BGIOSGA035519

From RiceWiki
Revision as of 09:09, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA035519| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA035519, complete gene.| tag = OS11G05...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA035519

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA035519, complete gene.

LocusTag

OS11G0585900

Ensembl Transcript ID

BGIOSGA035519-TA

Ensembl Protein ID

BGIOSGA035519-PA

Length

4323

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:18793847..18798169

Sequence Coding Region

18793847..18793974,18794198..18795907,18796191..18796482,18797269..18797578,18797949..18798169

Genome Context

<gbrowseImage1> name=IndicaChromosome11:18793847..18798169 source=RiceIndica11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome11:18793847..18798169 source=RiceIndica11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAGGAAGCTCTTCTTCTCCGAGTTGACCTCCTGCAAGGAGACCAAGCTCCACTCCGCGCCCCACTCATGGCTTCCCCTCGAGAAAGGGAAGCTCTCCAAGTTCGCCGGCCACTCCACCTCCTCCATAGAATCGCTGATGAAAATGCCGGAGCCGGCGGTTCTTCCCCACTTCAAGCCTGCGGATTATGTGGACATATTGGCCCAGATTCATGAGGAGCTGGAGTCTTGCCCTCCTGATGAGAAGTCGTGCCTGTACCTGCTCCAGTTCCAGGTTTTCCGCGGCCTCGGCGAGGCGAAGCTGTCGCGGAGGAGCCTCCAGTCCGCGTGGGAGAAGGCGAGCACGATACACGAGAAGCTGATATTCGGGGCATGGCTCAAGTATGAGAAGAAAGGGGAGGAGCCGATATCCGACCTCCTCAGCTCGTGCGGCAAGTGCTCTCAGGAGTTCAAGCTGCTGGATTTCGTGTCGCAGATCTCCACCGGGTCGCATGAGATAAGCTATGATGATGAGTCGGATGTGTTTTGGGGCTCTCCGGTGGTACATTTCCAGATAAGAGATGATATGATTGCATGCGATCGGCGAAAGCTTGCTGCTTTGTCGACTCCGCTGTATGCAATGCTTAACGGTGGTTTTCGGGAATCACATCTTGAGGTTATTGATATGTCTCGGAATGGCATCTCCTCGATTGGTATGCGAGCAATCAGTAAATTCAGCTTGACAGGAAGGTTACCGTATTTATCAGCAGATGCTATTTTGGAAATGCTTGATTTTGCTAATAAGTTTTGCTGCAATGGCCTCAAGGATGCTTGTGAGCGAAAGCTTGGTTCTTTCATTTGCTCGAGGCAGGATGCTATAGACTTCATGGAGTGTGCTCTTGAGCTGGGTTGTTCCATCCTTGCTGCTGCATGCTTGCAGGTGCTCCTGAATGAGCTTCCAGAGTGCTTGAATGATGAACAAGTGGTTAGGATATTCTCCTGTGCAAGTAAGCAGCAGCGATCCACAATGGCTGGAAATGCTTCTTTCTCCCTATATTGCCTTCTTAGTGAAGTCTCCATGAGCATCAACGCGACATCGGATGTCACGGTGACCTTCTTGGAAAAATTGGTGGATTCAGCATCAGATTCTAGACAGAAGCAGTTGGCCTTGCATCAGCTGGCGTGCACAAGACTTCTAAGGAAAGATTATGCTGAAGCCGAGCGCCTGTTCAATGCCGCCTTTACCGCTGGACATCTCTATTCAGTAGTGGGTTTGGCTAGACTGGCCTCTATGAGGGGTAATAAGCATTTTTCTCTCAAGTTGCTTGATTCTGTCATGTCATCTCGCTGGCCACTTGGATGGATGTACCAAGAGAGAGCACTATATTTGGAGGGTGATAACAAGTTGGAAAATCTTAACAAGGCCACTGAGTTGGATCCTACCCTTACATACCCCTACATGTTTCGAGCTGCATCTTTGATGAAAAGACAAAGCGTTGAAGCTGCCCTTATGGAGATTAACCGGATCCTGGGATTTAAGCTTGTTCTGGAATGCTTAGAGCTAAGGTTCTGTTGCTATCTTGCACTTGAGGACCATAGAGCTGCTTTATGTGATGTCCAGGCAATCCTCACTCTTGCTCCAGATTATCGTATGATTGGTGGTCGGGTGTCTGCAAAGCAGCTGCGTATGCTTGTGATGGAGAATGTTGAGCAGTGGACAACTGCTGACTGTTGGATGCAGCTTTATGATCGTTGGTCATCTGTGGATGATATAGGATCCCTCTCGGTCATATATCAAATGCTGGAGTCAGATGCTGCTAAAGGAGTTCTCTACTTTAGGCAATCTTTGCTTCTTCTCAGATTAAATTGTCCTGAGGCTGCAATGCGCAGTTTGCAGCTAGCTCGTGAACATGCTGCAAGCCAACATGAACAGCTTGTTTATGAGGGATGGATATTGTATGATACCGGCCACTGTGAGGAGGGACTGCAGAAAGCAGAAGCATCCATCGCAATACAAAGATCATTTGAAGCATTCTTTCTGAAAGCTTATGCTTTGGCTGATTCGAGTCTTGACCCTTCAACTTCAGCAACAGTTGTATCACTTCTTGAAGATGCATTACGCTGCCCCTCTGATAGACTACGGAAGGGTCAGGCTCTGAACAACCTTGGGAGTGTTTATGTGGATTGCGGGAAGCTTGACCTGGCAGCTGAATGCTACATCAATGCCCTAAAGATTGGTCATACCAGAGCTCATCAAGGCCTTGCCAGGGTCCATTTCCTCAGAAACAGCAGAACTGGTGCATATGAGGAAATGACCAAGCTAATAGAGAAGGCCAGGAGCAACGCATCAGCTTATGAGAAGAGGTCGGAGTACTGTGATCGTGAGCTAACAAAATCAGACCTGCAGATGGTGACCAAACTAGACCCTCTGCGTGTATACCCCTACAGATACCGTGCTGCTGTGCTGATGGACAACCACAAAGAGAAGGAGGCCATCGCGGAGCTGACAAAGGCAATCGCCTTCAAGGCGGACCTGAACCTGCTCCACCTGCGAGCCGCCTTCCACGAGCACGTCGGCGACATCTCGAGTGCACTCCGGGACTGCCGCGCAGCGCTCTCCGTGGATCCTAACCACCAGGAGATGCTCGAGCTTCATCACCGGGTGAACAGCCAAGAACCCTGA</cdnaseq>

