BGIOSGA036225

From RiceWiki
Revision as of 08:18, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA036225| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA036225, complete gene.| tag = OsI_382...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA036225

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA036225, complete gene.

LocusTag

OsI_38264

Ensembl Transcript ID

BGIOSGA036225-TA

Ensembl Protein ID

BGIOSGA036225-PA

Length

2974

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:13201610..13204583

Sequence Coding Region

13204427..13204583,13202744..13203595,13201610..13202124

Genome Context

<gbrowseImage1> name=IndicaChromosome12:13201610..13204583 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:13201610..13204583 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGATAATACGGCAGGTTCTTCTCAACCAATTATACGTCGTCGTGGTCGACCACGCCGGCAGCCTTCTAATATCCCGATCCCACGTCCTAATCAAACTGTTGCTGCTGAATCTCGACGTAGGCGTAGGCAAGTTATCGATGCAAATAGGAACAGAGAAATGTTGAATACAAATAATCCCATTGTTCAACTATTCAGAACAACACATGAAAGAATATCCCTAGACGCATCCGATCAATTTTGCATAAGGTTATTTGGTAAGCCGGATGCACATGGAGATATTTATAGTGCTCCAGTCGCTTCTGAAGTTGTTGGCCTGATTGTTGGTGATGTTGGATCAGCTGATGTAGGGCGAGATATTATAATCCAAGATCGTGCATCACGTTTGCAGCGAATCAATGAAAATCACCGCAAGTTTATGGCCATGCAATATCCATATGGAAACCTCACATATCGTACAACAGCACGCACTCAATCCATGCAACGGAATAAAGTTACAATGCTAGAGTGCTATGCATATAGGTTGCATGATAGGCCAGGAGACTTCCATACACCGTTACGGTGTAAAAGGTTAACACAATCTTATGAAGTAGATTCTTATTGTTGTGTCGAGGGGAGCCGGATAGCACATTATCGCACACCAGCCTTCCAAAGTAAATATAGATCATCACCATTCAACTCATTGATTAATTCTGTCTCAAGAGGTATTACATTTGGATCTTCTATTGGGCAAAGGATAATATTGCCAGCTTCATTTACCGGAGGACCTCGGTACTTGTATCAAAATTATCAAGATTCTATTGCTATTTGTAGAAAATATGGTTGCCTTGATCTTTTTTTGACATTCACATCGAATTCTGCTTGGCCTGAAATTAGAGAAGCTTTAGCATCAATTCCTGGCCAACAACCTTCCAATCGTCCAGATATTGTCAATAGGGTTTTCAAAATGAAGCTCAATATTTTAATGGATGATATAAAGAAGCACAAATTTTTTGGCCCTATAAATGCAGGATCACAATCATCAAGTGAAACTATCAATGAAATAGATAATTATCTAGAATGTCGTTGTGTCACTCCAAATGATGCTGCTTGGCGATTGCAACAATTTGACATCCACCACACAGATCCCTCCGTAGAACGCCTTCCTGTCCATCTCCCATTTGAGAATAACGTTATTTTCACAGAAGATGATGATCTTGAAGAGGTCATTGAAGATCCAAACAGCTCTACAACCAAACTAACTGCATGGTTAGAAGCTAATAGGGAGAACCCTTCTGCTAGGCAACTTACATATATAGAATTCCCTGAACATTGGACATGGCACAATCAAGGCAAATATTGGGATGGTCGTCGTGGTTCTCAACGTAGAATTGGCCGCATTGCTTATGTAAACCCTTCACAAGGAGAAGCTTACTATCTGCGAATGCTACTGCACATCGTTAAGGGCCCTAGATCCTTTGCTGAAATCAGAACTATATCAGGTCATGAATATCCTACATTTCGGGCAGCATATGTGAAGCATTAG</cdnaseq>

Protein Sequence

<aaseq>MDNTAGSSQPIIRRRGRPRRQPSNIPIPRPNQTVAAESRRRRRQVIDANRNREMLNTNNPIVQLFRTTHERISLDASDQFCIRLFGKPDAHGDIYSAPVASEVVGLIVGDVGSADVGRDIIIQDRASRLQRINENHRKFMAMQYPYGNLTYRTTARTQSMQRNKVTMLECYAYRLHDRPGDFHTPLRCKRLTQSYEVDSYCCVEGSRIAHYRTPAFQSKYRSSPFNSLINSVSRGITFGSSIGQRIILPASFTGGPRYLYQNYQDSIAICRKYGCLDLFLTFTSNSAWPEIREALASIPGQQPSNRPDIVNRVFKMKLNILMDDIKKHKFFGPINAGSQSSSETINEIDNYLECRCVTPNDAAWRLQQFDIHHTDPSVERLPVHLPFENNVIFTEDDDLEEVIEDPNSSTTKLTAWLEANRENPSARQLTYIEFPEHWTWHNQGKYWDGRRGSQRRIGRIAYVNPSQGEAYYLRMLLHIVKGPRSFAEIRTISGHEYPTFRAAYVKH</aaseq>

