BGIOSGA035274

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Revision as of 09:05, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA035274| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA035274, complete gene.| tag = OS11G04...")
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Gene Name

BGIOSGA035274

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA035274, complete gene.

LocusTag

OS11G0488500

Ensembl Transcript ID

BGIOSGA035274-TA

Ensembl Protein ID

BGIOSGA035274-PA

Length

6395

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:13707157..13713551

Sequence Coding Region

13707157..13707503,13707659..13708180,13708244..13708337,13709334..13709536,13710492..13710710
,13710809..13710978,13711607..13711956,13712803..13712941,13713039..13713105
,13713187..13713308,13713412..13713551

Genome Context

<gbrowseImage1> name=IndicaChromosome11:13707157..13713551 source=RiceIndica11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome11:13707157..13713551 source=RiceIndica11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCAGATGAGCAGCGGCGGCGTCGGCGTCGGCGGCGGCGGAGGGAGCAAGGTGATGTCGCCGAAGCAGGTGCTCACCGTCGTCCTCGTCGTGTTCTGCGCGCTCTCCTTCGTCAAGCTGCTGCTCCTCACCGGCTCCTCGTCGCCCGCCGCCGCCGCGCGCCGCGGCCGCGCCTCGGCGTGGGGGAACGGGACGGACGTGGGGGACGGCGGCCTCGCGCCCAAGGAGGCCGCACTGCTCCGGTCCGTGGTCGCCGCGCGCGCGCCGTGCCGGCTGCTCGTGTTCGGCCTCTCCCCGCAGCTCGCCGCGCTCGCCGCGGTCAACGCCGGGGAGGGCGCCGACAACGGCGCCGAGGACGCCGACAGCGCGCGCCGCTCGCTCCGCGGCGGCTCGGCGGCGTCGGCGGCGTCGGCGGCCAAGATCCACCAGGTGAGGTACCGCGACGCGGCTGGGGAGGCGTGGCCGCTGCTGCGGCGCGCGCGGGACAGCCCGGCGTGCCGGCGTCCGACGGGGGCGGTGCGCAGGTCCGGCTGCCACCTGGCGCTGATCACCACGCTGCCGCGGGAGGTGCTCGACGCGAGGTGGGACGTGCTCGTCGTGGACGGGCCGAGCGGCGCCGCCGCCGGGGAGCCCGGCCGGATGGGCGCCATCTACACGGCGGCGGCGCTGGCGCGCGCCTCGGCGGCGGGAGGCCGGGAGGCGGTGGACGTCGCCGTGCACGATGTGCACCGCACGGTGGAGCGGTGGTACGCCTGGGAGTACCTCTGCGAGGACAACCTCGCCGCCGCCAAGGGCCGCCTCTGGCACTTCCGCGTCGCCGGCGGCGGCCCGCCGGACGCGTTCTGCTCGACCGGCCCCGCCCAGATCTTCACACAGATCCCCCTTCCATCGGCATCGCCGGAGACAGGAGCCGTTCTTGAAGACGGCGACGGCGACCGCGCAGTTGGTTTGTTCATAGCTAGTGGCGCTAAGAGGTTGATTCTAATCAATGAGAAGAGACAGACCCGACAACTTGATTTGGTGAGTGCACCCAACTTTCTTGAGGACAAAAATCTTGAAAGCTTATCGGCGCAGATTATAATCAACTTACTTGCTACTGAAAACCTTGAAAGTTTGGAGAACTGCCATATAGGTGATAGTTGGCTGGAGGACCAAAAGGGTGGAAGGAAATTCCCAGGTCAAAACCCTGACCACGCTTGTTGGGCCCACCGGTCAGCCACTAGGCCACCGCCCACAGACAGACCCGTCAGAAAACCTCTCCCTCCGGCGATGTACGGCGACACCGAGCCGGCCGCCGCCGCCGCCGCGGAGCGCACGGCGTTCCGGCGAGCCGAGAAGCAGTACAAGCTCTACAAGCCGCTGAAGCCCAAGGGCGGGAGGGCAAGGAGCAAGCCGGGAGGCGGCGGCGGCGGCGGAGGATTGGAGGACCTGTCCGCGGTGGTCGACTTCCACGCGCTGCTCGCTGCCGCCGCCGGCGGCGGGGGGGAGCTGCCCGCCGGGATCGGGAGGCGCGACGTCGCCGGGTTCGACCTCTTCTGCTTCTTGGACCGACCTGGATTCTATTTCATACCTGGTGCTCTATCTATTGAGGAACAATGCTATTGGATCAGGGAAAGCTTGAAAACCTTCCCACAGCCTCCTAATAGAACTAACCTGACAGCTTTGTATGGTCCAATTTTTGACTTACTCACTGCTGCCAAAAGTGGAAAGATTTTAGTCGAAGTGGGAAATCCCAATGACCAAGAAAGATCCGAGCAGAACAGTGATGGAAGAAAATCCAATAGCTTCAAATTTCTTGAAGACACAGAGATACACAAGGGGGAGGTATGCAGGTCAACTGCAGCAACTACCCTTGTTCGGAAACTCCGATGGAGTACCCTTGGTCTGCAATTTGATTGGTCAAAACGCAACTATGATGTATCACTTCCACATAACAAGATTCCAGACCTCCTATCTGCTCTTGCAAAAAAGATGGCCATTCCAGCCATGCCATCTGGAGAGGAATTCAAGCCAGAGGCCGCCATAGTGAACTATTATGGCCCAAGTGACATGCTTGGTGGCCACGTTGATGACATGGAAGCAGATTGGAGTAAACCTATTGTAAGCATAAGTTTGGGGTGCAAGTGCATTTTTCTTCTTGGAGGCAAAACGAGAGATGAAGTTCCAACAGCAATGTTTCTGCGAAGTGGTGATATCGTATTGATGGCTGGGGAGGCACGGGAATGCTTCCATGGTGTTCCACGAATCTTCACAGGAAGTGATCAGGCAGAAATCTCTGCGCTGGTTCCGCAGCTATCTGCTGAAGATGACTCTTTTATCTTAAACTACATTCAAAATTCAAGGATAAATATCAACATCAGACAAGTCTACTGA</cdnaseq>

