BGIOSGA035476

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Gene Name

BGIOSGA035476

Description

Putative carotenoid isomerase ZEBRA2

Definition

Oryza sativa Indica Group BGIOSGA035476, complete gene.

LocusTag

'

Ensembl Transcript ID

BGIOSGA035476-TA

Ensembl Protein ID

BGIOSGA035476-PA

Length

3658

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:18229741..18233398

Sequence Coding Region

18229741..18230232,18230627..18230833,18230959..18231058,18231269..18231351,18231446..18231502
,18231580..18231732,18231806..18231884,18232069..18232217,18232329..18232463
,18232571..18232684,18232847..18232957,18233047..18233155,18233325..18233398

Genome Context

<gbrowseImage1> name=IndicaChromosome11:18229741..18233398 source=RiceIndica11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome11:18229741..18233398 source=RiceIndica11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCGCTCCTCCTCCTCGCCGCCGCGCGCCCGTGCGCCCCGCTCCTCGCTCCCTCCGCCGCCGGAGCAGTAGTAGGCCGGCCGTCCACCGCCCGCCCACTGGGACGAGGGACCAGGAGTGGCGCGGGCGCGGCGGCGGCTGTGGCGGCGGAGAAGACGGTGGTGAAGGCGGCGGAGGAGGAGGAGGAGGGTGGGGGTGGGGGAGAGTACGACGCGATCGTGGTGGGGTCGGGGATCGGGGGGATGGTGGCGGCGACGCAGCTGGCGGCGAAGGGGGCGAGGGTGCTGGTGCTGGAGAAGTACGTCATCCCCGGGGGGAGCTCCGGGTACTACCGCCGCGACGGGTTCACCTTCGACGTCGGCTCCTCCGTCATGTTCGGCTTCTCCGACAAGGTGAGGACAGTGACTGAGCACAGTTGGGTGTGGATGAGAATTGGGATGGTTGCGTTGCTGCTAGTATATTCTGGGGATCTTGCGTTGGCGAATTTGGTTGGGAACTTGAATTTGATTACACAAGCACTAGAAGCAGTTGGGCATAAGATGGAAGTTATACCGGACCCTTCTACGGTCCATTTCCACCTACCTGGTGACCTCTCAGTTCTTGTGCATAGAGAGTATGACGACTTCGTCACGGAGCTGGTTAACAAATTTCCTCATGAAAAGGAAGGAATCCTGAAATTCTATGGCACATGTTGGAAGATCTTCAATTCATTAAATTCTTTGGAGCTGAAGTCCCTTGAGGAGCCTCTATATCTTTTTGGGCAATTTTTTCAAAAGCCTCTGGAATGTTTGACGCTAGCTTATTATCTGCCACAGAATGCTGGGGATATTGCTCGCAAGTTCATAAAAGATCAGCAGTTACTCTCCTTCATAGATGCTGAGTGCTTTATTGTGAGCACAGTCAATGCCTTGCAAACACCCATGATTAATGCAAGCATGGTCTTGTGCGATAGGCACTTCGGGGGAATTAACTATCCAGTTGGTGGTGTTGGTGGTATTGCTATGTCCTTGGCAGATGGCCTTGTTGACAAAGGCAGTGAAATACGCTACAAGGCTAATGTGACCAATGTAATTTTAGAAAATGGCAAAGCTGTTGGAGTCAGGTTATCAAATGGGAAGGAGTTATTTGCTAAAACAGTGATATCGAATGCTACCAGATGGGATACGTTTGGTAAACTCTTGAAAGTTGAAGAGCTTCCAGAAGAGGAGAAAAACTTCCAAAAGAATTATGTTAAAGCACCATCATTCCTTTCCATTCATATGGGTGTCAAAGCCTCAGTTTTGCCTGCTGATACTGATTGCCACCATTTTGTGCTTGAGGATGACTGGGCTAATTTGGAGAAGCCTTATGGAAGCATATTTTTAAGTATCCCTACAGTGCTGGACCCATCCTTGGCTCCCGAAGGACACCATATACTTCATATTTTTACAACTGCAGGGATAGAGGATTGGGAAGGTCTGTCTAGGAAGGATTATGAGAAGAAAAAGGAGCTTGTGGCGACAGAGATAATAAAAAGGCTTGAAAATAAGCTGTTCCCTGGTCTTCAGGATTCAATAGTCCTCAAGGAGGTAGGCTCACCAAAAACACACCGAAGATTTCTTGCGCGAAATGATGGTACTTATGGACCCATGCCACGGGGTAAACCAAAGGGGTTGCTTGCAATGCCTTTCAATACTACTTCAATAGATGGCTTGTACTGTGTTGGCGACAGCTGTTTTCCTGGGCAAGGTGTAATTGCTGTGGCATTTTCAGGGATCATGTGTGCTCATCGAGTTGCAGCTGATATTGGACTGGAACAAAGATCTCCTGTACTAGATGCCGGTCTTCTTGGGCTCCTCAGATGGTTGAGAACGCTTGCATAG</cdnaseq>

