BGIOSGA035456

From RiceWiki
Revision as of 09:08, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA035456| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA035456, complete gene.| tag = OS11G05...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA035456

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA035456, complete gene.

LocusTag

OS11G0565000

Ensembl Transcript ID

BGIOSGA035456-TA

Ensembl Protein ID

BGIOSGA035456-PA

Length

2871

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:17832605..17835475

Sequence Coding Region

17832605..17834416,17835362..17835475

Genome Context

<gbrowseImage1> name=IndicaChromosome11:17832605..17835475 source=RiceIndica11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome11:17832605..17835475 source=RiceIndica11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAGTACGGCCATTATCATCGTCTCCACCACCACCTCCTCCTCCTTCTTCTTCTTCCTCCTCCTCATGATCACTACCGGCGGCGGCTGCAAACCGCGGGAGAGAGACGCTCTGCTGGCGTTCAAGGAAGGCATCGTCAAGGATCCTGCAGGCCTCCTCTCCTCCTGGCAAAGAGGAGGCCACTATGATGATGATGATGATCAGCTGCTGGAAGAGGATTGTTGCCAATGGAGAGGCGTCCGGTGCAGCAACCTCACCGGCCATGTCGTCAAGCTCAACCTCCGAAACGATTACGCCGACGTTGGAACAGGTCTGGTTGGCGAGATAGGCCATTCTCTGATCTCGCTGGAGCATCTCAGGTACCTTGATCTCAGCATGAACAACCTGGCAGGTCCAACTGGACATGTCCCTGAGTTCTTGGGCTCTTTCAGAAGCTTGAGATATCTGAATCTATCTGGTATAGTGTTCTCCGGCATGGTGCCACCTCAGCTCGGTAAGCTTTCAAATCTGAAATTTCTCGACTTCTCCGGGATGTTGCCCTCCAGCATGGCTCCATTTCTGTACATTAGTGATGCTTCATGGTTAGCACACTTGTCCAATTTGCAATATCTGAACCTTAACGGGGTAAACCTTAGCACAGTACTCGATTGGCCTCATGTTCTGAATATGATCCCTTCTCTGAAGTTCCTTAGCCTTTCTTCTTGCTCACTTCAGAGTGCAAATCAGTATCCCACACAGATTAACCTCAGGCAACTTGAGATACTTGATCTTTCCAACAATTATGAACTTAGTGACCAAGCTGAATCTAGTTGGATTTGGAGCTTGACATCCCTCAAGTATCTCAATCTTAGTTCGACTAGTTTGTATGGTGAGATCCCACAAGCACTAGGAAACATGCTGTCCCTCCAAGTTCTTGATTTCTCGTACAACGGCGAGGAGGATAGCACGGGCATGAGTGTTTCGAAGAAAGGTAACATGTGCATCATGAAGGCAAACTTGAAGAATCTGTGCAATTTGGAAGTTCTTGACCTTGATTATAGACTGGCATATGGAGAGATTTCAGAAATATTTGAGAGTTTACCACAGTGTTCACCCAACAAACTGAAGGAACTTCATTTGGCTAATAACAATTTGACCGGGAATTTACCAAAATTGGTAGGGAGGCTAACAAGCTTAGTCACTCTTGACCTCTTTAATAATAACATCACTGGACAAGTGCCTTCTGAGATAGGTATGCTCACAAATTTGACAAACTTGTACCTCCATTACAATTGCCTGGATGGTGTCATCACAGAGGAGCACTTTGCCAATCTAACGAGCTTGAAGTCGATATATTTGTGTTATAATTACTTGGAGATTGTAGTGGATCCTGAATGGTTACCTCCCTTCAGATTAGAGAAGGCATACTTTGCATCTACTTCGATGGGTCCCTCATTTCCCTCATGGCTTCAATCACAAGTCGATATTCTTGAACTTGCTATGAGCGATGCTGGAATAAATGATACATTTCCAGACTGGTTCTCTACAACATTTTCGAAGGCCACGTTTTTGGAGATGTCGCAGAATCAAATTGCTGGAGGCTTGCCAACAAATATGGAAAACATGTCATTGGAAAAATTATATTTGGACTGCAACCACATAGCTGATCGAATTCCTCGGATGCCGAGAAACCTTATGCTACTAGATATATCATATAACCTTATCAGTGGTGATGTTCCACAGTCTATTTGTGAATTGCAGAAATTAAATGGCCTTGACTTGTCCAATAATCTACTCGAGGGCGAGTTCCCTCAATGTTCTCTAATGAGCAGGGTTTATGTGAAGGTGATTGTTGTCTGGGCAAAGTTGACAGGAAGAACAGATGAAAGATTGCGAATGTCGCAGGTCGCATGGTCATCCATCGACTCTGACGAATACTATGAATAG</cdnaseq>