Gene Sequence

<dnaseqindica>1..157#989..1840#2460..2974#ATGGATAATACGGCAGGTTCTTCTCAACCAATTATACGTCGTCGTGGTCGACCACGCCGGCAGCCTTCTAATATCCCGATCCCACGTCCTAATCAAACTGTTGCTGCTGAATCTCGACGTAGGCGTAGGCAAGTTATCGATGCAAATAGGAACAGAGGTTTGTTAGAAGATTAACATTCCTACAAGTTGTCAGTATTTTATGCAGACAAAAAAAATGACTCATATTATCAATTTCATCATTTTTCCCTAGCATCAACCTCTGCAGATCAACGAATATTACGCCCACGGTTAATTGGTGAATCTTCTAATTCTAATCATATAGCACAAAATGAACCCCATATTCATATAGGTTCATCTACATCCAATCAATTATTCAATCACAGGCGTAAGTTGTCTTTTCTACTCCTAGGATCTAACCACTTTAAGGTATCCATTTGCTGTAAAGATTCCTTCACATATACCCATGACACACCTTTCAGGCACTATATTTGAACCATTGAATCTTGGTGGTCCACATCATTCTTGCAGCCACTGTGGTGCTTTTTTTTTTGGTATGAGGAGCGAACACGTAGAGAGAGACATACTTCAAATCCATCATATAATTTGTGTTGCAAAGGTGGGAGAATATGGCTGCCACCCTACCAACCTCCTCCACAGCCATTGTTGGATTTATTGACCTCACAAAACAGCACTCTTTCTAACCACTTCTTTGATCATATTCGGCAATACAATAGCATGTTTGCAATTACTTCAATGGGAGCTAAAATTAATGAGTCCATAAATGATGGAAGAGCACCATATGTTTTCAAAATTAGTGGTCAAGTCTGTCATCGAATCGGTTCTCTGCTCCCACCACAAGGTCATCGTCCAGAATATGCGCAATTATATATTTTTGATACAGAACATGAGATCTCAAACCGGATCAATGTTGCTTCATCTCCCCGTGTCACTTTCCATGCTAATGAACAAATTGTTGCATCCTTGATAGAAATGTTGAATACAAATAATCCCATTGTTCAACTATTCAGAACAACACATGAAAGAATATCCCTAGACGCATCCGATCAATTTTGCATAAGGTTATTTGGTAAGCCGGATGCACATGGAGATATTTATAGTGCTCCAGTCGCTTCTGAAGTTGTTGGCCTGATTGTTGGTGATGTTGGATCAGCTGATGTAGGGCGAGATATTATAATCCAAGATCGTGCATCACGTTTGCAGCGAATCAATGAAAATCACCGCAAGTTTATGGCCATGCAATATCCATATGGAAACCTCACATATCGTACAACAGCACGCACTCAATCCATGCAACGGAATAAAGTTACAATGCTAGAGTGCTATGCATATAGGTTGCATGATAGGCCAGGAGACTTCCATACACCGTTACGGTGTAAAAGGTTAACACAATCTTATGAAGTAGATTCTTATTGTTGTGTCGAGGGGAGCCGGATAGCACATTATCGCACACCAGCCTTCCAAAGTAAATATAGATCATCACCATTCAACTCATTGATTAATTCTGTCTCAAGAGGTATTACATTTGGATCTTCTATTGGGCAAAGGATAATATTGCCAGCTTCATTTACCGGAGGACCTCGGTACTTGTATCAAAATTATCAAGATTCTATTGCTATTTGTAGAAAATATGGTTGCCTTGATCTTTTTTTGACATTCACATCGAATTCTGCTTGGCCTGAAATTAGAGAAGCTTTAGCATCAATTCCTGGCCAACAACCTTCCAATCGTCCAGATATTGTCAATAGGGTTTTCAAAATGAAGCTCAATATTTTAATGGATGATATAAAGAAGCACAAATTTTTTGGCCCTATAAATGCAGGTATCAAATTTTACATTGGTTTCCAAAATATAAATTTTCCTTTCTCTTCCTTTTGTAGGTTTAAACATGCATGTTACCACCATGCAACCCTTAAAACATATCTTTTTTCATGCAGTTATCTATACAATCGAATTTCAGAAACGTGGTTTACCTCATGTTCACATCATCATATGGTTGGCCAAAACAGAACCCTTAGATTCCAAGAAGATTGATCATTATATTTCAGCTCAATTACCAGATCCTGCAATTGACCAAATAGGATTTGAGGCTGTATCTTCTTTTATGGTGCATGGACCTTGCGGTCCTCACAACACTTCTTCAATCTGCATGTCTGAAGGAAAATGCATAAAATTCTACCCTAAGGAATTCTGTGAAGAAACAACTATATTAGAAAATGGTTTTACACAGTATGCACGTCCAAACAATGGAAGAACTGTTACAAAAAATGGAGTTGATGTTGATAACAGATTTGTGGTTCCTCATAATGTTGATTTGGTTGTGAAGTTTCAGGCACATATAAATCTAGAGAAAGTTAATTATGATGGCATGCACAAATATATTTTTAAGTATGTCACAAAGGGATTTTATTGTTCAAGGGTTGGAATTCACTCTAATTCAGGATCACAATCATCAAGTGAAACTATCAATGAAATAGATAATTATCTAGAATGTCGTTGTGTCACTCCAAATGATGCTGCTTGGCGATTGCAACAATTTGACATCCACCACACAGATCCCTCCGTAGAACGCCTTCCTGTCCATCTCCCATTTGAGAATAACGTTATTTTCACAGAAGATGATGATCTTGAAGAGGTCATTGAAGATCCAAACAGCTCTACAACCAAACTAACTGCATGGTTAGAAGCTAATAGGGAGAACCCTTCTGCTAGGCAACTTACATATATAGAATTCCCTGAACATTGGACATGGCACAATCAAGGCAAATATTGGGATGGTCGTCGTGGTTCTCAACGTAGAATTGGCCGCATTGCTTATGTAAACCCTTCACAAGGAGAAGCTTACTATCTGCGAATGCTACTGCACATCGTTAAGGGCCCTAGATCCTTTGCTGAAATCAGAACTATATCAGGTCATGAATATCCTACATTTCGGGCAGCATATGTGAAGCATTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA036225