BGIOSGA035446

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Revision as of 09:07, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA035446| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA035446, complete gene.| tag = OsI_364...")
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Gene Name

BGIOSGA035446

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA035446, complete gene.

LocusTag

OsI_36493

Ensembl Transcript ID

BGIOSGA035446-TA

Ensembl Protein ID

BGIOSGA035446-PA

Length

4324

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:17503241..17507564

Sequence Coding Region

17503241..17503351,17503497..17503607,17503695..17503782,17503870..17503936,17504043..17504118
,17504201..17504318,17504577..17504822,17504915..17505054,17505140..17505322
,17505416..17505535,17505694..17505726,17506021..17506138,17506397..17506642
,17506735..17506874,17506960..17507142,17507236..17507355,17507514..17507564

Genome Context

<gbrowseImage1> name=IndicaChromosome11:17503241..17507564 source=RiceIndica11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome11:17503241..17507564 source=RiceIndica11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTATACAAGTGGAACAACTGGAGACCCGAAGGGTGTGATAATCACAAACAGAGCTCTAATTGCCGGTGTTATGACCACAGAACATCTTCTGAAAGTGACAGACAAAGTGGTGGCTGAAGATGATTCCTACTTTTCCTATCTCCCATTAGCTCACATATTTGATCAAGTAATTGGAAACTACTGCATTTCTAAAGGAGCCTCCATTGGATTCTGGCAAGCGGACATTAGGTATCTCATGGAGGATGTGCAAATGATGAAACCAACGGTATTTTGTGGTGTCCCTCGTGTTTATGATCGTATATACACAGGTATTAATCAGAAAATTCAGTCTGGAGGGATGATAGCCAAAAGCCTTTTCCAGTATGCATACAACTACAAACTTGGAAACTTGCGGAAAGGGTTGAAACAGGATGAAGCCTCGCCATTTTTTGACAAAATAGTTTTCAGTAAAATAAAAGAAGGGCTTGGAGGCCGGATACGACTCCTTCTATCAGGAGCAGCACCTTTGCCAAGGCACGTCGAAGAATTCATGCGGGTTACCAGCTGCAGTGTACTTGTACAAGGATATGGGCTAACAGAGAGTTGCTCAGGATGCTTCACATCAATCGCCAATGTTTTCTCAATGATTGGATCAGTTGGTCCTCCTGTGACGACAATCGAGGCACGGTTAGAATCCATTCCAGAAATGGGGTATGACGCACTCTCAAATGTGCCTAGGGGTGAGATCTGCTTGAGGGGTCACACCTTGTTCTCCGGGTACTACAAGCGCCCTGACCTCACCGAGGAAGTATTCTCAGATGGTTGGTTCCATACAGGTGATATCGGTGAGTGGCAACCAGACGGCACGATGAAGATCATCGACAGAAAGAAGAACATTTTCAAGCTGTCCCAAGGGGAGTATGTAGCAGTGGAGGTCCTGGAAAGCGCATACGTGCAGTCTCCTCTCGTTACATCAGTTTGGGTCTATGGAAACAGCTTTGAGTCCTTCCTTGTTGCTGTGGTTGTCCCTGAGAAGCAGGCCATTGAGGATTGGGCTGCACAAAACAACAAGACTGGTAACTTTGCAGAATTGTGCAACGATCCGAAGGCAAGAATGTACATAGAGGATGAGCTAAACAAAACTGGCAAAAGACTAGGGTTGAGAGGATTTGAGATGCTAAAGGCAATTCACCTAGAGACAACGCCATTCAGCATAGAGAAGGACCTGGTGACTCCAACTTTTAAGCTCAAGAGACCCCAGCTGCTCAAATATTACAAGGATTGCATTGATCAGCTGTACAAGGATGCCAAGATAAAAGAAGGGCTTGGAGGCCGGATACGACTCCTTCTATCAGGAGCAGCACCTTTGCCAAGGCACGTCGAAGAATTCATGCGGGTTACCAGCTGCAGTGTACTTGTACAAGGATATGGGCTAACAGAGAGTTGCTCAGGATGCTTCACATCAATCGCCAATGTTTTCTCAATGATTGGATCAGTTGGTCCTCCTGTGACGACAATCGAGGCACGGTTAGAATCCATTCCAGAAATGGGGTATGACGCACTCTCAAATGTGCCTAGGGGTGAGATCTGCTTGAGGGGTCACACCTTGTTCTCCGGGTACTACAAGCGCCCTGACCTCACCGAGGAAGTATTCTCAGATGGTTGGTTCCATACAGGTGATATCGGTGAGTGGCAACCAGACGGCACGATGAAGATCATCGACAGAAAGAAGAACATTTTCAAGCTGTCCCAAGGGGAGTATGTAGCAGTGGAGGTCCTGGAAAGCGCATACGTGCAGTCTCCTCTCGTTACATCAGTTTGGGTCTATGGAAACAGCTTTGAGTCCTTCCTTGTTGCTGTGGTTGTCCCTGAGAAGCAGGCCATTGAGGATTGGGCTGCACAAAACAACAAGACTGGTAACTTTGCAGAATTGTGCAACGATCCGAAGGCAAGAATGTACATAGAGGATGAGCTAAACAAAACTGGCAAAAGACTAGGGTTGAGAGGATTTGAGATGCTAAAGGCAATTCACCTAGAGACAACGCCATTCAGCATAGAGAAGGACCTGGTGACTCCAACTTTTAAGCTCAAGAGACCCCAGCTGCTCAAATATTACAAGGATTGCATTGATCAGCTGTACAAGGATGCCAAGGTGGGAAATAAACAGTGA</cdnaseq>