Protein Sequence

<aaseq>MPLLLLAAARPCAPLLAPSAAGAVVGRPSTARPLGRGTRSGAGAAAAVAAEKTVVKAAEEEEEGGGGGEYDAIVVGSGIGGMVAATQLAAKGARVLVLEKYVIPGGSSGYYRRDGFTFDVGSSVMFGFSDKVRTVTEHSWVWMRIGMVALLLVYSGDLALANLVGNLNLITQALEAVGHKMEVIPDPSTVHFHLPGDLSVLVHREYDDFVTELVNKFPHEKEGILKFYGTCWKIFNSLNSLELKSLEEPLYLFGQFFQKPLECLTLAYYLPQNAGDIARKFIKDQQLLSFIDAECFIVSTVNALQTPMINASMVLCDRHFGGINYPVGGVGGIAMSLADGLVDKGSEIRYKANVTNVILENGKAVGVRLSNGKELFAKTVISNATRWDTFGKLLKVEELPEEEKNFQKNYVKAPSFLSIHMGVKASVLPADTDCHHFVLEDDWANLEKPYGSIFLSIPTVLDPSLAPEGHHILHIFTTAGIEDWEGLSRKDYEKKKELVATEIIKRLENKLFPGLQDSIVLKEVGSPKTHRRFLARNDGTYGPMPRGKPKGLLAMPFNTTSIDGLYCVGDSCFPGQGVIAVAFSGIMCAHRVAADIGLEQRSPVLDAGLLGLLRWLRTLA</aaseq>

