BGIOSGA035612

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Revision as of 09:10, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA035612| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA035612, complete gene.| tag = OS11G06...")
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Gene Name

BGIOSGA035612

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA035612, complete gene.

LocusTag

OS11G0615900

Ensembl Transcript ID

BGIOSGA035612-TA

Ensembl Protein ID

BGIOSGA035612-PA

Length

4199

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:20547964..20552162

Sequence Coding Region

20547964..20550355,20550413..20551428,20552097..20552162

Genome Context

<gbrowseImage1> name=IndicaChromosome11:20547964..20552162 source=RiceIndica11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome11:20547964..20552162 source=RiceIndica11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTACTACTGCTGCATTGGTTTTTGCAGGGAAGTCAGTTGCAACGCCGGCCATTTCATTCATTGTGAACAAAGCATTCAGCTATCTCAGTGAGTGGCACCAGGCTGAGGGTATGAAGGTTGTCAAAGATAGGCTGTTACAAATGCTCAACCAGATCCAAGCAGTGTATGATGCTGTTGATCATCAGCAGATCAATGAGCAGAGTCATGCACTGGATAAGTGGCTGTGGCAGTTCCGGGATGCTGTTGAGGGGGCTGAGGATGTACTTGATGAGATAGACTACTACAAGCTTGAGGAAGAGGCTGGAGTCCACAACCTAGAACTTGAGGTGTGTAATTCAGTCGCAAAAAATTTCAAACAAAATTTTGTTCGTAAGGTTGCTAAGTATACTTCTGAGGGGAACATGGTAAAGAATCTTAGGATGGCTCTCACGAGGTTGGATGAAACTGCTGCTGGTGTTGGTACATTCCTTCATCTAACAAGCCGTTTTGGTAGTGCTCTCTTGCCAGATCATGCTGAAAAGATTAATCAAGAGACTAGCTCCACTTTGGTGGCCACTGAGATCTTCGGCCGTGACACAGAGAAGAACGAGGTTATGAGGTGGTTGGTTGACAATATAGAGGGAGATTCGAACACTCCTGGAATCAACCGAGTCCCTGTTTCTGCAATAATTGGAATGGGGGGTATAGGAAAGACTACTCTTGCTCAGATCGTGTGCGAAGAATTAAGAGATTTAACATACTTTGATTGTATTGTGTGGGTACATGTGTCTGATAATTCTTTCAATGCAGCAAGGATAACAAAAAACATCTTGGAGGCACTTACAAAACAGAAGCCTAATGCTGATACTTTGGAAGCATTGCAACACATTCTCAAAGAGAATCTCGAATCAAAGAAGTTTTTGCTCATATTGGATGATGTTTGGGAAGACAGCAATTGGGGTGAATGGCAAAAATTAATGGCTCCTTTCCAGAACAGCCCCCATAACGGAAGTAGAATCCTGTTGACAACTCGAATGACATCTGTAGCAGATATGGTTACAAGTGTGATGCAAAGTAACAATAATTATATGAACCTAAATGGATTAGACGAATATCACAATTTTATGATGTTCAAGAAGTATGCCTTTTATGGTATGAAAACCGAAGATTATGAACATCTCCTGCCACTTGCTGAAAAAATAGCAAAGAAGTTTCAAGGGTGTCCCTTGGTGACAAAGATTGCAAGCGAGCATCTCAGGAGCAATGTAAGTCATCATCATTGGAATAATTTATACAGGCAGTTGGAAAACTTAGAAGGAAAAATGAGTGCCATTATCACAACAGTTCTTCAGTCGAGCTACCACCATCTACCTGAACATTTACAGCTTTGCTTTAGATACTGCAGTATATTTCCAAAAGGTTATGAATTTAAGAAGGACGAAATAGTGAAAATGTGGATGGGTTCAGGATTGATCCTAATTGATAGTGGAACAGAAAGGCCAGAAGACATCGGAGAAAGATACTTGGTGCAATTGGCAAGAAAATCATTCTTTACTTTTGCGACAGTGGGAGATCCTTGTAGCAAATTCTACGCAGAATATTATGTGATGCATGATTTATTACATAAATTGGCATGCAGTGTTTCTGTTGGTGAATGTCTAAGACTTGAATCTAGTGGCTATATGCAGCACAAGTGTACAGTTAGACATTTGTGGATTGCAAACTTCAACAAGTTAACAACCGAGGAGATTAAGGCAATTTCCAGCTTTGAGAATTTGCGTTCACTTATCATTGAAGACTCCTATCATGTCAACGATGTTTGCATAGCTGCATTGGAGGAAGTTGTACAGCTTCTAAGAGGATTGCGGTTATTGAGCTTAAAAGGGATAACCAAGTTCTGTTTGGCAAAAGAAGTTGTTAATAAGCACCTTCGTTATATCTCTTTCTCTGGGATGCAGGATATAGATGGAATCTCTAAACTCTATCATTTGCAAGTGCTTACTGCAGTGAAAAGAATAAGTACAGCACTGAAACAAGTGAATAATATCGAAAACCTTTCTCATCTGCGGTATGTATCATATGGCAGTAACGGATTTGGTGAATTTTTTGTTGGCAGATTAACTTCACTTCAAGAATTGCACAATTTTGAGATTCAACTGAAGGAAGGTTACAGAATAAGTTCACTGAGGAATTTAAGCAGTATTTGCAAGCTACAGATTTGCAACCTTGAGAATGTTGGGACCCATGAAGAGATTATTGAGGCTAAGCTAAGAGATAAATCATATCTTAGATCGTTGTCCTTAAACTGGTCTGAGACTACTAATGTATTGAAGAATGATGATGACCTGATTCTTGATAAACTTGAGTCACATTCTCATCTTGAAAATCTGGAAATATCAGGGTATAATGAGCTGAGAAAATGTAGAAGTTGGGCATACCTCCCAGCTCTTGGAAATTTACAGCGGCTCAAGCATCTTGAATTGCACAAACTTGCAGAATTGAAACGGATCGACCAATCATCAGGCAATTCCCTGCCCCCAAATCTGAAAACTCTAGCGGTGGAAGGTTGCAAAAAATTAGGGGAACTGCCACTTCTACCTTCAAGTTTGACACGGCTAGAAGTAAATGATGTTGGATTGACCACCCTTCCAAGGATATATGACCATCATGTTAACAACATGGATTTCGAAAGCAAGGAAACCAAGCTAATCTCAGTTATCATCAGCAACTGCTCAAATTTAATTTCTCTGGAGGAAAGCTTTCTACTGCAGGAGCACCATATCCGAAGTCTTCGTATCCTAAGGATTGTTGATTGTGAAAAGTTGATCCGAGCTCCTTTGTTATTTTCAGAAATGGATAATCTTGCAGAATTTCATATTGGTAAGTGTTACCGGTTGAGAGTGAGGGAAAACGATGATAATGTACTACTCCCCCGCACACTTAAGGAACTCTCCATGGTGCAGTGTGGTGACCTCCAGCTTCCACTGCTGGAGTCACTGGTTGGTCTGACTAATCTTACGTCATTGAGTCTGTGTAACTGCAGCAGGGTGAGGTCCCTTCCACAGTCAGACGTGTTCCGGAGTCTCAGGTCACTGCGAGAGATGGCTGTGGCTGATTGTACTAGCTTGGCATCCTTGGGTGGGCTTGGAGCCCTTTCATATCTCAATTGGCTGGAAATCACAGAGTGCCCGAGGCTTCAGGGGTATGCCAGATATGATGAAGTGGATGAAGATCCGGTGTTGGAGTTCTCCCTGGAGGTCTACTCTCTCTGGATACATGCCCCCGATATGTTACAAAGGGAGCCGCTTAGGAGATTACACAACACAAAATGCTTGATTATTTCTGTTGGCCGTGATAACATACCTTGGCAATGGATGCAACAAAATAGAACGTCCCTTGAAACCCTGGAGATACTGAAACCAGAGATTAGTGAAGTCCAAGATGTAAGCCCCTACTGTGTGCAAGACCCAGTTAGAAGACAGTTTTATTAG</cdnaseq>

Protein Sequence

<aaseq>MATTAALVFAGKSVATPAISFIVNKAFSYLSEWHQAEGMKVVKDRLLQMLNQIQAVYDAVDHQQINEQSHALDKWLWQFRDAVEGAEDVLDEIDYYKLEEEAGVHNLELEVCNSVAKNFKQNFVRKVAKYTSEGNMVKNLRMALTRLDETAAGVGTFLHLTSRFGSALLPDHAEKINQETSSTLVATEIFGRDTEKNEVMRWLVDNIEGDSNTPGINRVPVSAIIGMGGIGKTTLAQIVCEELRDLTYFDCIVWVHVSDNSFNAARITKNILEALTKQKPNADTLEALQHILKENLESKKFLLILDDVWEDSNWGEWQKLMAPFQNSPHNGSRILLTTRMTSVADMVTSVMQSNNNYMNLNGLDEYHNFMMFKKYAFYGMKTEDYEHLLPLAEKIAKKFQGCPLVTKIASEHLRSNVSHHHWNNLYRQLENLEGKMSAIITTVLQSSYHHLPEHLQLCFRYCSIFPKGYEFKKDEIVKMWMGSGLILIDSGTERPEDIGERYLVQLARKSFFTFATVGDPCSKFYAEYYVMHDLLHKLACSVSVGECLRLESSGYMQHKCTVRHLWIANFNKLTTEEIKAISSFENLRSLIIEDSYHVNDVCIAALEEVVQLLRGLRLLSLKGITKFCLAKEVVNKHLRYISFSGMQDIDGISKLYHLQVLTAVKRISTALKQVNNIENLSHLRYVSYGSNGFGEFFVGRLTSLQELHNFEIQLKEGYRISSLRNLSSICKLQICNLENVGTHEEIIEAKLRDKSYLRSLSLNWSETTNVLKNDDDLILDKLESHSHLENLEISGYNELRKCRSWAYLPALGNLQRLKHLELHKLAELKRIDQSSGNSLPPNLKTLAVEGCKKLGELPLLPSSLTRLEVNDVGLTTLPRIYDHHVNNMDFESKETKLISVIISNCSNLISLEESFLLQEHHIRSLRILRIVDCEKLIRAPLLFSEMDNLAEFHIGKCYRLRVRENDDNVLLPRTLKELSMVQCGDLQLPLLESLVGLTNLTSLSLCNCSRVRSLPQSDVFRSLRSLREMAVADCTSLASLGGLGALSYLNWLEITECPRLQGYARYDEVDEDPVLEFSLEVYSLWIHAPDMLQREPLRRLHNTKCLIISVGRDNIPWQWMQQNRTSLETLEILKPEISEVQDVSPYCVQDPVRRQFY</aaseq>

