BGIOSGA036247

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Revision as of 08:18, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA036247| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA036247, complete gene.| tag = OsI_382...")
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Gene Name

BGIOSGA036247

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA036247, complete gene.

LocusTag

OsI_38221

Ensembl Transcript ID

BGIOSGA036247-TA

Ensembl Protein ID

BGIOSGA036247-PA

Length

6546

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:12372894..12379439

Sequence Coding Region

12379296..12379439,12379134..12379179,12379035..12379061,12378052..12378175,12377108..12377187
,12374999..12375102,12372894..12372932

Genome Context

<gbrowseImage1> name=IndicaChromosome12:12372894..12379439 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:12372894..12379439 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGCGCCGATGGCGGCGGCGGCGGAGGCCGGAAGAGCTCGTCGCCGGCCGGGAAGCCGGCGGAGGCGGCACGGGCGGTGAGCCTGCTCGCCGGACTCCCCTCGCGGGGCAACTTCGTCGCCGACAGCATCGCGTCCAGCATGGGAGGCCTCCCGATTTATGTCTGCCTGCACGACACCGCTCCTCCAGGAATGAGGGCTGATTGTAGTGCTAGTGAGGGACAAGTTATAGACACAGACACCACAAACATTTTAATCAGATCTCTCCAGTTGAGCAAACAGAAAAATGAGGCAAAAGATGTAGGATCAAGGACTCCAGGAGAAAGCAGCAAGGGGAAAAGGTCTGCTTCCAGACTTTTAGATGGCAAGAATCCATCTAAAAGAGCTAACACTGGCAGCACAGCAGGGTCATCTGCCCATGGGGAATTGGGATCTGTTTTTTCTGAGCAGACGCTCCAATCATTTACGGTGGAGAAGTTGCGTATTCTTCTGAAAGAGAGAGGGCTCTCACCAAAAGGCAAAAAGGATGAACTGATCGCCCGCTTAATTGAGTCCTCGGAGTGA</cdnaseq>

Protein Sequence

<aaseq>MGADGGGGGGRKSSSPAGKPAEAARAVSLLAGLPSRGNFVADSIASSMGGLPIYVCLHDTAPPGMRADCSASEGQVIDTDTTNILIRSLQLSKQKNEAKDVGSRTPGESSKGKRSASRLLDGKNPSKRANTGSTAGSSAHGELGSVFSEQTLQSFTVEKLRILLKERGLSPKGKKDELIARLIESSE</aaseq>