Protein Sequence

<aaseq>MRKLFFSELTSCKETKLHSAPHSWLPLEKGKLSKFAGHSTSSIESLMKMPEPAVLPHFKPADYVDILAQIHEELESCPPDEKSCLYLLQFQVFRGLGEAKLSRRSLQSAWEKASTIHEKLIFGAWLKYEKKGEEPISDLLSSCGKCSQEFKLLDFVSQISTGSHEISYDDESDVFWGSPVVHFQIRDDMIACDRRKLAALSTPLYAMLNGGFRESHLEVIDMSRNGISSIGMRAISKFSLTGRLPYLSADAILEMLDFANKFCCNGLKDACERKLGSFICSRQDAIDFMECALELGCSILAAACLQVLLNELPECLNDEQVVRIFSCASKQQRSTMAGNASFSLYCLLSEVSMSINATSDVTVTFLEKLVDSASDSRQKQLALHQLACTRLLRKDYAEAERLFNAAFTAGHLYSVVGLARLASMRGNKHFSLKLLDSVMSSRWPLGWMYQERALYLEGDNKLENLNKATELDPTLTYPYMFRAASLMKRQSVEAALMEINRILGFKLVLECLELRFCCYLALEDHRAALCDVQAILTLAPDYRMIGGRVSAKQLRMLVMENVEQWTTADCWMQLYDRWSSVDDIGSLSVIYQMLESDAAKGVLYFRQSLLLLRLNCPEAAMRSLQLAREHAASQHEQLVYEGWILYDTGHCEEGLQKAEASIAIQRSFEAFFLKAYALADSSLDPSTSATVVSLLEDALRCPSDRLRKGQALNNLGSVYVDCGKLDLAAECYINALKIGHTRAHQGLARVHFLRNSRTGAYEEMTKLIEKARSNASAYEKRSEYCDRELTKSDLQMVTKLDPLRVYPYRYRAAVLMDNHKEKEAIAELTKAIAFKADLNLLHLRAAFHEHVGDISSALRDCRAALSVDPNHQEMLELHHRVNSQEP</aaseq>

