BGIOSGA035780

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Revision as of 08:09, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA035780| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA035780, complete gene.| tag = OsJ_369...")
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Gene Name

BGIOSGA035780

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA035780, complete gene.

LocusTag

OsJ_36971

Ensembl Transcript ID

BGIOSGA035780-TA

Ensembl Protein ID

BGIOSGA035780-PA

Length

4512

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:22619053..22623564

Sequence Coding Region

22623323..22623564,22622885..22623046,22622520..22622702,22622348..22622405,22622157..22622207
,22621990..22622072,22621602..22621689,22621337..22621381,22621185..22621259
,22621011..22621079,22620809..22620924,22620121..22620233,22619819..22619898
,22619481..22619601,22619302..22619368,22619053..22619182

Genome Context

<gbrowseImage1> name=IndicaChromosome12:22619053..22623564 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:22619053..22623564 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCGCCGGCGGCGAGGAGCCTCCTGCTATCGGCCGCCTGCCGTCAACGCCGCTGCTTCTCGACGGAGGCCCCGTCGTCGACTCCGCAGCAGCAGCTCCTCCCCAAGGGGAAGCGGTGGGACGCGGTGGTGATCGGCGGCGGCCACAACGGGCTCGCCGCCGCCGCCTACCTCGCCCGCGCCGGCCGCTCCGTCGCCGTGCTCGAGCGCCGTGGCGTCCTCGGCGGCGCCGCCGTCTCCGAGGAGCTGGAGCTGGAGAGGCATGGGCTGAAGCTCTTGCCGCGGAGCCCGTCGTCATTCACGCCATGCCTAGACGGCAGGTACCTCCTTCTCGGCCCGGACGCCGAGCTGAACCACTCGGAGATCAGCAAGTTCTCCGAGAATGATGCCTGTGCATACCCAAGGTACGAGGAGAAGCTGGAGAAGTTCTGCAAACTCATGGACTTTGTCATAGACTCGCCTCCCCCTGAGATGAGGCATGAATACCACCTCTCCATGGTGGACAGGATGAAGGATAAGGTTGACAAGTCTGTGTTCTGGAGCAAACTTCTTGGGATTGTGATGCAGCAGGGGCAGAAGGACATGGTGGATTTCTTTGACCTTCTCCTTTCACCAGCATCCAAGATCTTGAACAACTGGTTTGAGGGTGATGTGTTGAAGGCAACTCTTGCGACTGATGCTGTGATAGGTTCTATGGCTGGTGTCCACACTCCAGGATCTGGTTATGTTCTTCTGCACCATGTTATGGGGGAAACTGGTGGCCAACGTGGAGTATGGGCGTATGTTGAAGGTGGTATGGGTTCAGTATCGTCAGCTATAAGCAAAGCAGCTCTTGAAGCAGGTGTGGAAATTGTAACAAATGCAGAGGTTTCCCAAATATCTGTTCATCACACTTCTGGGAAGGTACAGGGGATAGTATTGGCTGATGGAACAGAGGTGCTGACATCAGTTGTTTTATCAAATGCAACTCCATATAGAACATTTGTGGACCTAGTGCCTGCCAATGTTCTTCCAGACAACTTCCTCTCTGCTATAAAAACTGCAGATTATAGCTCTGCAACAACGAAAATTAATGTGGCTGTTGACAGGCTGCCACAGTTTTCCTGTTGCAAAGACTTTAATCCTGAAGGCGGTCCAGAACACATGGGCACCATACACATTGGATCTGAAAGCATGGAGGAAATCGATCTAGCGTACAGGGAAGCTGCAAATGGTGTCTCATCCACAAGACCTGTTATAGAAATGACGATTCCTTCTGTGTTGGATAAGACCATCTCCCCACCTGGCCAGCATGTTATTAACCTTTTTGTTCAGTACACACCATACAAACTTTCAGAAGGCAGCTGGCAGGATTCTAATGTTAGAAAATCCTTTGCTGAAAGATGCTTTTCCTTGATTGATGAATATGCACCGGGTTTTAGCTCATCAGTGGTAGGCTATGATATGCTGACTCCACCTGATCTTGAAAGGGAGTTTGGCCTAACAGGAGGCAACATCTTTCACGGCGCAATGGGTTTGGATTCACTTTTCCTCATGAGGCCCGCCAAGGGATGGTCAGATTACAGAACTCCAGTGAAGGGATTGTACCTCTGTGGCAGTGGTGCACACCCAGGAGGTGGGGTGATGGGCGCTCCGGGCCGTAACGCTGCCTCCGTTGTTTTGGAAGATCTCAGGACAAAATAG</cdnaseq>

