BGIOSGA035285

From RiceWiki
Revision as of 09:05, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA035285| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA035285, complete gene.| tag = OsI_361...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA035285

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA035285, complete gene.

LocusTag

OsI_36150

Ensembl Transcript ID

BGIOSGA035285-TA

Ensembl Protein ID

BGIOSGA035285-PA

Length

5803

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:13962868..13968670

Sequence Coding Region

13962868..13962873,13963236..13963305,13965385..13966256,13967210..13967299,13968173..13968434
,13968651..13968670

Genome Context

<gbrowseImage1> name=IndicaChromosome11:13962868..13968670 source=RiceIndica11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome11:13962868..13968670 source=RiceIndica11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAAGCTCTTAGGTTGGATGCATCGAAAGCTACGGAGTAATAATGACGTATTCAAAGAGTTCAACACCGGAGGAGGTGGGGCCTGCAACTGCATCGCCGGGCTTGCCTCGCCTGACCACGACAACGACTACTTCTCCGGCGACGACGCCGCCCACGCCTCGCCGCCGGTCACCGCCGGCGACCTCTTCACGTTCGGCGGCGGCGGCCTTCTCACCATCGGCACGCTAGGCATCGCCGCCGTCGCCATCCCCGGAGGCGGCGACGATGACTACGACATCGACTTCGAGGTGGACGCCACCAGCGACGACGACGGCGGCTTCACCGTCGAGGACGACGACGCCGACGTCGGCGGCGCCGTCACGCCCACCTTCACCTTCCCCGCGGCGACGGCGGCGGAGGCGGTCGTCGCCACCGTGGAGAAGGCGGTGGCCGCGGTGGAGGCGATCGCGGAGAAGGACGACGACACCACCACGGAGGACGACCTGATGGTGGTGAGCGCCGAGCTGGAGAAGGTGCTCGGCGGCGTCGACGTGGCGTCGGCGCGGGTGAGCTTCGCCATGGGCGGCGGCGTCGGCGTCGACTGCCCGCTCCAGGGCTTCCTGTTCGGCTCCCCGGTGAGCGACGTCGAGTCGCGCCCGGAGTACCTGCAGGCGCCGCGGGACTCGTCCGGCTCCTGCGGCGGCGGCGGGCGGCGCACCTCGCTCGGCGAGCTGTTCATGCGCACCCGCTTCGCCGACGAGAAGGTGGCGCTCGTCGCCGTCGCCGAGGGCGAGGACGGCGTCGCCGGCGACGACGGCGCTGCTGCTGCCGGCGTCGGCGGAGACAGAGCGGGGAAACGCGCCGGCTACAAGACGATGAAGAAGAGGAAGGTGAAGGACGAGAAAGGCGGCGGCGGCGCCACCGGCGGTGGAATGCCGGCGACGGTGACGAAGAGCAAGTTTCAGAAGTTGGAACATTCAAGATTCAACTCTGATTCACATGATCTCGAACTCAATATCTCCAACTTTATAAAAAGACAAAAAGATTACTGCTCAACGATCCTTCAAATCTTCCACAGGAAAGTCTACCCCGAGAACACACTCCTGACAAGGAACCTGACCAAGAAGAGCCGCAACCGCGGCGCGGCCACCGGAGACCCCGACGAGCCTCTGGCCTCGCCGGTGCTCCGGTGCCGGAAGGACCATCCCATGAGGGGCTTCGGCTGCTGCACCAATGGCGCCTTCGGTGCATCGTCACCGGGAGGCAACGGCGAGATGAACGGCAGCAAGAGCGGCCACTGGATCAAGACTGATGCCGACTACTTGGTGCTGGAATTATAA</cdnaseq>

Protein Sequence

<aaseq>MKLLGWMHRKLRSNNDVFKEFNTGGGGACNCIAGLASPDHDNDYFSGDDAAHASPPVTAGDLFTFGGGGLLTIGTLGIAAVAIPGGGDDDYDIDFEVDATSDDDGGFTVEDDDADVGGAVTPTFTFPAATAAEAVVATVEKAVAAVEAIAEKDDDTTTEDDLMVVSAELEKVLGGVDVASARVSFAMGGGVGVDCPLQGFLFGSPVSDVESRPEYLQAPRDSSGSCGGGGRRTSLGELFMRTRFADEKVALVAVAEGEDGVAGDDGAAAAGVGGDRAGKRAGYKTMKKRKVKDEKGGGGATGGGMPATVTKSKFQKLEHSRFNSDSHDLELNISNFIKRQKDYCSTILQIFHRKVYPENTLLTRNLTKKSRNRGAATGDPDEPLASPVLRCRKDHPMRGFGCCTNGAFGASSPGGNGEMNGSKSGHWIKTDADYLVLEL</aaseq>