Gene Sequence

<dnaseqindica>1..492#887..1093#1219..1318#1529..1611#1706..1762#1840..1992#2066..2144#2329..2477#2589..2723#2831..2944#3107..3217#3307..3415#3585..3658#ATGCCGCTCCTCCTCCTCGCCGCCGCGCGCCCGTGCGCCCCGCTCCTCGCTCCCTCCGCCGCCGGAGCAGTAGTAGGCCGGCCGTCCACCGCCCGCCCACTGGGACGAGGGACCAGGAGTGGCGCGGGCGCGGCGGCGGCTGTGGCGGCGGAGAAGACGGTGGTGAAGGCGGCGGAGGAGGAGGAGGAGGGTGGGGGTGGGGGAGAGTACGACGCGATCGTGGTGGGGTCGGGGATCGGGGGGATGGTGGCGGCGACGCAGCTGGCGGCGAAGGGGGCGAGGGTGCTGGTGCTGGAGAAGTACGTCATCCCCGGGGGGAGCTCCGGGTACTACCGCCGCGACGGGTTCACCTTCGACGTCGGCTCCTCCGTCATGTTCGGCTTCTCCGACAAGGTGAGGACAGTGACTGAGCACAGTTGGGTGTGGATGAGAATTGGGATGGTTGCGTTGCTGCTAGTATATTCTGGGGATCTTGCGTTGGCGAATTTGGTTGTGAGTGAGCGATTGATTGCTGGGAGCACTATGTGAAGTGCGGTGTCGAGGACGGCGAGAATTGGGGAAGGGAAAGTTAGGATTGATTTGGTTGTTGTTGGCTAGATGATGAGAAAATTATTGCTTTTCATGTGCATTTATGCCTCGTAATGCCCTGATAGGTACTTTACCTGATTGGAGTGGAATGTCGCGTTGATGGCGAAAATCGCAGCTATAGGTGTCCAACTTAGGAATATAGGTTGGCACTTGGCAGTGGGCATGCCTGGGTGAATGGGTGTGCAATGTTGCTGTTGCTGAGAGTATTGGCATGTGTGGGTGGGACTAGTGGCCGATAATATTTGTTTGTCTCTGAGTGTTGATTTTATCGTAAATATGACTTGTTTCTGTGATCCAGGGGAACTTGAATTTGATTACACAAGCACTAGAAGCAGTTGGGCATAAGATGGAAGTTATACCGGACCCTTCTACGGTCCATTTCCACCTACCTGGTGACCTCTCAGTTCTTGTGCATAGAGAGTATGACGACTTCGTCACGGAGCTGGTTAACAAATTTCCTCATGAAAAGGAAGGAATCCTGAAATTCTATGGCACATGTTGGAAGGTACTGTGGTACCATTTTCATTCTCCACTCTTATCTACAACTACTACTTTTTTTTCTTTTTGGTATTTTGAATTCACTCTTTGCAAGCATATATCAAGTACAGTTGTTTTCTCATATATGAGCAGATCTTCAATTCATTAAATTCTTTGGAGCTGAAGTCCCTTGAGGAGCCTCTATATCTTTTTGGGCAATTTTTTCAAAAGCCTCTGGAATGTTTGACGCTAGGTATAAGAACTACATCCATATATTCCTCTACAATATTTTGTAGCTGACCCATTGTATTCCCTATGGGCAAACTACAGCTGAATCAAATGCAATCCCAAAAACCAATGAAAGGATGATTGAGAGGAGAACTTGATCAGTACATCATATTTACTGTTTAATCAGATTGGTTGACTTGATACAGTGGAACTCATGACTTTATCTCTCTTGCAGCTTATTATCTGCCACAGAATGCTGGGGATATTGCTCGCAAGTTCATAAAAGATCAGCAGTTACTCTCCTTCATAGATGCTGAGGTGTGAGATATTTGTGAGTTTACTCACTTGTTCAATTTTTCTTCGCCGACCATGCGATTTTCTGTTAACACCAGTTTATTCACTTTGTTTGTAGTGCTTTATTGTGAGCACAGTCAATGCCTTGCAAACACCCATGATTAATGCAAGCATGGTAAGTGGAATGCATGACTCTCAGAATTTTGCTTCTGATTCATTTAAATTTCTGTTATCTCAAGGGTGAAATAACAGGTCTTGTGCGATAGGCACTTCGGGGGAATTAACTATCCAGTTGGTGGTGTTGGTGGTATTGCTATGTCCTTGGCAGATGGCCTTGTTGACAAAGGCAGTGAAATACGCTACAAGGCTAATGTGACCAATGTAATTTTAGAAAATGGCAAAGCTGTAAGTTCATCTTACTTAGACTAAATATCTGGAACTTTTATCGACTTGTTAGCTGAGCATTTCATTACTATAGGTTGGAGTCAGGTTATCAAATGGGAAGGAGTTATTTGCTAAAACAGTGATATCGAATGCTACCAGATGGGATACGTTTGGTAATCCTGCTTATCTATTTTTATTTGAAAATGATGCGGCTCATTGAAATTCATTTGTTACAATATTCTTTGCTGAAAGTTTCACAACCTTTGCTCAAAATTCACAACTCAGTTTTGTTCTTGAGTTATTATTTGTTAACTACTTGTACTTGTCCATAAAAATAACAATTACTTCTACTCAAAGGTAAACTCTTGAAAGTTGAAGAGCTTCCAGAAGAGGAGAAAAACTTCCAAAAGAATTATGTTAAAGCACCATCATTCCTTTCCATTCATATGGGTGTCAAAGCCTCAGTTTTGCCTGCTGATACTGATTGCCACCATTTTGTGCTTGAGGTAGGTATGACTCCACTGTGGGTATCAGATATCGCAGGCAGTTGGTACACAATGTTAAATTGATATGAACAGTTTAATCCATAATAACTTAATTCTAATTACAATTGCCAGGATGACTGGGCTAATTTGGAGAAGCCTTATGGAAGCATATTTTTAAGTATCCCTACAGTGCTGGACCCATCCTTGGCTCCCGAAGGACACCATATACTTCATATTTTTACAACTGCAGGGATAGAGGATTGGGAAGTATGGACTGTGCTTTTGCTGTAGTCTAATTTATTTCAAATTGTGAGAAACTAAGCCTTTTGTACCAATGTACTTATTTAGTTATTTATTCCTAATATCCACCACAGGGTCTGTCTAGGAAGGATTATGAGAAGAAAAAGGAGCTTGTGGCGACAGAGATAATAAAAAGGCTTGAAAATAAGCTGTTCCCTGGTCTTCAGGATTCAATAGTCCTCAAGGAGGTATTTATAGTTCTTCCACGTCAGGATCTAAGACTGTTCTTTTCACTATGACTAATTTTTGTTTGACCTTTAAATGCTGCTATCATGCAAAAAACTGTAGTGGGGTAGTTTTGATTCTAGTGCTAATACGCTTTCGACTTGTTGAACATTTGGTGTTGTCAGGTAGGCTCACCAAAAACACACCGAAGATTTCTTGCGCGAAATGATGGTACTTATGGACCCATGCCACGGGGTAAACCAAAGGGGTTGCTTGCAATGCCTTTCAATACTACTGTAAGTTAATATGCATTGTTGACTTGATGTCCTGAAATCTTCTTGTGCTGCAATATTGTTGGACTGAAAATTTACTGCTTATTTTACAGTCAATAGATGGCTTGTACTGTGTTGGCGACAGCTGTTTTCCTGGGCAAGGTGTAATTGCTGTGGCATTTTCAGGGATCATGTGTGCTCATCGAGTTGCAGCTGATATTGGTAAGTTCAGGTTCCACTAACATCCCCCCTAAAATGAACTGAGTTTGAAGGATTGGAAGCTTTATTTATGTTAGGGACTAAGAAGTAGAGAGATTTGTCTGCTGATGAACAACATAAGCTGATATTGGCAGAAAAATGACGTTTGTTTGCTGCTTTGATCCTCATCCAGGACTGGAACAAAGATCTCCTGTACTAGATGCCGGTCTTCTTGGGCTCCTCAGATGGTTGAGAACGCTTGCATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA035476

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA035476&oldid=37452"