Protein Sequence

<aaseq>MYTSGTTGDPKGVIITNRALIAGVMTTEHLLKVTDKVVAEDDSYFSYLPLAHIFDQVIGNYCISKGASIGFWQADIRYLMEDVQMMKPTVFCGVPRVYDRIYTGINQKIQSGGMIAKSLFQYAYNYKLGNLRKGLKQDEASPFFDKIVFSKIKEGLGGRIRLLLSGAAPLPRHVEEFMRVTSCSVLVQGYGLTESCSGCFTSIANVFSMIGSVGPPVTTIEARLESIPEMGYDALSNVPRGEICLRGHTLFSGYYKRPDLTEEVFSDGWFHTGDIGEWQPDGTMKIIDRKKNIFKLSQGEYVAVEVLESAYVQSPLVTSVWVYGNSFESFLVAVVVPEKQAIEDWAAQNNKTGNFAELCNDPKARMYIEDELNKTGKRLGLRGFEMLKAIHLETTPFSIEKDLVTPTFKLKRPQLLKYYKDCIDQLYKDAKIKEGLGGRIRLLLSGAAPLPRHVEEFMRVTSCSVLVQGYGLTESCSGCFTSIANVFSMIGSVGPPVTTIEARLESIPEMGYDALSNVPRGEICLRGHTLFSGYYKRPDLTEEVFSDGWFHTGDIGEWQPDGTMKIIDRKKNIFKLSQGEYVAVEVLESAYVQSPLVTSVWVYGNSFESFLVAVVVPEKQAIEDWAAQNNKTGNFAELCNDPKARMYIEDELNKTGKRLGLRGFEMLKAIHLETTPFSIEKDLVTPTFKLKRPQLLKYYKDCIDQLYKDAKVGNKQ</aaseq>