Gene Sequence

<dnaseqindica>1..6#369..438#2518..3389#4343..4432#5306..5567#5784..5803#ATGAAGGTCAGTGTTTCATCTATTGAACATATCCATGCTTATTAGTTTCGTAATGCAGATACTAAGTTTATGTATATGTAGTTCTCTTTTGGAACTTGAGTTTTGTTAATTTCTTTTTGTAAATATTTTTTGTTTGGTTTGGTTGCTGGCTTAGCTGATCATGCTTTCTGGGTTTGAATAAATGTATAGCTACAACTATTCCTGTATTCTGTTTTTCCATCATTGCCATCGTCATCATCTTCATTGTCATCATCATCTTCTCCTTTTGACGATCTTGATCAGATCTTGATTAAAAGTAATATAGACCATGCATTTTCATGATTGATGAAGTTCATTAAAAATTCTGACCCTCATGTGTGTATGATCAGCTCTTAGGTTGGATGCATCGAAAGCTACGGAGTAATAATGACGTATTCAAAGAGTTCAACACCGGAGGAGGTATGCACGCACAACTTAATTAATCTATTTTTTTTACTTCCTTTCTTATGTTTAATTGATGAAGTATAATTTTTTGAAAAATACGGTACAAATATAAATATAAGTGCTCATAACACAAGCGCTCTCACCACCTCTAGTACTCTCTCCAGTGTTTTTATATAGTATTAAACTAACGTCATATAAAAAAAATTGAAGTTAGTATATATATATATATATATATATATATATATATATATATATATAATAGTTCACCGGTACAGAAAAAAAAAGAGTTGTCTCTGGTTTTAGATCTGCATGCATGCCCACAATAATGGGAAAACCACTGCAAAATTATCACGGGTAGCCAAGGCATAGCAAGCTTGGCTACTAAAAAAGCATATTAATTGTTGGCCGGCCGGTCCCACATGTCATTGACCAGATTAGCCGCCTGAAGTGCTGAACTGTATGGAACACTAGCAATCATCAATTGGAGTTTTGCACTCTTGCGCTTGGTCACATTGGAGATGGCACATCTATCTATAATATCACACATGCCACTCTTTTTCCAGCCTCAATATATATAGTTCCAGCATTAGCTAGCTAGCTAGACCAACTATTGCATAGCAAGAACCCTATATTATCATTTTGCAGATAACATTTTCTTTTCCATGTAGCAACATTGCCATGGAAAGATCACGAGGGCATGTCTATCTTTTGTGGAACTCTCTCTCTCTCTCTCCTTTTGAAGGCTTCCTTTTAGAGTTTTCTCCTTGTTTGACTGTTGTTCTTAGGTTCAATATGTTAATATCAGAGTTTTCGCCCGTTTTTTATAAATCAATTGTGCCGTTGTAAGATTTTTGTGTCCAGTTTTCGTTATAAACTGGACCTCTCTACCTGTTCCCTCGAGAAAAATGGTCCAAGAGCATTCTCGACGATTCAACAACTAGAATTCAACAAATAAAGATTTTTATATATGGTGCATATGGAATGGTGAGATATTGTATTTTTAGTGTGAGATACCAAAAGAGCTACAACAAATTAATACAATAAAATAAGGGAAATTTCATGGACTAACTAGTTAGAAACATATTTCGAGTAAATGAAAATTTTATTTTATTACCTTGGTTTTCTAAAGACTTATAATAAGTGCCGTCAAACATCTAAAATGTTAAATTCTTAATAGATGAAAAGTATTAGAATTTAAAACGTGAAAATTATATACTTTTTGATGAAAAGTAGTAGGAATGTGAAAATTATATTAGTAGACTTTTTTTGACGAAAACTCTTTCATATAGTTATATGTTAATTTTTTATAACTATATAGTTTGAGAAAGTAATCATATAGCTTTTGCATTAAAATAATGTGTCAATGTCCAAAACATTATCTTAATTAACCCGGTCCTTCTCCTCCCAAAGAAACACATAAAAAAGGACAAAAACCAATACATCTTGAAAAACTTACATAGAAAAAGCTGAATCATATTTTATATCACCCTGATCCCGTTGCAACTTGCAACGCACATGAATGTAACTATTTCTTTTTAAAATGGTGTTGTACTTCATAAATTTGAAACAAAAAAATACATATAATGTAACCCTTTTAACTGTTTCTGAAACACATCAAAACTTTTCTTTCTCAAAAAAACAAAAGAAAACACATGAAAGCCTGCATAATTTTGCATGCAAATGATCGTACTCCTTTCTTTTCAGGTTATAAGACTTCTTAGTATTTTCCATATTTATATAGATATTAATAAATCTAAACACACATATATGTGATTTATTAACATATATATGAATGTGGACAATGCTAAAAAGTCTTATAATATGAAACGGATAAAATATTTAATACTCCCTCCATTTCTAAATATTTGACGCTGTTGACTTTTTTAAACATGTTTGACCATTCGTTTTATTCAAAAATTTTAAGTAAATATTAATTATTTTCCTATCATTTGATCATTGTTAAATATACTTTTATGTATACATATAATTTTACGTGTTTCACAAAAGTTTTTGGATAAGACGAACGGTTAAACATGCGCTAAAAAGTCAAATATTTATTAGAAACGGAGGGAGTAATTCACTGTGTGACTGCAGGTGGGGCCTGCAACTGCATCGCCGGGCTTGCCTCGCCTGACCACGACAACGACTACTTCTCCGGCGACGACGCCGCCCACGCCTCGCCGCCGGTCACCGCCGGCGACCTCTTCACGTTCGGCGGCGGCGGCCTTCTCACCATCGGCACGCTAGGCATCGCCGCCGTCGCCATCCCCGGAGGCGGCGACGATGACTACGACATCGACTTCGAGGTGGACGCCACCAGCGACGACGACGGCGGCTTCACCGTCGAGGACGACGACGCCGACGTCGGCGGCGCCGTCACGCCCACCTTCACCTTCCCCGCGGCGACGGCGGCGGAGGCGGTCGTCGCCACCGTGGAGAAGGCGGTGGCCGCGGTGGAGGCGATCGCGGAGAAGGACGACGACACCACCACGGAGGACGACCTGATGGTGGTGAGCGCCGAGCTGGAGAAGGTGCTCGGCGGCGTCGACGTGGCGTCGGCGCGGGTGAGCTTCGCCATGGGCGGCGGCGTCGGCGTCGACTGCCCGCTCCAGGGCTTCCTGTTCGGCTCCCCGGTGAGCGACGTCGAGTCGCGCCCGGAGTACCTGCAGGCGCCGCGGGACTCGTCCGGCTCCTGCGGCGGCGGCGGGCGGCGCACCTCGCTCGGCGAGCTGTTCATGCGCACCCGCTTCGCCGACGAGAAGGTGGCGCTCGTCGCCGTCGCCGAGGGCGAGGACGGCGTCGCCGGCGACGACGGCGCTGCTGCTGCCGGCGTCGGCGGAGACAGAGCGGGGAAACGCGCCGGCTACAAGACGATGAAGAAGAGGAAGGTGAAGGACGAGAAAGGCGGCGGCGGCGCCACCGGCGGTGGAATGCCGGCGACGGTGACGAAGAGCAAGTTTCAGAAGGTAACTTTTTTTTTTTGGTTGTTGCTAGCATTTTAATTTGCTTTGAAGAAAACTATAAAATATCTGCAATTTTGGCTGACTATTTCATGAGGTTTCCTTGGATATGATCATTTGATTAATCAGTTCGTTCGATTGCTATAGTTTTTTAAGGATCGTAAAGGGCCTTTCCCACCCAAAAGCTAGCTATTGAGGTGAGGGGCTCCCACAACCACAGTTATATCTTAGGTCCTTTGCCCTTCCACAACCAATGTGGAACTATTCAACAATCTTCCCCTTCACACATTGGTGTCCCTCAGCCCTTCAACCGTATCCGGGCCCCACTGGCCCCTTCCACAACCAATGTGGGACTATTCAACAATCTCCCCCTTCAAACATTGGTGTCCCTCAGCCCTTCACCGTATCCGGGCCCCATCGGCCCACGGTCCATCAGGTATACGGGCCCCGCAGGCACCCATCACCGTATCCGGGCCCCATCGGCCCACGGTCCATCAGGTATACAGGCCCCGCAGGCACCCACGGTCCATCAGGCCAGAGATGTTAACCTAGCCAGGCTCTGATACCAATTGTAGAATCGTAAATGGCCTTTCCCACCCCAAAAGTTAGCCATTGAGAGGAGGGGCTCCCCATTATATCTTAGGTCCTTTGCCCTTCCACAACCAATGTGGGACTATTCAACAGTTTTAGTACATTTTTCTTTAATTAATATGTAATAAAACTCAAGAGTTATTGTGAGTTTATTTTTTTTATTTTTGCTTCAGTACGTGCATTTTCTACTAGTGAAACTTCAATATTAACCAGGCCAGTCGACATTTCTTAATTGTGATTTGATTTAAGGGTCAAGATTAGAACTATAGATTGAATATGCAAAGTTTCAGCTCGGACGACATTTGAACATTTGACTAATTATATATTTCCGAGTTCAATTGTTTGCCGGTAAAATTCTGAACTTGCAGTTGGAACATTCAAGATTCAACTCTGATTCACATGATCTCGAACTCAATATCTCCAACTTTATAAAAAGACAAAAAGATTACTGCTCAACGGTGAGTTTAATGAAGGAATGCTCATCACAGCAAATCCATAATTCTATATAACTCTCTGTAATATGTAATGGTAAGAAACAGATATTCATGATTAAATCATTTTTCCACTTCAGAAAGAAATACTGATTTTTCGTGGTACATCCAAAATTACTCCAAGGTTTACACTGAATTTCACGCTGTTCTTGGTGTTTAAGATTAATTTTAGGTAGATATTTTCTAGTCCCGCAACAAAGCTGACAATGAAAACCCCAAAACTAATCCTAAATGAAATTCTAAAATTAAGAAAAACAGCTTTGGATTATAAATTTTAATAGTAAGTCCAAGGAAATAGCCAGCAATGTTAATAAGATTGCTGATAAGAATATATAACAGTTTGGAGCCAATCCATTTCACATGTGTATCCTGCTCTGGGACATAAGTAGACACAAATCCCGAGTTTTGACTATCATCTCATAATCGGAAGATCTTTCACTGTGTCGTCAGATTCGAGTTAAGTTTCTGTAGACCAACTTGGTGTGTCAATGGTGTTGTTAGGAGTGGGGATACTGGGGGCAGTGAGTTGACATGCGATTTGTTTGCAATCTCCTGTCTAATGCTATCTTTATGGATCATTTCATTTGTCATTTTTCGTTTGCCCCATAAACAACAAGGGATTCTTGATTTGATATATTATACATCCTTCTAGGTGCTCTCTTGCATTTCTTTTCCTTGGAGAGATGCTCCAAATATCCCTCAAAAGAAATTCTAGATTCCTCTTGCTACTACTTGATACTTACATTTAATTTTGTTATAACAAACGAAAGAAACTGAGTTTCAGAAAGTGATCAAAAGTTGACAAATGTTCTGAAATGAGGAAACATCTGCTCATTGCAGATCCTTCAAATCTTCCACAGGAAAGTCTACCCCGAGAACACACTCCTGACAAGGAACCTGACCAAGAAGAGCCGCAACCGCGGCGCGGCCACCGGAGACCCCGACGAGCCTCTGGCCTCGCCGGTGCTCCGGTGCCGGAAGGACCATCCCATGAGGGGCTTCGGCTGCTGCACCAATGGCGCCTTCGGTGCATCGTCACCGGGAGGCAACGGCGAGATGAACGGCAGCAAGAGCGGCCACTGGATCAAGACTGATGCCGACTGTGAGTAGCACTGCACACCTTGGTGTCTCTATCCATCTTCAATGGATCTATCTTTGCAATCATGCATTCAGTCTTGACAGCTACATCTTTCCATACTATTTTTGGGGAATCTTCCAAGAGCTATCCACCACTAGTTTCTGAGTTACTGTGTGCTGATGCACACACTGCATACATTGTGCTTTTTCACTGAAACCCTGTCTCTCTGATCTGATGCAGACTTGGTGCTGGAATTATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA035285