Protein Sequence

<aaseq>MSPAARSLLLSAACRQRRCFSTEAPSSTPQQQLLPKGKRWDAVVIGGGHNGLAAAAYLARAGRSVAVLERRGVLGGAAVSEELELERHGLKLLPRSPSSFTPCLDGRYLLLGPDAELNHSEISKFSENDACAYPRYEEKLEKFCKLMDFVIDSPPPEMRHEYHLSMVDRMKDKVDKSVFWSKLLGIVMQQGQKDMVDFFDLLLSPASKILNNWFEGDVLKATLATDAVIGSMAGVHTPGSGYVLLHHVMGETGGQRGVWAYVEGGMGSVSSAISKAALEAGVEIVTNAEVSQISVHHTSGKVQGIVLADGTEVLTSVVLSNATPYRTFVDLVPANVLPDNFLSAIKTADYSSATTKINVAVDRLPQFSCCKDFNPEGGPEHMGTIHIGSESMEEIDLAYREAANGVSSTRPVIEMTIPSVLDKTISPPGQHVINLFVQYTPYKLSEGSWQDSNVRKSFAERCFSLIDEYAPGFSSSVVGYDMLTPPDLEREFGLTGGNIFHGAMGLDSLFLMRPAKGWSDYRTPVKGLYLCGSGAHPGGGVMGAPGRNAASVVLEDLRTK</aaseq>