Gene Sequence

<dnaseqindica>1..111#257..367#455..542#630..696#803..878#961..1078#1337..1582#1675..1814#1900..2082#2176..2295#2454..2486#2781..2898#3157..3402#3495..3634#3720..3902#3996..4115#4274..4324#ATGTATACAAGTGGAACAACTGGAGACCCGAAGGGTGTGATAATCACAAACAGAGCTCTAATTGCCGGTGTTATGACCACAGAACATCTTCTGAAAGTGACAGACAAAGTGGTAAGCCTCTTAAATCAAACACCTGCAGGCTGCAGTTCTCAATAACTAATGAAGAATTGATCATAGCTTGTCCATTAAATATCAATATCTTTATATATTTCCTGAGATGTTATTCTGACCATAGTTAATACTAATATTTATGCAGGTGGCTGAAGATGATTCCTACTTTTCCTATCTCCCATTAGCTCACATATTTGATCAAGTAATTGGAAACTACTGCATTTCTAAAGGAGCCTCCATTGGATTCTGGCAAGCGGTATGAGCAGCACAATGAAGGATGAATAATTCTGTAGACTCTCTTCTTTGACCATCTGGCAGGTGACACAAACCACTTTCTTACCAGGACATTAGGTATCTCATGGAGGATGTGCAAATGATGAAACCAACGGTATTTTGTGGTGTCCCTCGTGTTTATGATCGTATATACACAGGTAAAATGCACAAAAAAATCAAATAATTGTCTCAATTGCAACCACATTTTGTGATTAGCGGTAATATGGGAATATCATGAATTGAAGGTATTAATCAGAAAATTCAGTCTGGAGGGATGATAGCCAAAAGCCTTTTCCAGTATGCATACAACTAGTAAGTACTGCTTATAAAAAACATTGAAAATACATGTATCACTTAATCCTGTCCAACTTTACAGTTCTCGTATAACTAAATCTGTCACATTGTCATCACTCATCAGCAAACTTGGAAACTTGCGGAAAGGGTTGAAACAGGATGAAGCCTCGCCATTTTTTGACAAAATAGTTTTCAGTAAAGTACGTGCAGATTTTAAGACAACTTTTCATTTTCCCCCTTAGTTAGAACATCTATGAAATAATTTTATCATTTATGTTACAGATAAAAGAAGGGCTTGGAGGCCGGATACGACTCCTTCTATCAGGAGCAGCACCTTTGCCAAGGCACGTCGAAGAATTCATGCGGGTTACCAGCTGCAGTGTACTTGTACAAGGATATGGTGAGTTCCAAAATTCATGTGGAAAATGTAGACTTTAACCTGGACCCATCATAACCATATAGCAACTTAGCATGGTTAGTTAGTTGGTCCTGATTCAGTTCAGTAATTGACCTGTTATGGACTTAAAAGATGTAAAATGCTTGTATTTCTTTAATTTCCAAATTAGCATTAGTAATCTTAATCATAAACTCATAGCATAAATATACTTACTTGTACAATCCCGAGAAGCATATCACTCACCATGCTCTTGGTATGCAGGGCTAACAGAGAGTTGCTCAGGATGCTTCACATCAATCGCCAATGTTTTCTCAATGATTGGATCAGTTGGTCCTCCTGTGACGACAATCGAGGCACGGTTAGAATCCATTCCAGAAATGGGGTATGACGCACTCTCAAATGTGCCTAGGGGTGAGATCTGCTTGAGGGGTCACACCTTGTTCTCCGGGTACTACAAGCGCCCTGACCTCACCGAGGAAGTATTCTCAGATGGTTGGTTCCATACAGGTAAAGTCATTTACCCTCAGTTTCACGCCTTACTGAATGATCTGAAAGTGGAGATAAATTGTCTCAAATAAGCAATCATCTTATGTATGAAGGTGATATCGGTGAGTGGCAACCAGACGGCACGATGAAGATCATCGACAGAAAGAAGAACATTTTCAAGCTGTCCCAAGGGGAGTATGTAGCAGTGGAGGTCCTGGAAAGCGCATACGTGCAGTCTCCTCTCGTTACATCAGTATGACAACTGAAACAAAAACTAAGTCAAAGTAGTAACACATTTTTTTTGAGGTTCAACTTACCAAGAATCATCTTTGAATCAGGTTTGGGTCTATGGAAACAGCTTTGAGTCCTTCCTTGTTGCTGTGGTTGTCCCTGAGAAGCAGGCCATTGAGGATTGGGCTGCACAAAACAACAAGACTGGTAACTTTGCAGAATTGTGCAACGATCCGAAGGCAAGAATGTACATAGAGGATGAGCTAAACAAAACTGGCAAAAGACTAGGGGTATGCCGATAACCGTCATGGAAATTATTATTTAAGTTAACTTCTATTCATGATTAATGACAATTCATAAGACATTATTCTTGTGCCATGCAGTTGAGAGGATTTGAGATGCTAAAGGCAATTCACCTAGAGACAACGCCATTCAGCATAGAGAAGGACCTGGTGACTCCAACTTTTAAGCTCAAGAGACCCCAGCTGCTCAAATATTACAAGGTTAGAGAGAACAAACTCTATAACCATGATTTCCTGGTTTTGTTCTTATGATTTATTTTACGGATGCAAACATGTGAATGAAGTTCTTCATGACATTATTCTGGTGATCTTTATAAGACTAAGCATGTGGATAATGGTAGCACATTTTTTTAATGCAGGATTGCATTGATCAGCTGTACAAGGATGCCAAGGTGGGAAATAAACAGTGATGGTAAAACAGAACCAAGTGGTTATTGAATTTCATGATTATTCAGAAGGAATCATGTACATATCAATAATCATGATTCAAGAGTTAAAGGCCTATCTTTTTAAGATAAAGAGTTAAAGCCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTGACAAAATAGTTTTCAGTAGAGTACGTGCAGATTTTAAGACAACTTTTCATTTTCCCCCTTAGTTAGAACATCTATGAAATAATTTTATCATTTATGTTACAGATAAAAGAAGGGCTTGGAGGCCGGATACGACTCCTTCTATCAGGAGCAGCACCTTTGCCAAGGCACGTCGAAGAATTCATGCGGGTTACCAGCTGCAGTGTACTTGTACAAGGATATGGTGAGTTCCAAAATTCATGTGGAAAATGTAGACTTTAACCTGGACCCATCATAACCATATAGCAACTTAGCATGGTTAGTTAGTTGGTCCTGATTCAGTTCAGTAATTGACCTGTTATGGACTTAAAAGATGTAAAATGCTTGTATTTCTTTAATTTCCAAATTAGCATTAGTAATCTTAATCATAAACTCATAGCATAAATATACTTACTTGTACAATCCCGAGAAGCATATCACTCACCATGCTCTTGGTATGCAGGGCTAACAGAGAGTTGCTCAGGATGCTTCACATCAATCGCCAATGTTTTCTCAATGATTGGATCAGTTGGTCCTCCTGTGACGACAATCGAGGCACGGTTAGAATCCATTCCAGAAATGGGGTATGACGCACTCTCAAATGTGCCTAGGGGTGAGATCTGCTTGAGGGGTCACACCTTGTTCTCCGGGTACTACAAGCGCCCTGACCTCACCGAGGAAGTATTCTCAGATGGTTGGTTCCATACAGGTAAAGTCATTTACCCTCAGTTTCACGCCTTACTGAATGATCTGAAAGTGGAGATAAATTGTCTCAAATAAGCAATCATCTTATGTATGAAGGTGATATCGGTGAGTGGCAACCAGACGGCACGATGAAGATCATCGACAGAAAGAAGAACATTTTCAAGCTGTCCCAAGGGGAGTATGTAGCAGTGGAGGTCCTGGAAAGCGCATACGTGCAGTCTCCTCTCGTTACATCAGTATGACAACTGAAACAAAAACTAAGTCAAAGTAGTAACACATTTTTTTTGAGGTTCAACTTACCAAGAATCATCTTTGAATCAGGTTTGGGTCTATGGAAACAGCTTTGAGTCCTTCCTTGTTGCTGTGGTTGTCCCTGAGAAGCAGGCCATTGAGGATTGGGCTGCACAAAACAACAAGACTGGTAACTTTGCAGAATTGTGCAACGATCCGAAGGCAAGAATGTACATAGAGGATGAGCTAAACAAAACTGGCAAAAGACTAGGGGTATGCCGATAACCGTCATGGAAATTATTATTTAAGTTAACTTCTATTCATGATTAATGACAATTCATAAGACATTATTCTTGTGCCATGCAGTTGAGAGGATTTGAGATGCTAAAGGCAATTCACCTAGAGACAACGCCATTCAGCATAGAGAAGGACCTGGTGACTCCAACTTTTAAGCTCAAGAGACCCCAGCTGCTCAAATATTACAAGGTTAGAGAGAACAAACTCTATAACCATGATTTCCTGGTTTTGTTCTTATGATTTATTTTACGGATGCAAACATGTGAATGAAGTTCTTCATGACATTATTCTGGTGATCTTTATAAGACTAAGCATGTGGATAATGGTAGCACATTTTTTTAATGCAGGATTGCATTGATCAGCTGTACAAGGATGCCAAGGTGGGAAATAAACAGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA035446

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA035446&oldid=37422"