCTTAAGACACGTGTTAGAAACAAATATGTGAGAAACACTCAGGGGTCTTCCGGTTAGCTCCACAAGTTGGTGGGCTAGCCGATCTAAGTTCGAAGTCTCATCCCTTTTAATTATTTGATATTAGGTTCTTCCTTAATATTCACGTCTTTTGTTAGGAACAAATCTGTCTAGTGAGCGCACCCACGTGTGTATAAAATTTGCCTAGCATTTGAATCCCTGGATTGGTTGAATTCATACACCTATGGCTCTATGGTCACACCAAAAGCATTTCTTCCTTAAATTTAATAAAATCGAGTCGTGGAACTTGGAAGTGTTGATTGTTCACACAACTTAATTTGTGGAAACTTGCAAGTCAACCTCTGCGACTATTAAGTTGATCAACGTAGCTAAGCTAGATGCCAATTGTGCTTGTTTTTTCTTCATAGAGGTTTGGTGGAAGTGCACTTAATTAGGTTTTGGACCAAAGACAAAATAAGGAATTTGTCCCGTTTAGAATGTATAGTCTTACCCAACATTGATAGGGTGTGTTCGGAGGTGGTGGTCGGGAACTTCGCCTCAGTATTAGCTAAAATAAACTTGAAAATGAATTAATATGATATTTTAAAATAACTTTCCTATAGGCTTTTATTTTGAAGTGGAAGCGGCAAAAGCTTTGCCGATTATATTAGGAGATCAGAAATTAATGCAGTCTAGCTGTTGCGCTTATACATATTGCGCTAATACAGAATTACATTGAAACCCTTTAGGCTAGAAAAGCCTCAACTAGGGATTAAAGGTAGAGAAGATAGCAATGATCCTATAGGCATATAAAAAATACACCGTGAGTTTGGCCTTATATACTTCTTTCTGTAGGGAGATTTTTCGCATATAAAACAGGGCTTTACCAAGTCCAAATACTACTAATTAATATATTATCACTACTATTATTCCATGTCCAAAATCCTTGGGACAAACTGCTGGGGTCAACTAGGAATTAAAGATGTAGCGGCCACACCACACGTGAATATGTGCGGTTCGTGCCAAAGACAAGCAGCAGAATGTTTCTGCGAGAAAAGAGGCGACTTTTTTCTCGTGTTAGGACGTCACATGTGACTGGTACATGCATCCGTATGAGTATGTAGATCGGACCTTTGCAACTGTACCTACCACCTAATCTTTTTGTTGAGTCCTCTCCGTGGGTATGGAGTGACCACATGCTATGAATCTTTAAATTCTTTCCTAAGAGCTGGCAATGGCTTATTTATGGCTTTATTAATAAGTAAGCATTAATAAGTTTTTTTAAAAAAAAGTAAGCATTAACCAATGTGTCAACACATGGCGTAGAAAAACTATATATTAGGGTGGGCATTTGTCATCTTCCTTACAAATCGATCTAATCAGTTGAGATACGGTTGATAAGCAATGTCATGTAAATGGAGCAACTAAAAATAACTTATGGGTGAAACTTTGAAGAGAAATATTTATTAGCATTCGTACAATTGAAACTATGTCAGACAAAATGAACATATGCTCTTTTCCGATTTGGCCATTAAAGCCATCCCAGCACTTACACAACCAGTACCCTTGGGCCTCACGTTCTTGCCGCATTGGCACCTTAAATATTTCAGAAAGTTTCATTTCACCTCCATAGCTTCATCGATCAGGTGTAGGCAAAAAGCGAACAGGGAGTGCTTCATTATTAGCTTCACTAATACTTTCGGTATTCTCTTTGCAAAAAGGGTCTCACCATGTGGTCACCAATCGTGTGTTGCAAGCATGCGTGCATATACCAGCTCATATCACTCACTCTGGATTATTGCATTTGCGTGCCACGTGAAATGCACACATTTGGCCGAAATATAATCATCACGAAAAGGCACATTGTGTGTACACCATCATGTAGGCCATCGGCACGGAGGCGAGGGCGCTGTACAACATTGGCCAGGCAGAGGGGCTGACCATGTGGTCCCCCAACGTGAACATCTTCAGGGACCCGCGGTGGGGCCGTGGCCAGGAGACCCCCGGCGAGGACCCCACCATGGCGAGCAAGTACGCCGTCGCCTTTGTCAAGGGGATGCAGGGGAACTCGTCGGCGATCCTCCAGACCTCCGCGTGCTGTAAGCACGTCACCGCGTATGACCTCGAGGACTGGAACGGTGTCCAACGCTACAATTTCAACGCAAAAGTGAGTCCCGTCACACTACTATATATAGACAGACGGGTCATCAGTGACGGTTCGAAACCGTGCATTATTGGTATTGTTTTTTTTAGGTGACGGCGCAGGATCTAGAGGACACATACAACCCGCCGTTCAGGAGCTGCGTGGTGGACGCCAAGGCTACGTGCATAATGTGCGCCTACACTGGCATCAATGGCGTCCCGGCCTGCGCGAACGCCGACCTCCTGACCAAGACCGTCAGGGGAGACTGGGGCCTGGACGGGTACGTGAGTCAAGTCATGTCTTCGTTGTTGTTTGATTCCGTGATGAATTTAGTCATGTCATCACGAGTGCTGATGCGTCTTGGGTTTTGGTTTTGGGGCTGGTTGCTTGCTGCAGGTACATCGCCTCGGACTGCGACGCGGTCGCCATCATGCGTGATGCGCAGCGCTACACACAGACGCCGGAGGACGCCGTCGCCGTCGCCCTCAAGGCCGGTACGTGCTGGCTCGTGATGACGATGGTCAATTCGTCACTTTCTCCAATAGCATTTACCTAAAGAAGGAAACTGTTTTAATCCCTCGAGGGGATATATATCCCCTCGTTCTTTCCATGTCACTTAAATGGTTATAAAACAATTTGAAAAAAATTAGAAAGGTGTGTTAACATGTGATATAACACTCCACAAACATGCAAGTTCAAATTCAACTTCTACATCTCGTAACGAAAAAAACAAATTGAACCGCAGCTAGTTAACGTATTATTCAGAGTCAAATTTGTTTTTTTCGTTGCGAGATTATAGAAGTTGAATTTTTACTTGCATGTTTGTGGAGTGATATATCACATATTAATACATCTTCTTAAATTTTTTCAAATTTTTTCATAACCATTTGAGTGACATGCAAATAACGAGGGGATATCCCCTCGAGGGATCAAAATCCTCTTCCCCTAAAGAAGACAAGCTTAAGTATTATAAAGTGAAAGCTGGACTGATTCATTTAACCAACGGCAATTGGACAGAGAGACAATTCGGTTCATCAGAAGCTTAATTGTTCCAAAAATAACTTGGACAGATTTGGATTAATTTTAAGTGATTTGGGAATTTCAGGATTGGACATGAACTGTGGCACCTACATGCAGCAGCACGCCACGGCGGCGATCCAGCAGGGGAAGCTGACGGAGGAGGACATCGACAAGGCGCTCAAGAACCTCTTCGCCATCCGGATGCGGCTCGGGCACTTCGACGGCGATCCCAGGAGCAACAGCGTGTACGGCGGGCTCGGGGCTGCCGACATCTGCACACCGGAGCACAGGAGCCTCGCGCTCGAGGCGGCGATGGACGGCATTGTCTTGCTCAAGAACGACGCCGGCATCCTCCCGCTCGACCGGACGGCGGTGGCCTCCGCGGCAGTCATTGGCCCCAATGCCAATGATGGCCTGGCCCTCATCGGCAACTATTTCGGCCCGCCGTGTGAATCGACGACGCCGCTCAACGGCATACTGGGGTACATCAAGAACGTGAGGTTCCTCGCTGGTTGCAATTCGGCGGCCTGCGACGTAGCCGCCACGGACCAAGCTGCTGCGGTAGCGAGCTCTTCGGATTATGTCTTCCTGTTCATGGGGCTCAGCCAGAAGCAGGAGAGCGAAGGGCGCGACAGGACAAGCCTGTTGCTCCCCGGGGAGCAGCAGAGCCTCATCACCGCCGTAGCCGACGCGGCGAAGCGCCCTGTGATCCTGGTGCTCCTCACCGGTGGCCCGGTGGACGTCACGTTCGCGCAGACGAACCCAAAGATCGGCGCCATCCTGTGGGCTGGTTACCCAGGGCAAGCTGGTGGTCTCGCCATCGCCAGGGTGCTCTTCGGTGACCACAACCCCGGTGGGAGGCTGCCAGTGACATGGTACCCAGAAGAGTTCACCAAGGTGCCCATGACGGACATGCGGATGCGTGCCGACCCAGCCACCGGCTACCCTGGCCGGAGCTATCGCTTCTACCAGGGCAAGACCGTCTACAAGTTCGGCTACGGTCTCAGCTACTCCAGCTACTCACGTCAGCTGGTCTCTGGTGGTAAGCCAGCAGAGTCCTACACCAACCTACTTGCTAGTCTGAGGACAACAACAACATCAGAAGGTGATGAGAGCTACCACATTGAAGAGATCGGCACTGACGGCTGTGAGCAGCTCAAGTTCCCGGCGGTTGTGGAGGTGCAGAACCATGGCCCCATGGATGGCAAGCACTCTGTGCTCATGTACCTCCGGTGGCCGAATGCTAAGGGCGGCCGCCCGACAACCCAGCTGATCGGTTTCAGGAGCCAGCATCTCAAGGTAGGGGAGAAGGCCAACATCAGGTTTGACATCAGCCCATGTGAGCACTTCAGCAGGGTAAGGAAAGACGGCAAGAAGGTGATCGACAGAGGGTCTCACTACCTCATGGTTGACAAGGATGAGTTAGAGATTAGATTCGAGGCCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA035159