Gene Sequence

<dnaseqindica>1..242#519..680#863..1045#1160..1217#1358..1408#1493..1575#1876..1963#2184..2228#2306..2380#2486..2554#2641..2756#3332..3444#3667..3746#3964..4084#4197..4263#4383..4512#ATGTCGCCGGCGGCGAGGAGCCTCCTGCTATCGGCCGCCTGCCGTCAACGCCGCTGCTTCTCGACGGAGGCCCCGTCGTCGACTCCGCAGCAGCAGCTCCTCCCCAAGGGGAAGCGGTGGGACGCGGTGGTGATCGGCGGCGGCCACAACGGGCTCGCCGCCGCCGCCTACCTCGCCCGCGCCGGCCGCTCCGTCGCCGTGCTCGAGCGCCGTGGCGTCCTCGGCGGCGCCGCCGTCTCCGAGTCCGACCTCGTCCCGGGCTTCCGCTTCTCCCGCTGCAGCTACCTCCTCAGCCTCCTCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCCCAATACCCACCCAAATACTATTTGTCAATCTCAAGTCCCACAGCTCTGTGTTCATATGCATTTCTGTAATCATTCTGCAAATGCGGGTAATAATATTGCACTGTACTAACTGAATTCTGATGCTGCTAGCGTTGATGTGGGTTCTTTTCTTGATAGGGAGCTGGAGCTGGAGAGGCATGGGCTGAAGCTCTTGCCGCGGAGCCCGTCGTCATTCACGCCATGCCTAGACGGCAGGTACCTCCTTCTCGGCCCGGACGCCGAGCTGAACCACTCGGAGATCAGCAAGTTCTCCGAGAATGATGCCTGTGCATACCCAAGGTGGTAGACTCACTGATATTTTGACTTGTTTTCAGTTATAAAATCTTGGAGTGGTGCTTGATTATATGAACTCTGTTTTCACTGTGAAATTTAGGTAGAAAATCGGTCATGTGACTAAATGACCGTGCATGTTTTTTTTATCTTATGATGATCTTAGTTGGGTAGTGTACATGTAAATGTAGGTACGAGGAGAAGCTGGAGAAGTTCTGCAAACTCATGGACTTTGTCATAGACTCGCCTCCCCCTGAGATGAGGCATGAATACCACCTCTCCATGGTGGACAGGATGAAGGATAAGGTTGACAAGTCTGTGTTCTGGAGCAAACTTCTTGGGATTGTGATGCAGCAGGGGCAGAAGGACATGGTGTGAGTATAAATACTGACCTTCTGCAAATGCCACCATCAACATGACTCGACAGTGCTATGCGTACATTTAATCTTCTTCTTTTTTCTGTTTCCTTGGAAATATGTTATTCACAGGGATTTCTTTGACCTTCTCCTTTCACCAGCATCCAAGATCTTGAACAACTGGTTTGAGGTTGATATCTTGTTTACCCATTCTCTGAAATACTTCTTATCACATTGTTCATATGAAGCAACGTGGAGTTTCACTATTGAATTGACAATATTCACATGTTTTTCTTGTAACCATGGACAATTGTGTTTTTTTAACTGCAGGGTGATGTGTTGAAGGCAACTCTTGCGACTGATGCTGTGATAGGTTCTATGGTAAGGGCGCTTTGGATGAACCAAGAAATGTGTTGTGGCCAATGGTAATGGTTTAGCATTTGACGCTGCATGGACTTTCTACAGGCTGGTGTCCACACTCCAGGATCTGGTTATGTTCTTCTGCACCATGTTATGGGGGAAACTGGTGGCCAACGTGGAGTATGGGCGTATGACTCTTAACCTGAGCTTCTCTCTGTTATTCTGTTCCAGCAGAAAAATAATAGGTCCTTCATTGTTCTAGGCCTGAAACCATGTCCAAGCCTTTGTGGCCCTAGCATCAGGAATTGTTTTGCTGGCGCATATCTCCACTGTCTAGTCAAACAGGGCAAATGCCATAGAATGGTCATATGGTTTCTAGCCAAATATGCTGGTTTTAGCATTGTTGGTTCATTAGTAGTTGGTTTCCTGTTTCTTCTTATTTTGCTTGTTGAAAAACTTATGTGGTAAAACAAAAACACTCGCTTCAGGTATGTTGAAGGTGGTATGGGTTCAGTATCGTCAGCTATAAGCAAAGCAGCTCTTGAAGCAGGTGTGGAAATTGTAACAAATGCAGAGGTGCATTTTCTCTTCTTATGCCATGATATTACCTCTTTGATTACATATGGTGGAGCAGCATTCAAATTTGAATAGAAAAAAATGAGTAACTATTTATTGACAGCTGTAAAAAGCTGGCTTTTTCTACAAGAAAAGGTCCAAGTCTATTTAGTGGTGAATTATTATCCTGCACCCAGATTTCTGTTTAAGCAACATGCCTCACTCTAGTGGTTTTATATAGGTTTCCCAAATATCTGTTCATCACACTTCTGGGAAGGTACAGGGGGTAAGTTCTTCGACTAACCGATAAATGGTACTCCTATTTCATTTCTTTGAACCTCTTGAAATTATGGGAACTTGTAGATAGTATTGGCTGATGGAACAGAGGTGCTGACATCAGTTGTTTTATCAAATGCAACTCCATATAGAACATTTGTGGTAAGAGCTACTCAGAATATATAACAATGTGAAGATATACCTGTTCCAATTTTGTAGACACAATGAAACAAATATTTGTACACTAATATCTGGTTTCCTTTTCAGGACCTAGTGCCTGCCAATGTTCTTCCAGACAACTTCCTCTCTGCTATAAAAACTGCAGATTATAGCTCTGTAAGAACGTACTTTGAAGCATAACATAATAAATAAGTGTTATAATATTGATTGATAACAATGTAATATGATTCTGTGGAGAGCAGGCAACAACGAAAATTAATGTGGCTGTTGACAGGCTGCCACAGTTTTCCTGTTGCAAAGACTTTAATCCTGAAGGCGGTCCAGAACACATGGGCACCATACACATTGGATCTGAAAGGTAGGTTACTGAAGTTATGGAACCTTTTCTACTTCAACTATGATGATCTGCGGCATGTTATTGCATTCAGTTGTGTTAATCTTTGTTCTGCTGTAGCTGTACACAATCGAAAATCTTTGAGACACCAGCTTTTATATTGCCTCCCGTTCCTGTGTAGTATAGATTGGTTGCCAACATGAGTAATGAGTAGGCAAGTGAAATAATCTCTTAGTTCCATGATGCCATTTTTCCGTTAACGATCGATGACCTGCACGTGTATATAGAAATATCATGTCTCCATTAGTACCTTAGGACAGTACTGAGTGTAATCTGAACATGTTAACGGTAATATACTACTACATCTAGTCAAAAACATTTGACATTGGAAGAACTAATCTCAGCTCTCCCAACGTCAAATACATTTGACTGGGATCATGCAGCCTACTGCAAGTTTCTCATTATTTTGGTGATTGGAAAATACTGGATGATGTAGCGTTTTGTTGGATTTTCTGACAACCATATATGCAAATCCTTATCTTTTCATGTTATTGAACTTTATCCTTATCTTTTCATATTGAACTTTACTGGAACTCCAGCATGGAGGAAATCGATCTAGCGTACAGGGAAGCTGCAAATGGTGTCTCATCCACAAGACCTGTTATAGAAATGACGATTCCTTCTGTGTTGGATAAGACCATCTCCCCACCTGGTATGCCAATTTCTTGTTCCCAGCATTGCAGTTGCATAAAAGTGTGGCGTCTGATTTGTATAAACTATAATTGTGCCCTACAGTTCATATATCCAAGATTAATTTTCCCCACCCCCCAAAAAATCCAAGTTTAATTTGGATATGTGGCTGTGAAACCTCACCTTCTTCGTATGCTTTGTATAATCTGAATCAATGTTCATCCTTTGCTTTATCCTTTGATAGGCCAGCATGTTATTAACCTTTTTGTTCAGTACACACCATACAAACTTTCAGAAGGCAGCTGGCAGGATTCTAATGTTAGAGTAAGTAGTTCCTTCTTGAAGTTTGACGTCATGATGCACTTCGTTTAATTTATGCTTTCACGGCTGCACAGATTTTGCTGTGTATGTTTTCCCACATATGCCTTTCTCCTTAATCGAACAGAGTGGATGATGATGATGCCCTTATGCATTATTGTTTGTCACCAGTTACTATCCACAGAGAGGCACCCCTGACATTTTAATTGAAACCAATTTTCAGAAATCCTTTGCTGAAAGATGCTTTTCCTTGATTGATGAATATGCACCGGGTTTTAGCTCATCAGTGGTAGGCTATGATATGCTGACTCCACCTGATCTTGAAAGGGAGTTTGGCCTAACAGGTAATCTGTTTGCGTGGTATACGTAGTGTACCTCCCTTCTTGCGGAGTGCTCACCGTTGCTGTTTTCATCTGAAAACCTTGTTAAATGAGCATTTGATTCACATTTTTACAGGAGGCAACATCTTTCACGGCGCAATGGGTTTGGATTCACTTTTCCTCATGAGGCCCGCCAAGGGATGGTATGTCTATACCTCTAACATGCATATTCTTTCACCCTTCTTCTTCTAGTCGGCGAATCTTAGACCTGTCAAGGTTTTCATCTGTCATGATCGCGAACATGCCGTCGCCACTTCTTCAGGTCAGATTACAGAACTCCAGTGAAGGGATTGTACCTCTGTGGCAGTGGTGCACACCCAGGAGGTGGGGTGATGGGCGCTCCGGGCCGTAACGCTGCCTCCGTTGTTTTGGAAGATCTCAGGACAAAATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA035780

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA035780&oldid=52085"