Protein Sequence

<aaseq>MQMSSGGVGVGGGGGSKVMSPKQVLTVVLVVFCALSFVKLLLLTGSSSPAAAARRGRASAWGNGTDVGDGGLAPKEAALLRSVVAARAPCRLLVFGLSPQLAALAAVNAGEGADNGAEDADSARRSLRGGSAASAASAAKIHQVRYRDAAGEAWPLLRRARDSPACRRPTGAVRRSGCHLALITTLPREVLDARWDVLVVDGPSGAAAGEPGRMGAIYTAAALARASAAGGREAVDVAVHDVHRTVERWYAWEYLCEDNLAAAKGRLWHFRVAGGGPPDAFCSTGPAQIFTQIPLPSASPETGAVLEDGDGDRAVGLFIASGAKRLILINEKRQTRQLDLVSAPNFLEDKNLESLSAQIIINLLATENLESLENCHIGDSWLEDQKGGRKFPGQNPDHACWAHRSATRPPPTDRPVRKPLPPAMYGDTEPAAAAAAERTAFRRAEKQYKLYKPLKPKGGRARSKPGGGGGGGGLEDLSAVVDFHALLAAAAGGGGELPAGIGRRDVAGFDLFCFLDRPGFYFIPGALSIEEQCYWIRESLKTFPQPPNRTNLTALYGPIFDLLTAAKSGKILVEVGNPNDQERSEQNSDGRKSNSFKFLEDTEIHKGEVCRSTAATTLVRKLRWSTLGLQFDWSKRNYDVSLPHNKIPDLLSALAKKMAIPAMPSGEEFKPEAAIVNYYGPSDMLGGHVDDMEADWSKPIVSISLGCKCIFLLGGKTRDEVPTAMFLRSGDIVLMAGEARECFHGVPRIFTGSDQAEISALVPQLSAEDDSFILNYIQNSRININIRQVY</aaseq>