Protein Sequence

<aaseq>MSTAIIIVSTTTSSSFFFFLLLMITTGGGCKPRERDALLAFKEGIVKDPAGLLSSWQRGGHYDDDDDQLLEEDCCQWRGVRCSNLTGHVVKLNLRNDYADVGTGLVGEIGHSLISLEHLRYLDLSMNNLAGPTGHVPEFLGSFRSLRYLNLSGIVFSGMVPPQLGKLSNLKFLDFSGMLPSSMAPFLYISDASWLAHLSNLQYLNLNGVNLSTVLDWPHVLNMIPSLKFLSLSSCSLQSANQYPTQINLRQLEILDLSNNYELSDQAESSWIWSLTSLKYLNLSSTSLYGEIPQALGNMLSLQVLDFSYNGEEDSTGMSVSKKGNMCIMKANLKNLCNLEVLDLDYRLAYGEISEIFESLPQCSPNKLKELHLANNNLTGNLPKLVGRLTSLVTLDLFNNNITGQVPSEIGMLTNLTNLYLHYNCLDGVITEEHFANLTSLKSIYLCYNYLEIVVDPEWLPPFRLEKAYFASTSMGPSFPSWLQSQVDILELAMSDAGINDTFPDWFSTTFSKATFLEMSQNQIAGGLPTNMENMSLEKLYLDCNHIADRIPRMPRNLMLLDISYNLISGDVPQSICELQKLNGLDLSNNLLEGEFPQCSLMSRVYVKVIVVWAKLTGRTDERLRMSQVAWSSIDSDEYYE</aaseq>

