BGIOSGA035544

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Revision as of 09:09, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA035544| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA035544, complete gene.| tag = OsI_366...")
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Gene Name

BGIOSGA035544

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA035544, complete gene.

LocusTag

OsI_36682

Ensembl Transcript ID

BGIOSGA035544-TA

Ensembl Protein ID

BGIOSGA035544-PA

Length

6923

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:19388029..19394951

Sequence Coding Region

19388029..19388814,19388917..19389042,19389127..19389231,19389333..19389467,19389606..19389655
,19391295..19391353,19391627..19391736,19391819..19392040,19392764..19392997
,19393101..19393200,19393522..19393652,19394657..19394713,19394829..19394951

Genome Context

<gbrowseImage1> name=IndicaChromosome11:19388029..19394951 source=RiceIndica11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome11:19388029..19394951 source=RiceIndica11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAGTGCTCTCACTGGTGCACTGGACTTTGTGAAGGACAATAGAGAATGGATCTGCTGGCTGTGCCCTCAATGCGAAATGACTTTCCTCACTGCGAAGACCTTCCAGTTGCATGTTGAGGATGATGAGTTCTCCCGGTCCCAGGAGTTCAAAGAATCGCTGTTGTTTGTGCCGGAGAGGATATCTGATGAACAGACAGAGTTTATTAAGTGTTGGACTCTGCCATCTGATGTCAATCCTACTGAAGAAGCTGAGGGAGAAAAGATCTTGACCAAGATCAAGAGTACATTTCAGTACCTCAAGGATAAGAAGGCTCTATCTGTTGATCTTTTTGACAACCTGATCAAATTCACGAAAAACCGGATTGAAGAAGCTGTTACCCAAAATTATAGCTGCATTACTTCTCTGGACCCTGGAGGGCTTCTGTTGCTGGGGACTTATCTGGATTTGCTTCGATTGAGGGTTGGTGATGCCGAGCAGGATAGCCGTGATAATTTTGGTGGGGGAGTTGTTCAAGACGCTTGCGTTCTATCTATAGGTACTGATGAGAATGTGCTAAGAATTACTGATGGTTCTAGCAATCAAGATGCTCTGTTTAGCTGGCTATCTAGACCTTCAAGACAAGACCCATTTACATCATGGGACAACATGAGGCAAGCCTGTCTAGATAAGGGAACTCATGCCCTTGGAAAGTTAAATGGAAGGGCCGCTGCATTGATAGAGAAAGTTAATCTGAAACGTGGCTTAACAGCGACGCAGACTTATGAAGCTTATTTTGGTGAAAAGGCTAAAATAGATATTGAGATCATGCAATTGGTTGCCGAAGTTGATAATTTGAAGAAAAACCTCTTGGAAGTCTGCACTTATGATTATCGTGAAATCATTTTACCAGCTATGAAAGATTTCCTATGGGCTAAACTGTGTAATGTTCCACCTAAAGGGGTCTCAAGTTCTGAGGGTGATAAAGTTTCTGAGGCAAGTATTGAAAACAGAGATCCAGTTCAAGAAGATATTAATGCAGGTCTCAATATCATCAGTCCTGAATCAGTCTTACAAGAAGATGATGGAAAAGCTACCGAGGACAATCTACAGGGTGGAGATTCAACTGTGCCCGACTGTAATGGTGTCGAAGAGCTTCCAGGCGATAGTAAAGTACTGCAATCTGGCAAGAAGCTTGAGTTGCCTCCAAGAGCTAACACAAGCACCTTGGGAAGCTCAGAGACTCCTATGGAAAAGGAAAACAAGACTTCCTCGCCATCTGATTACTCTGGCTCAAATGAAGGGAGTGCAAACATTTCGAGCAATGGAGTAACTGGAAGTGCCTATCCAAATAGTGAAAATGAACTAAAGTCCTTGTTTTCGGCTCTCCTGTCATTGTGGCACTTAAGGCCCTTCACTGATAAGTTCATGAAGAAAGCACCGCTTTATCCTCATTTTGGAGTTTCTGGAAAAGATCGGAATTGTATGCTGTGCTACTTGTTCCATAGTTTCAATGCTTTTAGTGATAAGAGTGACTCTACAGCAACTTATCGACTGAGCTGTTTGAGACCTTCTTTTATCAAGATTTTAGAAGAGGCGAATGTTTCGTTGAAGGAGGAAACAAATTTGGCAGTGAAATATATAGAAATAGTGCTTAACATGGTGCATACATCAGAAACTGCTAAATGTATCAGCAACAACAGTAAAAACATTCTGTACAAAACAACACTCTTCTCCAGTTGTCCTGATCATAGATGCCTCTCGCATGAACTTTTTGGGATGCACAAGAATGCAACAGAGAGCACATATTTTCTCAACGTTGGTGCAAGTGAACTGCGGAATATTGAGATGAACACTTTTGCCGATGTCATAAAATCTGTCGACAAGAAGTTTCACTGTAATACTGAGAGTAATGCTCACAATCATCCGCCACGTTACTTCACAACTGCTTTTGGCTATCCAAGTGAGAATGATAGCCATCTTGTCTCTGGATTACTGGTCAGCATAGCTGCCCCCTTGGACATTAATCCTGTTTATGAAGGCCTGCACTCAGAATGCAAGTATACTATGGTTTCTGCGGTATTTCGTGCTGAGGGGCGAGATATCTGCCTTGCTCGAGAAGAGGAGAAGTGGCTTGAATTTGATTCATGGGAGAAAGTGCTTGAAGAATACAGTCGTTCCAGTTTCTGTCCACAGATAATCTTCTTCGAGCGTATCGACCCAGTTTCAGAGGCCGCGGGCACAGAAGTCACAGTCTAG</cdnaseq>