Gene Sequence

<dnaseqindica>1..2392#2450..3465#4134..4199#ATGGCTACTACTGCTGCATTGGTTTTTGCAGGGAAGTCAGTTGCAACGCCGGCCATTTCATTCATTGTGAACAAAGCATTCAGCTATCTCAGTGAGTGGCACCAGGCTGAGGGTATGAAGGTTGTCAAAGATAGGCTGTTACAAATGCTCAACCAGATCCAAGCAGTGTATGATGCTGTTGATCATCAGCAGATCAATGAGCAGAGTCATGCACTGGATAAGTGGCTGTGGCAGTTCCGGGATGCTGTTGAGGGGGCTGAGGATGTACTTGATGAGATAGACTACTACAAGCTTGAGGAAGAGGCTGGAGTCCACAACCTAGAACTTGAGGTGTGTAATTCAGTCGCAAAAAATTTCAAACAAAATTTTGTTCGTAAGGTTGCTAAGTATACTTCTGAGGGGAACATGGTAAAGAATCTTAGGATGGCTCTCACGAGGTTGGATGAAACTGCTGCTGGTGTTGGTACATTCCTTCATCTAACAAGCCGTTTTGGTAGTGCTCTCTTGCCAGATCATGCTGAAAAGATTAATCAAGAGACTAGCTCCACTTTGGTGGCCACTGAGATCTTCGGCCGTGACACAGAGAAGAACGAGGTTATGAGGTGGTTGGTTGACAATATAGAGGGAGATTCGAACACTCCTGGAATCAACCGAGTCCCTGTTTCTGCAATAATTGGAATGGGGGGTATAGGAAAGACTACTCTTGCTCAGATCGTGTGCGAAGAATTAAGAGATTTAACATACTTTGATTGTATTGTGTGGGTACATGTGTCTGATAATTCTTTCAATGCAGCAAGGATAACAAAAAACATCTTGGAGGCACTTACAAAACAGAAGCCTAATGCTGATACTTTGGAAGCATTGCAACACATTCTCAAAGAGAATCTCGAATCAAAGAAGTTTTTGCTCATATTGGATGATGTTTGGGAAGACAGCAATTGGGGTGAATGGCAAAAATTAATGGCTCCTTTCCAGAACAGCCCCCATAACGGAAGTAGAATCCTGTTGACAACTCGAATGACATCTGTAGCAGATATGGTTACAAGTGTGATGCAAAGTAACAATAATTATATGAACCTAAATGGATTAGACGAATATCACAATTTTATGATGTTCAAGAAGTATGCCTTTTATGGTATGAAAACCGAAGATTATGAACATCTCCTGCCACTTGCTGAAAAAATAGCAAAGAAGTTTCAAGGGTGTCCCTTGGTGACAAAGATTGCAAGCGAGCATCTCAGGAGCAATGTAAGTCATCATCATTGGAATAATTTATACAGGCAGTTGGAAAACTTAGAAGGAAAAATGAGTGCCATTATCACAACAGTTCTTCAGTCGAGCTACCACCATCTACCTGAACATTTACAGCTTTGCTTTAGATACTGCAGTATATTTCCAAAAGGTTATGAATTTAAGAAGGACGAAATAGTGAAAATGTGGATGGGTTCAGGATTGATCCTAATTGATAGTGGAACAGAAAGGCCAGAAGACATCGGAGAAAGATACTTGGTGCAATTGGCAAGAAAATCATTCTTTACTTTTGCGACAGTGGGAGATCCTTGTAGCAAATTCTACGCAGAATATTATGTGATGCATGATTTATTACATAAATTGGCATGCAGTGTTTCTGTTGGTGAATGTCTAAGACTTGAATCTAGTGGCTATATGCAGCACAAGTGTACAGTTAGACATTTGTGGATTGCAAACTTCAACAAGTTAACAACCGAGGAGATTAAGGCAATTTCCAGCTTTGAGAATTTGCGTTCACTTATCATTGAAGACTCCTATCATGTCAACGATGTTTGCATAGCTGCATTGGAGGAAGTTGTACAGCTTCTAAGAGGATTGCGGTTATTGAGCTTAAAAGGGATAACCAAGTTCTGTTTGGCAAAAGAAGTTGTTAATAAGCACCTTCGTTATATCTCTTTCTCTGGGATGCAGGATATAGATGGAATCTCTAAACTCTATCATTTGCAAGTGCTTACTGCAGTGAAAAGAATAAGTACAGCACTGAAACAAGTGAATAATATCGAAAACCTTTCTCATCTGCGGTATGTATCATATGGCAGTAACGGATTTGGTGAATTTTTTGTTGGCAGATTAACTTCACTTCAAGAATTGCACAATTTTGAGATTCAACTGAAGGAAGGTTACAGAATAAGTTCACTGAGGAATTTAAGCAGTATTTGCAAGCTACAGATTTGCAACCTTGAGAATGTTGGGACCCATGAAGAGATTATTGAGGCTAAGCTAAGAGATAAATCATATCTTAGATCGTTGTCCTTAAACTGGTCTGAGACTACTAATGTATTGAAGAATGATGATGACCTGATTCTTGATAAACTTGAGTCACATTCTCATCTTGAAAATCTGGAAATATCAGGGTATAATGGTCTTTGATTTCCAACTTGGCTAAGCCATCCATGCCTGATAAATATGGTGTCACTAGAGCTGAGAAAATGTAGAAGTTGGGCATACCTCCCAGCTCTTGGAAATTTACAGCGGCTCAAGCATCTTGAATTGCACAAACTTGCAGAATTGAAACGGATCGACCAATCATCAGGCAATTCCCTGCCCCCAAATCTGAAAACTCTAGCGGTGGAAGGTTGCAAAAAATTAGGGGAACTGCCACTTCTACCTTCAAGTTTGACACGGCTAGAAGTAAATGATGTTGGATTGACCACCCTTCCAAGGATATATGACCATCATGTTAACAACATGGATTTCGAAAGCAAGGAAACCAAGCTAATCTCAGTTATCATCAGCAACTGCTCAAATTTAATTTCTCTGGAGGAAAGCTTTCTACTGCAGGAGCACCATATCCGAAGTCTTCGTATCCTAAGGATTGTTGATTGTGAAAAGTTGATCCGAGCTCCTTTGTTATTTTCAGAAATGGATAATCTTGCAGAATTTCATATTGGTAAGTGTTACCGGTTGAGAGTGAGGGAAAACGATGATAATGTACTACTCCCCCGCACACTTAAGGAACTCTCCATGGTGCAGTGTGGTGACCTCCAGCTTCCACTGCTGGAGTCACTGGTTGGTCTGACTAATCTTACGTCATTGAGTCTGTGTAACTGCAGCAGGGTGAGGTCCCTTCCACAGTCAGACGTGTTCCGGAGTCTCAGGTCACTGCGAGAGATGGCTGTGGCTGATTGTACTAGCTTGGCATCCTTGGGTGGGCTTGGAGCCCTTTCATATCTCAATTGGCTGGAAATCACAGAGTGCCCGAGGCTTCAGGGGTATGCCAGATATGATGAAGTGGATGAAGATCCGGTGTTGGAGTTCTCCCTGGAGGTCTACTCTCTCTGGATACATGCCCCCGATATGTTACAAAGGGAGCCGCTTAGGAGATTACACAACACAAAATGCTTGATTATTTCTGTTGGCCGTGATAACATACCTTGGCAATGGATGCAACAAAATAGAACGTCCCTTGAAACCCTGGAGATACTGAAACCAGAGGTGAAGCTTTTAGTAAATAACCTTTGCTCTCTCAAAAGATTGGAATTTGATACAACTCATCGTTTCCTTGAGTTTCCCATTCTACCATCTTCTCTGGAGTCTTTCATTATTAGAAGATGTAATCCAGAGTTGTTGGCACGCTGGAAAAGGAAAGATAGTTCTGAATGGGACAGGATTTCACTCATCCGCCATATGAGAATAGGTATGCCTTGCTTTTGCATCTATCCTTGTCATCATCTCCTGCAATCTAATGGTCACTTGGTCAGTCCTAGAGATGTTATTCGTATGTTACTTTGTTTTTCCTTCTAGCAAAATTTTAAGTTTGTTTTTCACATGTTAACCAAAACGATCCCCTGTTAGAATCTGATTTGGGCTGTATCTCCTGCCAAGCTGACTGTAAGTTAATCTACAGGAGATGCATACTACAATTTCGGGAAACCAGCGGACAAATTTTATAGCTGTGATTCTTCAGAAGACAAGACAAGAAATAGGTATGTGAGACACGTACTACTGTTTCAGGGAACCAGCTGACCAACTTTATAGCCGTGATTCTACAAAAGAGAAGATAAGAAACAGGTACTTGTTCTACATCTTTCACAATAGATCAGAAATTCGTCAATTCTGATACTCCATTATTATTACTAATCTATTTCACTGGCACTCTACAGATTAGTGAAGTCCAAGATGTAAGCCCCTACTGTGTGCAAGACCCAGTTAGAAGACAGTTTTATTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA035612