Gene Sequence

<dnaseqindica>1..347#503..1024#1088..1181#2178..2380#3336..3554#3653..3822#4451..4800#5647..5785#5883..5949#6031..6152#6256..6395#ATGCAGATGAGCAGCGGCGGCGTCGGCGTCGGCGGCGGCGGAGGGAGCAAGGTGATGTCGCCGAAGCAGGTGCTCACCGTCGTCCTCGTCGTGTTCTGCGCGCTCTCCTTCGTCAAGCTGCTGCTCCTCACCGGCTCCTCGTCGCCCGCCGCCGCCGCGCGCCGCGGCCGCGCCTCGGCGTGGGGGAACGGGACGGACGTGGGGGACGGCGGCCTCGCGCCCAAGGAGGCCGCACTGCTCCGGTCCGTGGTCGCCGCGCGCGCGCCGTGCCGGCTGCTCGTGTTCGGCCTCTCCCCGCAGCTCGCCGCGCTCGCCGCGGTCAACGCCGGGGAGGGCGCCGACAACGGGTTCGTCACCGACAGAGCCGAGGACGCCGACAGCGCGCGCCGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGTCACCGACAGCGCCGAGGACGCCGACAGCGCGCGCCGCTCGCTCCGCGGCGGCTCGGCGGCGTCGGCGGCGTCGGCGGCCAAGATCCACCAGGTGAGGTACCGCGACGCGGCTGGGGAGGCGTGGCCGCTGCTGCGGCGCGCGCGGGACAGCCCGGCGTGCCGGCGTCCGACGGGGGCGGTGCGCAGGTCCGGCTGCCACCTGGCGCTGATCACCACGCTGCCGCGGGAGGTGCTCGACGCGAGGTGGGACGTGCTCGTCGTGGACGGGCCGAGCGGCGCCGCCGCCGGGGAGCCCGGCCGGATGGGCGCCATCTACACGGCGGCGGCGCTGGCGCGCGCCTCGGCGGCGGGAGGCCGGGAGGCGGTGGACGTCGCCGTGCACGATGTGCACCGCACGGTGGAGCGGTGGTACGCCTGGGAGTACCTCTGCGAGGACAACCTCGCCGCCGCCAAGGGCCGCCTCTGGCACTTCCGCGTCGCCGGCGGCGGCCCGCCGGACGCGTTCTGCTCGACCGGCCCCGCCCAGATCTTGTAAGGATGGCCGGACCAATAACCAATGCTCCCCGGAGACATCGCCGGTTCTTGGCAATGCAGCACACAGATCCCCCTTCCATCGGCATCGCCGGAGACAGGAGCCGTTCTTGAAGACGGCGACGGCGACCGCGCAGTTGGTTTGTTCATAGCTAGTGTGAGCGGAGCTAATGTGAAGAATTGATCTTTCTACTCTTTAGGTACTGGATTGATGCAATTCCATAGCTCGAACTGAATTCCTTGATGGTTGATGCAATGCAAAGACAAGCAGAGAGTTTGTAAAGTGTATACTAGTAAACCGAATTGTTGTTGTTTCACTGCCTGTTTGTTTTCTTTTGTTTGTTTGGAACAATAATGAAGTGATAATCCCATTTTTTTAAAAAAAAATATTGGGTTTGAGATTGATGCATCCAGAGGTTCAGCTCTTGCAGCTGTGATGAAATGCTATGTTCTAATTAATCATGTTTGTTCTTCATAAAGTGGTTTTCTGTGAGTTCTGTACTTCACATTAGAACAAGAAGCAAATTTGATGAAGAATTTGTGTGGGCTACAAGAACAGCACGTCAATGAACTGCAGGAGGAGCTGGATTTAAAACACAGCTTTGTAGGAAGCACATTTCAAATACCTATAATTGTCGTCAAATAAACAAGATCTGGTGAAAGAAACAGTTACAATTATCCTCAAACCACAAAATTTCGTACGAGGGATTTCATAGCTGCAGAGGAAATACATCCTCGTCCTCTTTATTCTTGCTGTCCTCTTCAAGAATCCTTTGTCATTTTGCTTGGTCATTTAATTCTCTCCACATATACTTTAATGTGAAAGTTTTCTCATTGTTTTCTGATTTATATACCGCATGGGCATTCTTCATTATCATATCATCAGAGTATCCACTGCTCCAGGTGCTTCTAGCTCAACAATAAGCTCGACAAAATTTTATAATATCCTTCTTAACACCACCCCAATGTGTATTGTATTGCATGACTCTCTTTTTACGGTTATTGCTAGATGTGTTGTTATTGAACCAAGAGCCGAGGAGTTGTAAATTTTCTTCTCCAGTCTAATTGACATGTGTTCCTCAACTCATTACCTCTTGGCTATTATCACTTGATTCTTCGATATTAACTAGATTGTTCTCTTTTTGTCTTGCAGGGCGCTAAGAGGTTGATTCTAATCAATGAGAAGAGACAGACCCGACAACTTGATTTGGTGAGTGCACCCAACTTTCTTGAGGACAAAAATCTTGAAAGCTTATCGGCGCAGATTATAATCAACTTACTTGCTACTGAAAACCTTGAAAGTTTGGAGAACTGCCATATAGGTGATAGTTGGCTGGAGGACCAAAAGGGTGGAAGGTTTGAAAATTAGGTGGTAAGGATTGGGTAAATTGTGAGGATTATGGAAACTGTGATTAGGAGAAAGTGGAGGGAAATTGGGTAGGAGTGGAGTTTTGGCTAGAATGTTGGCTTGGGAAGCCTTAGTTCAACAAGTTCACGAAACCTCTCTAATGGATCCACCTCAGCTAGCGAGGTTTCACAAAATGTGTATATGTTGATTCAACATGTTCATAAAATCTTGAGTCATCTATGCTTTTTTTAGAGGATAAAGATGCAACATACAAAAGGCAAGAGAGGCAGGGCATGCAATGGTTGGGAGGAGCAACGGGCACCTGCTTTTTAAATTTTGCTATTAGAAAATAACGTGTACATGCATATTTTATTTCCTTATACCTGTGGCAGTAGTGTTGCGATCCGGGTGTAGTTATATATCACTTTCACAGTGCTTAATACTCTGTTTTATATTATAAGTCGTTTGACTCTTTTAGTAAGTTTATAGAAAAATATACTAATACGTTAAATATAAAATAAATACATTATCAAAATATATTCAATGCTAAATTTACTAAAACTAATCTGGTGTTGTAAATACTATTAGTTTTTTCTATAATTTAGTCACATCTAAAGAACTTTGACTAAGAGCTAAACAACTTATAATATGAGACATAGATTACCCGATAGTAGGAGTTTATTACTCCCTCCATTCTAAAATATAAGGCACAACCACTCTTAACCCAAAGACCAAGAAATAATTATTATCATATTCTAGTTTAAATCATCTTAATAAATATAATTAGAGATCTTAAGGGTGGAAGATTAAAAAAGTAATAATTTAATAGAGAAGATGTTCTAATTAATTGTATGCATACATCATGTTTTATATTATGTAACTTCAAAAAATAGTTGTGGCTTGTATTATGTAACGGTATGTAACGGAGGGAGTACCTGGTTTCGTGAAAAATAATGGTGGCAGGAAATTCCCAGGTCAAAACCCTGACCACGCTTGTTGGGCCCACCGGTCAGCCACTAGGCCACCGCCCACAGACAGACCCGTCAGAAAACCTCTCCCTCCGGCGATGTACGGCGACACCGAGCCGGCCGCCGCCGCCGCCGCGGAGCGCACGGCGTTCCGGCGAGCCGAGAAGCAGTACAAGCTCTACAAGCCGCTGAAGCCCAAGGGCGGGAGGGCAAGGTCTCGATCCCTCTCCCTCTCCTTCCCCCTCTCTCCCCCTGTCCACACGCATCCATCCATCCATCTATCTAGCCGCCCTGACCTCTGCAGCGCTGCAGGAGCAAGCCGGGAGGCGGCGGCGGCGGCGGAGGATTGGAGGACCTGTCCGCGGTGGTCGACTTCCACGCGCTGCTCGCTGCCGCCGCCGGCGGCGGGGGGGAGCTGCCCGCCGGGATCGGGAGGCGCGACGTCGCCGGGTTCGACCTCTTCTGCTTCTTGGACCGACCTGGTAAAATCTGGGAGCTCCACCATTCGCTTCACAGTTCGATTTCTCGATTGTTCATGGCGGCTAGTTTGGGAGCTTCGGATTTTTGATCACCCTATCATACTCCATAGATGCTTTCTTGGCATACTACTTGCTTATTATTTTTATATATACTCTTTTAGCACCTAATGTATTTTGATTCAAGTATTGTTTTGGGTATACTACTACTTTGCTTGTTATACTCGCAACATTGCTTGATTTGTATGTGATCACAACAGTGTGTTACTTTTGTCATGATTGCTCTGGTAGCAGCAAGATACCAAATCCTTGGTGTGATTCATTCCTGGATGCCATCTTACTACCTATGTAACATATGCTAGACTTGTATTGTTATTATACCTTTGATGGAGGCATAGAGCTCACTCTGAAATTTAAGATAAGTTTGGTCATTTAGAATAAATCCAGAAAGAAAGATGGTGCGCAAGCTGCAACAAATATTATGTAGTCTATTTGATTATAATTCAACTAATACATTGCTCAATTTAATATTGATTCTTCACATCGTACATTGCACTTCCTATTGGTCATATTTCTAAAAAAAATCATAATGTTTGTGACACTTAATGATATCCTTCTTGTGTTAATTTTGTAGGATTCTATTTCATACCTGGTGCTCTATCTATTGAGGAACAATGCTATTGGATCAGGGAAAGCTTGAAAACCTTCCCACAGCCTCCTAATAGAACTAACCTGACAGCTTTGTATGGTCCAATTTTTGACTTACTCACTGCTGCCAAAAGTGGAAAGATTTTAGTCGAAGTGGGAAATCCCAATGACCAAGAAAGATCCGAGCAGAACAGTGATGGAAGAAAATCCAATAGCTTCAAATTTCTTGAAGACACAGAGATACACAAGGGGGAGGTATGCAGGTCAACTGCAGCAACTACCCTTGTTCGGAAACTCCGATGGAGTACCCTTGGTCTGCAATTTGATTGGTCAAAAGTATGTCCCTTGAGCTTCGATGCCAGTTTTATACTAGATCTTTATGTTGTTTTCTCTTGTTTGATTGAACTATTCCAGCTTGTAGTGCTTTTGATATTGTCTAGTGATACTTAAGTAATAGATAGATTTTACCTTTCCATTAGGATTTCTGCAATTGTTCCAGTCATGCTGAATTCATTTCAATCTTGGTATTATTATGAATCTATATAGTTCCATTGCAGTATATAACAAAATTATTCCCTACCCATTAATCGATATAATGCAAATTCTGATCTTATAACATAAGGATTAAGGCGGTGACGGAATAGATAAAGATATGAAAGGAATAGACTTGTATGATAAGGACGGAAAATACATTGTTTTGGTGACAGAATAGGAAATAAATAGCACATGTTAGGGTAAAGTCATTAAATTTACATCCTAACCTTTTATATTTATCAACAAACCTATTTAAACTATGCACCTTCTCTCTCTTTTTTTAATGGAGGTAGTAGAACTCTAAGACATGCTCACATACATTATTTTTAAATAATTGATAAAAATCTGACCTCTATGCCCAAGTGGGATATACACAGCCAATTCTACAGACTTAAGGAATTTTATTTTAGTATGGCTGTTCTGCAAGCTATGTGCCTGAACATTACAACCCCTGAAAGTAATGTCAAAATAATCTCACAGTGCTTACATCATATAATTATATCATCTTGTTCAGCTTGAAATTTGAGGCATACTGGCAATCTTTTGACATTACGGAGATATGCAAAGGTTGTACAATTAGCTCTTCCTAATGACAACTTAACCAAGGATGCTAATGACTTCTTGTGTAAAATCCTTCTGTCACTACAGCGCAACTATGATGTATCACTTCCACATAACAAGATTCCAGACCTCCTATCTGCTCTTGCAAAAAAGATGGCCATTCCAGCCATGCCATCTGGAGAGGAATTCAAGCCAGAGGCCGCCATAGTGAACTATTATGGCCCAAGTATGTAATTTGCTCCTTCAACAGTGACTGTCCTTTTAGATTGATATAAATGATAGGAAATAATCTCAAAGTTTCATGTTCCTATCCCTGTCTATAGGTGACATGCTTGGTGGCCACGTTGATGACATGGAAGCAGATTGGAGTAAACCTATTGTAAGCATAAGGTAATAATTATGCTTCACTAACTTTTTCATGTTATGATGTCACTCGATCTTAACAAAGTGGCTTCCCTTTTATAAATTTAGTTTGGGGTGCAAGTGCATTTTTCTTCTTGGAGGCAAAACGAGAGATGAAGTTCCAACAGCAATGTTTCTGCGAAGTGGTGATATCGTATTGATGGCTGGGGAGGCACGGGAATGCTTCCATGGTAATGCATTTTACTGAACTAAAGTTGTTTTTAGTGGTAATGCTAATTCAAACACCATATTTATCATGTTCCTATTTTTATCTTTCCCGTCCTCTTATCGCAGGTGTTCCACGAATCTTCACAGGAAGTGATCAGGCAGAAATCTCTGCGCTGGTTCCGCAGCTATCTGCTGAAGATGACTCTTTTATCTTAAACTACATTCAAAATTCAAGGATAAATATCAACATCAGACAAGTCTACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA035274