Protein Sequence

<aaseq>MSALTGALDFVKDNREWICWLCPQCEMTFLTAKTFQLHVEDDEFSRSQEFKESLLFVPERISDEQTEFIKCWTLPSDVNPTEEAEGEKILTKIKSTFQYLKDKKALSVDLFDNLIKFTKNRIEEAVTQNYSCITSLDPGGLLLLGTYLDLLRLRVGDAEQDSRDNFGGGVVQDACVLSIGTDENVLRITDGSSNQDALFSWLSRPSRQDPFTSWDNMRQACLDKGTHALGKLNGRAAALIEKVNLKRGLTATQTYEAYFGEKAKIDIEIMQLVAEVDNLKKNLLEVCTYDYREIILPAMKDFLWAKLCNVPPKGVSSSEGDKVSEASIENRDPVQEDINAGLNIISPESVLQEDDGKATEDNLQGGDSTVPDCNGVEELPGDSKVLQSGKKLELPPRANTSTLGSSETPMEKENKTSSPSDYSGSNEGSANISSNGVTGSAYPNSENELKSLFSALLSLWHLRPFTDKFMKKAPLYPHFGVSGKDRNCMLCYLFHSFNAFSDKSDSTATYRLSCLRPSFIKILEEANVSLKEETNLAVKYIEIVLNMVHTSETAKCISNNSKNILYKTTLFSSCPDHRCLSHELFGMHKNATESTYFLNVGASELRNIEMNTFADVIKSVDKKFHCNTESNAHNHPPRYFTTAFGYPSENDSHLVSGLLVSIAAPLDINPVYEGLHSECKYTMVSAVFRAEGRDICLAREEEKWLEFDSWEKVLEEYSRSSFCPQIIFFERIDPVSEAAGTEVTV</aaseq>