Gene Sequence

<dnaseqindica>1..128#352..2061#2345..2636#3423..3732#4103..4323#ATGAGGAAGCTCTTCTTCTCCGAGTTGACCTCCTGCAAGGAGACCAAGCTCCACTCCGCGCCCCACTCATGGCTTCCCCTCGAGAAAGGGAAGCTCTCCAAGTTCGCCGGCCACTCCACCTCCTCCATGTAAGTTCTCTCTCTCTCTTGCTGTTACATGATGCGTTTGGCTTGTTCTGAATCCTGCTACTTTAGTTAGTTACCTGGTCTTTGTTAGTAGTACTTTGTGTAGAGGGAGATTCACAAAATTCAGATTTTACTGGTATAGTTCTGAAGAGCTTTGCTGGCTGGTTGGTTGGTTGGTTGTGATGTTCATCAATTTGATTCTTGGTGGGTTGTGGTTGTGGTGCAGAGAATCGCTGATGAAAATGCCGGAGCCGGCGGTTCTTCCCCACTTCAAGCCTGCGGATTATGTGGACATATTGGCCCAGATTCATGAGGAGCTGGAGTCTTGCCCTCCTGATGAGAAGTCGTGCCTGTACCTGCTCCAGTTCCAGGTTTTCCGCGGCCTCGGCGAGGCGAAGCTGTCGCGGAGGAGCCTCCAGTCCGCGTGGGAGAAGGCGAGCACGATACACGAGAAGCTGATATTCGGGGCATGGCTCAAGTATGAGAAGAAAGGGGAGGAGCCGATATCCGACCTCCTCAGCTCGTGCGGCAAGTGCTCTCAGGAGTTCAAGCTGCTGGATTTCGTGTCGCAGATCTCCACCGGGTCGCATGAGATAAGCTATGATGATGAGTCGGATGTGTTTTGGGGCTCTCCGGTGGTACATTTCCAGATAAGAGATGATATGATTGCATGCGATCGGCGAAAGCTTGCTGCTTTGTCGACTCCGCTGTATGCAATGCTTAACGGTGGTTTTCGGGAATCACATCTTGAGGTTATTGATATGTCTCGGAATGGCATCTCCTCGATTGGTATGCGAGCAATCAGTAAATTCAGCTTGACAGGAAGGTTACCGTATTTATCAGCAGATGCTATTTTGGAAATGCTTGATTTTGCTAATAAGTTTTGCTGCAATGGCCTCAAGGATGCTTGTGAGCGAAAGCTTGGTTCTTTCATTTGCTCGAGGCAGGATGCTATAGACTTCATGGAGTGTGCTCTTGAGCTGGGTTGTTCCATCCTTGCTGCTGCATGCTTGCAGGTGCTCCTGAATGAGCTTCCAGAGTGCTTGAATGATGAACAAGTGGTTAGGATATTCTCCTGTGCAAGTAAGCAGCAGCGATCCACAATGGCTGGAAATGCTTCTTTCTCCCTATATTGCCTTCTTAGTGAAGTCTCCATGAGCATCAACGCGACATCGGATGTCACGGTGACCTTCTTGGAAAAATTGGTGGATTCAGCATCAGATTCTAGACAGAAGCAGTTGGCCTTGCATCAGCTGGCGTGCACAAGACTTCTAAGGAAAGATTATGCTGAAGCCGAGCGCCTGTTCAATGCCGCCTTTACCGCTGGACATCTCTATTCAGTAGTGGGTTTGGCTAGACTGGCCTCTATGAGGGGTAATAAGCATTTTTCTCTCAAGTTGCTTGATTCTGTCATGTCATCTCGCTGGCCACTTGGATGGATGTACCAAGAGAGAGCACTATATTTGGAGGGTGATAACAAGTTGGAAAATCTTAACAAGGCCACTGAGTTGGATCCTACCCTTACATACCCCTACATGTTTCGAGCTGCATCTTTGATGAAAAGACAAAGCGTTGAAGCTGCCCTTATGGAGATTAACCGGATCCTGGGATTTAAGCTTGTTCTGGAATGCTTAGAGCTAAGGTTCTGTTGCTATCTTGCACTTGAGGACCATAGAGCTGCTTTATGTGATGTCCAGGCAATCCTCACTCTTGCTCCAGATTATCGTATGATTGGTGGTCGGGTGTCTGCAAAGCAGCTGCGTATGCTTGTGATGGAGAATGTTGAGCAGTGGACAACTGCTGACTGTTGGATGCAGCTTTATGATCGTTGGTCATCTGTGGATGATATAGGATCCCTCTCGGTCATATATCAAATGCTGGAGTCAGATGCTGCTAAAGGAGTTCTCTACTTTAGGCAATCTTTGCTTCTTCTCAGGTAACTTAATTAACTTATTTTATTGCACAGAATAAGAGTTAGCATGATTAAAAAATGATACAGCACATCAATGATTAGCATTGTAGATGTATAGCACATGGTTTGCATTGCCTGGCATGTCTTACACCTTCTAGTTTGTGGATTCATTTGGAATGCCAAACTACCAGATGGTTTATCAGCATAGTTGCACATGCCTCCTGACCAACTTACATCATGGTCTAATTCTTGTGCTAGAATCTCAGGGATGTTGTGATTAATACTATTTTAACCTTTTTTTTTTCAGATTAAATTGTCCTGAGGCTGCAATGCGCAGTTTGCAGCTAGCTCGTGAACATGCTGCAAGCCAACATGAACAGCTTGTTTATGAGGGATGGATATTGTATGATACCGGCCACTGTGAGGAGGGACTGCAGAAAGCAGAAGCATCCATCGCAATACAAAGATCATTTGAAGCATTCTTTCTGAAAGCTTATGCTTTGGCTGATTCGAGTCTTGACCCTTCAACTTCAGCAACAGTTGTATCACTTCTTGAAGATGCATTACGCTGCCCCTCTGATAGACTACGGAAGGGTCAGGTATGGCTTTATGACTTCATTTTCTTCCACATCCTTTCATCAATTCTACTTAGCTAAACAGACCATGCATGATAACAAGTTGCTGTCCTGTTTCTGCTGTGACATAATGCAAATTCTGAGATCATATTTCTCATAACAAAAATAGGAATACTTTATACCCTTGTAGCACATTCGGAAGTAGTCAAACAAAGGTTTCAAATTGGGTTCTTGGTACATGAAGTGTAATTTTACCTTGTTATCTTTTAATACCTTCGTACTTGAGGCATAATGGCATAATATGCATTTGTTCATTTTCCAAATTCGTTGGTTGTTATTTAGATCAGGTGTTGTTGCTCCACCTATGTTAGGAAGTTAAGATGTCCTATTCATTATTGAATTATTAATGCAAATGGCGCTCTCACTATTAAAATTGGCTGTCCTGGTGCTCATAACATGCCAACCATCAATTCTTCTCATAGTTGCACTGCAAGCGTGATTTGATTTCCTATCAAGTATCTAACATGTTTCTAAGTTATGAGTTATGACATCTGATACCATTGATGCTACTGATAATTGCCAACCATATGGATGAGTGGACTGACTTAAATGAAACTTTGCTCTCTTTTTTTTCATCAGTTTAGCTAAATGGACCGACCAGCCACAATCAGTACTTTTTTCTATCAGCTTAAGCTGACAGTGTACATTTTATTTCTGTAACATTGGTTGACCCAATCTGCAGCATTGTATTTGATTTGAGATGTTCGCAAATGGTACATCTTATTCATCGTAATGTGTGACATCTTGTAGGCTCTGAACAACCTTGGGAGTGTTTATGTGGATTGCGGGAAGCTTGACCTGGCAGCTGAATGCTACATCAATGCCCTAAAGATTGGTCATACCAGAGCTCATCAAGGCCTTGCCAGGGTCCATTTCCTCAGAAACAGCAGAACTGGTGCATATGAGGAAATGACCAAGCTAATAGAGAAGGCCAGGAGCAACGCATCAGCTTATGAGAAGAGGTCGGAGTACTGTGATCGTGAGCTAACAAAATCAGACCTGCAGATGGTGACCAAACTAGACCCTCTGCGTGTATACCCCTACAGATACCGTGCTGCTGGTAAGCACCGCTTCCTGCCTAGCAAATCTTGTTTGTTATGATATAGGTATGACTGAGACAAGATTTGTCATGATAGCAAACCACCAGTTTCAAAGCAGGTTGAAACTTGGATATAAAATCGTGGTCACAGTAGTTTAATTTGTTAGTAGATGTAGCTCATCGGTGTCCAACTCCCAGAGGTTTGTGCTATTATAACTAACCAACTACTCCTTTTCCTATCATAAGCTGGTAAGAAGTCAATGTTGTTTGGCAATATTCTATGCTCAACTTGATCAGTTGGTGTAACAACCACATATTTCACTCAGTTCAAAAATTAGCTCATCTGTTTGATATTCTCATGCATCTTTTTTCGCTGATCTGGAATCCTCAGTGCTGATGGACAACCACAAAGAGAAGGAGGCCATCGCGGAGCTGACAAAGGCAATCGCCTTCAAGGCGGACCTGAACCTGCTCCACCTGCGAGCCGCCTTCCACGAGCACGTCGGCGACATCTCGAGTGCACTCCGGGACTGCCGCGCAGCGCTCTCCGTGGATCCTAACCACCAGGAGATGCTCGAGCTTCATCACCGGGTGAACAGCCAAGAACCCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA035519