Gene Sequence

<dnaseqindica>1..1812#2758..2871#ATGAGTACGGCCATTATCATCGTCTCCACCACCACCTCCTCCTCCTTCTTCTTCTTCCTCCTCCTCATGATCACTACCGGCGGCGGCTGCAAACCGCGGGAGAGAGACGCTCTGCTGGCGTTCAAGGAAGGCATCGTCAAGGATCCTGCAGGCCTCCTCTCCTCCTGGCAAAGAGGAGGCCACTATGATGATGATGATGATCAGCTGCTGGAAGAGGATTGTTGCCAATGGAGAGGCGTCCGGTGCAGCAACCTCACCGGCCATGTCGTCAAGCTCAACCTCCGAAACGATTACGCCGACGTTGGAACAGGTCTGGTTGGCGAGATAGGCCATTCTCTGATCTCGCTGGAGCATCTCAGGTACCTTGATCTCAGCATGAACAACCTGGCAGGTCCAACTGGACATGTCCCTGAGTTCTTGGGCTCTTTCAGAAGCTTGAGATATCTGAATCTATCTGGTATAGTGTTCTCCGGCATGGTGCCACCTCAGCTCGGTAAGCTTTCAAATCTGAAATTTCTCGACTTCTCCGGGATGTTGCCCTCCAGCATGGCTCCATTTCTGTACATTAGTGATGCTTCATGGTTAGCACACTTGTCCAATTTGCAATATCTGAACCTTAACGGGGTAAACCTTAGCACAGTACTCGATTGGCCTCATGTTCTGAATATGATCCCTTCTCTGAAGTTCCTTAGCCTTTCTTCTTGCTCACTTCAGAGTGCAAATCAGTATCCCACACAGATTAACCTCAGGCAACTTGAGATACTTGATCTTTCCAACAATTATGAACTTAGTGACCAAGCTGAATCTAGTTGGATTTGGAGCTTGACATCCCTCAAGTATCTCAATCTTAGTTCGACTAGTTTGTATGGTGAGATCCCACAAGCACTAGGAAACATGCTGTCCCTCCAAGTTCTTGATTTCTCGTACAACGGCGAGGAGGATAGCACGGGCATGAGTGTTTCGAAGAAAGGTAACATGTGCATCATGAAGGCAAACTTGAAGAATCTGTGCAATTTGGAAGTTCTTGACCTTGATTATAGACTGGCATATGGAGAGATTTCAGAAATATTTGAGAGTTTACCACAGTGTTCACCCAACAAACTGAAGGAACTTCATTTGGCTAATAACAATTTGACCGGGAATTTACCAAAATTGGTAGGGAGGCTAACAAGCTTAGTCACTCTTGACCTCTTTAATAATAACATCACTGGACAAGTGCCTTCTGAGATAGGTATGCTCACAAATTTGACAAACTTGTACCTCCATTACAATTGCCTGGATGGTGTCATCACAGAGGAGCACTTTGCCAATCTAACGAGCTTGAAGTCGATATATTTGTGTTATAATTACTTGGAGATTGTAGTGGATCCTGAATGGTTACCTCCCTTCAGATTAGAGAAGGCATACTTTGCATCTACTTCGATGGGTCCCTCATTTCCCTCATGGCTTCAATCACAAGTCGATATTCTTGAACTTGCTATGAGCGATGCTGGAATAAATGATACATTTCCAGACTGGTTCTCTACAACATTTTCGAAGGCCACGTTTTTGGAGATGTCGCAGAATCAAATTGCTGGAGGCTTGCCAACAAATATGGAAAACATGTCATTGGAAAAATTATATTTGGACTGCAACCACATAGCTGATCGAATTCCTCGGATGCCGAGAAACCTTATGCTACTAGATATATCATATAACCTTATCAGTGGTGATGTTCCACAGTCTATTTGTGAATTGCAGAAATTAAATGGCCTTGACTTGTCCAATAATCTACTCGAGGGCGAGTTCCCTCAATGTTCTCTAATGAGCAGGGTATCATTTTTTCGTGCAAGTAACAATAGTTTTTCTGGCAACTTCCCATCTTTTTTACAGGGTTGGACAGAGTTAAGTTTCCTTGATCTGTCATGGAATAAATTCTCTGGGACTTTGCCTACATGGATTGGAAACTTTAACAAGCTAGAATTTCTGCAGCTTAAGCACAATATGTTCTCTGGAAGTATTCCTGACAGCATCACCAACCTTGGAAAGCTTTCTCATTTGGATCTAGCCAGCAATGGTTTATCAGGTCCCCTGCCTCAGCATTTGTCAAATTTAACAGGAATGATGATAAACCATGATACCACAAAATATGAAGAGAGACTATCTGGATGTGACTACAAATCTTTTGTGAACATGAAGGGACAGGAACTACAATACAACCAAGAAAAAGTAACAGTTGTGACAATTGACTTGTCTTCAAATTTTTTGACTGGTGTAATTCCTGAAGGCATAGTTTCTCTTGACGGAATTATAAATTTGAATTTGTCATGGAACAATTTGAATGCAAAAATTCCATACATGATTGGGGCCATCAAGTCATTGGAATCACTCGACCTCTCGAAGAACAATTTCTATGGTGAAATCCCACAAAGCCTATCTGATTTAACATATTTAAGTTATTTGAACCTATCTTATAACAATCTTACTGGAAGAGTACCATCAGGGACACAACTTTGTAGCCTCTATGACCAAAACCATCATCTGTATGACGGCAATGATGGTCTTTGTGGGCCACCTCTCCAAAAAAGTTGTTATAAGTATGATGCCTCAAAGCAAGGTTACCAGATCAGAAGCAAACAAGGTTTTCACATAGGGTCATTTTCCATTGGAGTTACAGTGGGATTTATGGCAGGCCTATGGGTGGTTTTCTATATTCTTTTGTTCAAGAAATCCTGGAGGATTGCTTACTTTTGCTTCTTGGACAATATGTATGATGAGGTTTATGTGAAGGTGATTGTTGTCTGGGCAAAGTTGACAGGAAGAACAGATGAAAGATTGCGAATGTCGCAGGTCGCATGGTCATCCATCGACTCTGACGAATACTATGAATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA035456