Gene Sequence

<dnaseqindica>1..786#889..1014#1099..1203#1305..1439#1578..1627#3267..3325#3599..3708#3791..4012#4736..4969#5073..5172#5494..5624#6629..6685#6801..6923#ATGAGTGCTCTCACTGGTGCACTGGACTTTGTGAAGGACAATAGAGAATGGATCTGCTGGCTGTGCCCTCAATGCGAAATGACTTTCCTCACTGCGAAGACCTTCCAGTTGCATGTTGAGGATGATGAGTTCTCCCGGTCCCAGGAGTTCAAAGAATCGCTGTTGTTTGTGCCGGAGAGGATATCTGATGAACAGACAGAGTTTATTAAGTGTTGGACTCTGCCATCTGATGTCAATCCTACTGAAGAAGCTGAGGGAGAAAAGATCTTGACCAAGATCAAGAGTACATTTCAGTACCTCAAGGATAAGAAGGCTCTATCTGTTGATCTTTTTGACAACCTGATCAAATTCACGAAAAACCGGATTGAAGAAGCTGTTACCCAAAATTATAGCTGCATTACTTCTCTGGACCCTGGAGGGCTTCTGTTGCTGGGGACTTATCTGGATTTGCTTCGATTGAGGGTTGGTGATGCCGAGCAGGATAGCCGTGATAATTTTGGTGGGGGAGTTGTTCAAGACGCTTGCGTTCTATCTATAGGTACTGATGAGAATGTGCTAAGAATTACTGATGGTTCTAGCAATCAAGATGCTCTGTTTAGCTGGCTATCTAGACCTTCAAGACAAGACCCATTTACATCATGGGACAACATGAGGCAAGCCTGTCTAGATAAGGGAACTCATGCCCTTGGAAAGTTAAATGGAAGGGCCGCTGCATTGATAGAGAAAGTTAATCTGAAACGTGGCTTAACAGCGACGCAGACTTATGAAGCTTATTTTGGTGAAAAGGTTCCTTTTACTATATCCTGAATTTCTGTTTGCTCAATATCCTTTCAGATAGTGTTTGGACCTTCCTGACCAATCTTTTAAGCTTGGCTGTAAAATGTGCAGGCTAAAATAGATATTGAGATCATGCAATTGGTTGCCGAAGTTGATAATTTGAAGAAAAACCTCTTGGAAGTCTGCACTTATGATTATCGTGAAATCATTTTACCAGCTATGAAAGATTTCCTATGGGTTAGTCTAGTTCTTGTATGTTATTTGACTTTGATAAATAATACTACTTTGCTTATCATTGTTTTCATGGTTGCACTCATGCAGGCTAAACTGTGTAATGTTCCACCTAAAGGGGTCTCAAGTTCTGAGGGTGATAAAGTTTCTGAGGCAAGTATTGAAAACAGAGATCCAGTTCAAGAAGATATTAATGTAAGTTGTAACACGAACATGATGTTCTTTCTTTACTCTGAAGATATATCAGCTTTGATTAGTTTCACTTAATCATCTTTGCATGATTGTATGCTTAACAGGCAGGTCTCAATATCATCAGTCCTGAATCAGTCTTACAAGAAGATGATGGAAAAGCTACCGAGGACAATCTACAGGGTGGAGATTCAACTGTGCCCGACTGTAATGGTGTCGAAGAGCTTCCAGGCGATAGTAAAGTAATTAACGGTTCAATATTTTCTTACTTAAAAAAATAACAGTATCATCGTGCTTTAGCTTCTCATTCACTGCATGCACTGGCTTAGTTTCATTTTATGCTTTACAGTACTGAACAAAGAAAAATGTTCTGATTTTAGGTACTGCAATCTGGCAAGAAGCTTGAGTTGCCTCCAAGAGCTAACACAAGGTAAGCATGCTTATGTTGGGTGTAGCTTGCTTCCTTGAAATTGTTATTTGCTGGATTTCGCTCTTGTTTTAGACTATAGCTTTCTGGACTTGTTCCACTATATTATGTTCCCATTTTCCTATTTAATGTATTTTCTGTAAAGTTTATTGAGCTTTCTGTTATGCTTTTGACCCAGTGAGTATATCTCATATCACCATGATATATATATCCAATGATGTATATATCCATGTCTAAGGGTTATCTCAATATTTTTTTCTGAAAGAAAATCGGTAGTTCTGCCTTATCAATTAAGGGGGAGAAAGATAGGGACGACTACAGAGTTCAGTTTACAAGTTTTGCAAAGAAGAAAACCAACTAATACTAACTGTTAACAAACTACCCTAATTAAAAGGAACGGATGAGAAGGTTCTCTGGCACAAATCTGTTTGACACCAGCTGTTACAAACTACCCTAATTAAAAGGAACGGATAAGAAGGTTCTCTGGCTCAATCTGTTCGACAGTATTGCTATATATATCGAGTCTAGGTCCTGCTTGACAAACTTTGCATCTTTTGGATCGCTATATACAAAAAACTTAGGGCCTTCAGGAGTTCTTCTGCGCAGTCTCTCCTTTGCACGGGAGAAGATTCGAACGTGGGGGAGTCCAGCATAGATAGGGAACCTATCTTGATTTCCAGACAGCAAGAATCGTGAGCAAATCCCATATGTACCATGTGCAGCTGCCTGCATGGATCTGGTTATACCTAAAGGGAAGGAGTCCGATGGAAAGGGCATCGCTGCACCTAGCAAATTTATCTTGGTCATTTGTATATCAATTACTTGCTGATGATTGAATCCGACTGGAATACGTATAATTAATGGGGCTGTTCATCCAAACAGTACATTGATGGGCTACATTGAGTAAATAATGAATTCAGTCAGTTTTCCTACTTTGAGTCTGGGTTGCCCAAGTAGAGGCATGGTACAACTCAAAAGGGCTCAATACTTCTATACTATATAATAGGTACTCTTAGGTGCGTAGGAGCATATGCTTTGTAGTATTTGACAGATTACAGCCCAAATTTCAAAATTATATTTGAGAGGGATTTGCTTGGATTCTGAATGTTTTTTCAAAACAGACTTACAAGTTCTTGGCCAAAACTTGTGGAGAGTAACCTAATTTTACAATTGCAACCGTAATTTGTGCTTGAATCCAGGTGTTTTTGCTTACTGGTTTTTCATTCTGATGGTTTGGTTGGATGATATAGGAGCAAGTGGCATCGTTGTTTGTTTAATGTGTTTGTAGAATTTGCATCATTAGTTATCTTATTCCGATGGTTTAGGTAAATTTAGATTCCCCTGAATAAGTGCTAGGGATTAAAATATGATCCAGAAGGGTATTCCGAGTGTAACTTTTCGGCATCAACAATATTTTACTAGAGAAAATTTGAATGCCCTCCCTGTCTCCCTCTGGAATATTTAGTGCACCAAATGTCCACACTGTTAGATTAATTTCTTCATATTCATGAACCTGCATGGGGAGCCATGTGTTATTTTTTTTAAATGTGAAACAGGAGGGAAGCGCCTATCATCTGTTTGCATATTCCTGGTCCTTCATTAACACAGGACATGTTACTAACTGCATGTATGTTTGGCACAGCACCTTGGGAAGCTCAGAGACTCCTATGGAAAAGGAAAACAAGACTTCCTCGCCATCTGGTATATGTTTATTATATTTTTTCTATATCTTATGTCATCCAGAATACCATGGTAACCACATGTGGTTGTAGGCTTGTACCCATTGTATTTCAGTATTTCACATCCACTGTGGACTATACAAAATAAAATGATGTGCTTTACCTGATGGACTGTCATGAAATTCTAGCGACCACTATCTAATGCATCGCTATTCATAAGAAACTTCCTGCCATTCTCTCACCAGTCACCAGTGAAAACACTCATTTGTTCTGGCTGGTAAAATCTTGTAAGCAGATTACTCTGGCTCAAATGAAGGGAGTGCAAACATTTCGAGCAATGGAGTAACTGGAAGTGCCTATCCAAATAGTGAAAATGAACTAAAGTCCTTGTTTTCGGCTCTCCTGGTAACTCCTTTGTGACTCTCCAGATTCTCTTATTTACCTATTATTTTATGATGTTTCTCATAGCCTCCAAACACCCATGCAGTCATTGTGGCACTTAAGGCCCTTCACTGATAAGTTCATGAAGAAAGCACCGCTTTATCCTCATTTTGGAGTTTCTGGAAAAGATCGGAATTGTATGCTGTGCTACTTGTTCCATAGTTTCAATGCTTTTAGTGATAAGAGTGACTCTACAGCAACTTATCGACTGAGCTGTTTGAGACCTTCTTTTATCAAGATTTTAGAAGAGGCGAATGTTTCGTTGAAGGTTTGTCCTTCAGCCTCTTGTGCCTTTTTTTCTGACCTTTTTTTTTCTTGCTATCTCCTGAAAAAGAATAGATCAATAACTTTTCAAATATTATTTTCTTCACTTATAACTCACTAGAAAGTATAATCAAGAAAAAACTTAATTATAAAAAAACTATATTTGTTTAAATAAACTATTCCTCCATATTGTCAGCACAGAAAATTTGGCTTCACTAATCAGTAGGAATTATCATGATGCAAAATCTTCATTCCAGCATGAACTGGATTGGTTTTAGGCACTACTTATTCCCCAGCTATTGTTACTGTAGTTAGAGAAAAATAGCAAGAAAACATCCCAAATTCCAACTACCTAGCACATTCTAGCAGTCTTCTTTTTTGTCACTGTGGTGTCACACATTTTCTTTTCCAGAACTTGTATGGCGTTAACAATTTTTCTCCAGAACTAGTACAACTTAATAGGGAAAAACAAATCAACTATTAAAATGCTCTATAGACCAAAGGTTCATGTTAAACTTTTTCCCCTCTACCTAAATGATCTTACCTGCTATAAATTCAATTCAAGTCCAAAACAGCATCGCTACTTTTGTTCCTGACCTAATTGCTTTGCTACATCCTAAGTGGATAAACTCTTGCAGAAAGAGCAATTAAATTACTTCTAGAATGAGGATCTTAGCATAAATGTGCAATGTTTCATAATACTAACAATATTTTATTCTGGTTGCAGGAGGAAACAAATTTGGCAGTGAAATATATAGAAATAGTGCTTAACATGGTGCATACATCAGAAACTGCTAAATGTATCAGCAACAACAGTAAAAACATTCTGTACAAAACAACACTCTTCTCCAGTTGTCCTGATCATAGATGCCTCTCGCATGAACTTTTTGGGATGCACAAGAATGCAACAGAGAGCACATATTTTCTCAACGTTGGTGCAAGTGAACTGCGGAATATTGAGGTGTGCTTCAGTGCTTTCTTGTTTCCTTGTTGGATTAGCTTGTTGTAGATAATGCGTTTGTAAACTTTGTCATTTATTAAATTGACTTATGCTTCCTCTCTAGATGAACACTTTTGCCGATGTCATAAAATCTGTCGACAAGAAGTTTCACTGTAATACTGAGAGTAATGCTCACAATCATCCGCCACGTTACTTCACAACTGGTAATGTTGCTTGTTTCAATTAAGACTGAAGTATAATCATGTGACTACATTTACACTATATAGTTGAGAACGTACTGATGGGCAGTGGAAATTAAATGCGGCTGCTTTGGTCTTTTGCACTAACCAAATCAAACCAACTTTACTGGTCTGCAAATGACATCCTTCAGTATAGTCAATGCAACATAAATAACTAGAGATTTTTGACAAATATTATTGGACCGACTAAACACAATAAATCATTATGTAATTCATGTTATGTTCATTTTGTGGTAATTTACACTAAAACTAATTTTGTTCTCTTTGTATATTGCTTTGTCACAGCTTTTGGCTATCCAAGTGAGAATGATAGCCATCTTGTCTCTGGATTACTGGTCAGCATAGCTGCCCCCTTGGACATTAATCCTGTTTATGAAGGCCTGCACTCAGAATGCAAGTATACTATGGTTTCTGCGGTATGTGCAGATCAAAACTTTTATTCTCGGATTCATATTTTTAAATCAATTTGTCCAATATTATATGGCAATGGCCCCAGGACCTGTTCCAGGTTTAAGTCAAATATTAGAAATTTTTCTGTTTACAAAGAGTTTTCCGTTTCAATTTTCTTCCTGATTGAGGTTGATCATCAGGTTTGCTAACAGGTGAGAGCTTGTGTGATTGCATTTAGTGATGCTTTGTTGAGTTCCACTAGTGTTATAGTCTTGGGTATGCAAATTGGACGTGTCTGTATACTCTTGCGAGAGGGTAAAATGGCATGGCATTTGTTACATTTGTACTTATCAGCTGTTGATGTTCTTGCAACCGTCCCAAAAGTGATTTTCCTATAGTTTTGGTCATAAACCATTGATCTTATGAACTTAGCCATGACATTGCAATTCAAACTAGAAAAAACAGGGATTTAGCTGCATTGTTTTGTTGGCATCAAGGTGAAACGCAGAATTTGATTTAGAAAGCAATCAAGCTTAGCCACCTTATCCAGTAGAACGGAATACTAGTACAGGGTATTGGGACATGAAAAGTGGAGCTTATTCTCAATCGAAACTGAGAAGAAGAGGGCACATTTTAACATAGGGGACATGCAAACAATGTCAAGAGCAAATTTGCCGCTCCGCTGTCACATGGGTATTATGCAATTATTTCTTCATTCCGGTTTCTTTTGTTATACACAACATATTGTGTGAACTGAATATTTGATTGGAATAGTTCCGTTGGTTCCCTTGGGTCAATGCCATTGTAGGTAATATAATTAAAATTTCTCCCTCAGGATATTTTGTCCATTTTATTCGTCTCATCACCCTGAAACTTCTTTTCTTTCATAATTTCTTCATAACAGTATACCACCAGCTTGACCAATTACCTTTTTGTCATAGTTATGTTTTTCACCTCTGTAAGTACATAGTTAAAATATACTATTACACAAATGATCAATGCTTGACATACAATCTACTAACATTATCAGGTATTTCGTGCTGAGGGGCGAGATATCTGCCTTGCTCGAGAAGAGGAGAAGTGGCTTGTATATGATAACTCACTCAGGGAAGTCAAGGCAAGTTTGACTCGCATTTATCCTGCATTTTCTTTTGGCCTTTTGCCAGATAACCCCTTTTCATGACGAGACTTTCTCCATGCAGGAATTTGATTCATGGGAGAAAGTGCTTGAAGAATACAGTCGTTCCAGTTTCTGTCCACAGATAATCTTCTTCGAGCGTATCGACCCAGTTTCAGAGGCCGCGGGCACAGAAGTCACAGTCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA035544