Gene Sequence

<dnaseqindica>1..144#261..306#379..405#1265..1388#2253..2332#4338..4441#6508..6546#ATGGGCGCCGATGGCGGCGGCGGCGGAGGCCGGAAGAGCTCGTCGCCGGCCGGGAAGCCGGCGGAGGCGGCACGGGCGGTGAGCCTGCTCGCCGGACTCCCCTCGCGGGGCAACTTCGTCGCCGACAGCATCGCGTCCAGCATGGTGCGTTCGTTCCCCCCCACCCCTAAAATGGACCAGCCTTTTTCTTGGCATGTTAGAAGGGTTCTTGTGAAAAGCCCTCTGATTTTTATGATTTTTTATTATTATTTTTTGCGCAGGGAGGCCTCCCGATTTATGTCTGCCTGCACGACACCGCTCCTCCAGGTTTGTTTGTGATTTTCTAGGATAATCAAGCTTTACTTTTATTATTGTGATGATGCTAATTTGTTGTTTTAGGAATGAGGGCTGATTGTAGTGCTAGTGGTGTGTACTGTGGAGAGACAGATTTGAAGTAGAAGGATGATCCTTTCTACTAGGGTTTTATGTAGAATTTTCCTTGTAAGAACGCAGTCATCTTGCCTAGGTTTTGTTCTTTCGATTGGCAATGCTGTTGGCATCATGCTTAATTTGTGGTTACTGAATTTGTTTTGCTGATGTTAAGAGTTGGAATTTCTATGGGTTTACTCAGAATGTCTCTTGCAGGAAAGCTAAAGTCTATATTTGTTCTTTGGATTTGTGGTGGCACTGTTGACTGTTGTCATGCTTATTTTATGGTTTCCTGGAGTAGTTTACAGGTTTTCAGAGTGAGAATTGCAGGTGTTTGTGAAATATTGTACTGAACCATTCTTTGGTGGTTAAATAGATTTAAATCTTCTGGATGTACAGTGTAGGAGTTTAGTAGCTTGGCAATGGGGATAAATGGTTTGCTTTCCATTCAATGAAATTTAGATTTAGTAGTGTTTGGGAGTGAATTTTACTGCCTTTGAGTTTTCTAGTGATTACCTAAAGTGAGCTGTCCCTAAGGAAAAAATGAAGCTACAGAGAAGAATTTCTGATGTTGCTTTTTTTTTTCTTCGGATCGAGTGAGACATTGTGCTGCTGTCACAAAACTTTTGCCATGTGTTTCTTGGGAGTCTTATCTTTTGAATATCATTTTTGGACGTATATGATTTACATTTTATAGTGGCAGTTGTTAGTATATGATCTATTGTCAGACCATGATCTTTTACATATTTTCATTACTTATGTTCTTATGATAAAGCTGATTACTGATGACACAAACAGATCATTTTAAGGCTGTTTTGCTCTGTTCATTGACTGATCACCGTTTTTGTCATTTTAGAGGGACAAGTTATAGACACAGACACCACAAACATTTTAATCAGATCTCTCCAGTTGAGCAAACAGAAAAATGAGGCAAAAGATGTAGGATCAAGGACTCCAGGAGAAAGCAGCAAGGGGAAAAGGTACATCGCTCTTATGACATCTTTACAATATTGAACCTCATTTTTGCAATGTACAATGTTCAGTTTTAGAGTTTCAATTAACAGCTTCAGATTATTTTCTTCATGACATGGTTACTTGTGAACTGAGCATGTCCCTCCTGAAACTTTTTTGATCAAATAATCCTCCCTGGAACTTGCTTCTTAATCTAGCGTTGTTTGTCATTTTCCTCACTTGATATTAAGCTATTGACGTACTGTCATTTTTATCGATCTGTTGAACAGAAATTCATCCCATCATAGTTATTGCCTGAGCAGAATGTAGTTTAGCTCTATTTTTTTGAGCAAAAACCATCTGCAGAACCTTTGTCAAATATCAATGGAAACATTGTTTTGCATGAAGGGCATCAATTTGATACAAGCTGTGGATGATTTTGGAAACTTGTTTCCCTTTAAAAAAAAATCTATGAACTAAGTAAAATCCATATCGTAGTCTCTTGGATGATACAAGTGCTAGGCTACAGTTAAAACTGTAAGATAGGCAATTATCAGATGAACTCTGAAAACATGCCTTGACCTGGGATTAACTTGGGGAATGCCCTAGTCTATTTAATTGAAGGGCGGTGTGCTACTGCCATTTGCATTACAAAAAAGTTATGCCAGACAAACCTATTGTTCTCCTATGCTTTTTTTTTTTAGATTTTGATTTGGTGCCTTTTCTGTCATTGGAATTTTTGTGCCATTTAGATTGCTTGTGATGCCAGCTAGTAGGACAAAAATCAACTCTTTTCAATTGCTGACTTGTAGAAAAGTTGTCTCCTAAAACTTCTTGCAATTGTCAGTTAAATTTTATCCTCCATGTAGCTTATGTTCCTTCTTTTTTATCAGGTCTGCTTCCAGACTTTTAGATGGCAAGAATCCATCTAAAAGAGCTAACACTGGCAGCACAGCAGGGTCATCTGCCCATGGTAACTATTTGATTCTTCTCTGCACCCTTTCTTATATGAGTAGTCATGCATAGTTTTATGAGTAATATGTGCATTGAAGGAAAAGGCTTATCAGTAATTTATTTGTTGCTGTTGTACGTTTGCAGTGTTAGGTAAATAATGTTAGTTCCTTGGAAAAGAAATTGCTGTTTTCCCTTTGTTTTCTTGGTCTTTAAATTTGGAGTTGTCAAACTTAGGTTGTGTTCTTTTGGAGGGGTTGCGAACCCCTCCCCTTCGCACGGAAAACGGAGCGATAGATTAACACGTGGTTAATTAAGTATTACCTATAAAAAACTTGAAAAATGGATTAATATGATTTTTTAAAGCAACTTTCCTATATAAACTTCATGCAAAACACGCACCGTTTAGCAGTTTGAAAAGCGTGCACGCGGAAAACGAGGGAGATGGGTTGGGAACCCATGGGAAAGAACACACCTTAGGCCGTGTTCTTTTTATGGGATGTTGTGGCTGATTAGCTGCATGCAAAATGAGAAACATAATTAGCATATGAATAATTGAGTATTAATTATTAAAAACTTGAAAAATGGATTTATTTTTTTTAAAGCATCTTCTACATAGATAGTTTCCGCACGAAACATACCATTTTTTTTTAGATGAGCGAAACATACCATTTAGTAGTTTGAAAAGTGTGTTAACGGAAATCGAGGAATAGCTAAGTTTAATCAGCTCTTTAGAACTTGCCCTTAATTTGGGTGAGAAGTTGAAGTTATTATAGGACAAATAAACTGGTACTCTACTTTGAGTGGTACTTTTCTGTAAAAAAAAATGGCACTGAGGGCATTTATGAAACTATAGCTGATGCAGATAGCAAAAATTGCGTGATTCATTGTCGCTTTGCTAACTTTTATGTTGCTATTATATGACCTATTTCCTGAATTTTCAGAAGCATTTAGACAGTTGTATACATATTTTGTTTTTATAATACGATGCAACATTTGTTTCTTTTTCTGACTACAGTGATGCTTCTGGCCAGCTTAGTTATATGAAGTAAGAAATCAATACATCTTAAATTGAAGTATCCAAGTATAAAATCCAATATGGCTACTACGTCATATATCAAAATCTTAAAATATAAATAACATTATGATAGTTTTGTTGGTAAAATTGATTAATTTGAGAAACCAATGATGTGGTTTTAATACTGAGTACTGGTAGATAATTAAAGGAACGCACTGCCAAATACCACGCAAATGTCACATAAGCTGGAGAATAACATTTGCTGTGATATTTTCCATCCAAAGGCCTCAAATGAACAATCATGCAGGCCGAACTATTTTCTTATTTCCTTCCTTTGATGTACTCCATGTAATGTGCCCATCAGCCGCTGCCCACTTCCTCCAACCCAGTGCATGGCCTGAGGATGACGTTCTAAAAAGTAGGGGCCAGATGGAAGAGAGATTGATTTCCAACTGACTGTACATTAGAGGACTAGAGAAGAAGAAATAATACAGAACAAGAAACAAACCAGGGTAGTTTTTACATTTTCAATGTTCTCCCCAAAATAGGACCCGCCGTTACTTTTGGATGGACAAAATGGACAGCAGTGGTATTTTGCAATTCACAGATTTTGCAATGGCATTTACCAGCCCAAGTTTGCAGTGGTATTTTCCAAGTTACCCTTCTTTGAGATGGCACTAGCAAATTTATTGTGTATATCCCTTTGTATATGATCTGAATAAATAGTGAAACTCAGAATAATTTCAGATGATTAAAGTCTGCTCTAACTGTGCAAGCCTAGTTTTCTTGTACCAAATTAGAATTCTGAATAACAATAAGATTCCATATGTTTTTGAAAAAGAAGATTTTGACCTATATTGTACATAGATTATTCAGTTAACACCTTTTTTTAGGTATTTTCCCTCATCATCTGAGCATCAATATTATCTTGAGAACAACATAATCCACAAAATTCTGAGCATCAATCATTTTAGTACTATTGAATATAATATCAACTTTGATCTTGCAGGGGAATTGGGATCTGTTTTTTCTGAGCAGACGCTCCAATCATTTACGGTGGAGAAGTTGCGTATTCTTCTGAAAGAGAGAGGGCTCTCACCAAAAGGCAAAAAGGTAAGTACAGAAAATGCTTAATTTTGTAACTCCCTCTTTCAGTTTTAAGAACTTGCAAAATCTTGTTTATGCCTGGGAGATTGCTAGACGTTTGATACCCAAGGGTACATTGTTCTGCTGTCTCATTTAAATCTAGAAAATTTTAATAGTACTTTAGTTTTCTAGTCATAAATTTATGACTAGTGAGTCCCAGTGTGAATATTTCTGTTGTAAATATTTTTTTCATTATATTAATAAAGCATTAACAGCAGGGGCCTCCCCTGCTGTGTTGTCTTTTTTTAAAAAAAAGGGAATCATACATGTGTGGAACACGCTGCTTAAATAAAAAATCATATGTTTGGAATTGTTGATAATCATATACCTGAATTTCAAGAAATATTCACATCTTTTTGATTGATCGACTTTAGCAATTGGAATTTCGATCTCTGGTGGCTGGTAGCCTAGCGGTGGGTCATCAGGTAGAGCAGTTTGTTATATGCTTGGGTGAGGGTGTTTGGCTTCATCAGAAGCAAGCACAATGTACTGTTGGCGACTGTTGCTGTGGTGCTGACCATTATGGTGTTGGAATTAAAGGGAAGGAACCCTCAGATTGTGGTGGGTAAGAGATGGTGGTAGTGGAATCATATCAAAGTGTGGTGCTATTGACTAGAGAAAAGTTGATGCAGGAAGGAAAAAACTGGAGATTGTGGCGGAGGGTTGGGTTTGGTTTGGCTTTGGCCAGGGATAATAAATGATGGAGCTGTAGCCTGTAGAATTAGGCCTTGTTTAGTTCCCAAAACAAAAACTTTTCACCCATCACATCAAATATTTGGACACATGCGTGGAGTATTAATTATGGACAAAAAGAAAAACCAATTACACAGTTTACGTGTAAATTGTGAGATGAATCTTTTAAGCCTAATTGCGCCATGATTTGACAATGTGGTGCTACAGTAAACATTTGCTAATGACGGATTAATTAGGCTTAATAAATTTGTCTCGCAGTTTCCTAGCAGAATCTGTAATTTGTTTTGTTATTAGACTACGTTTAATACTTCAAATGTATATCCGTATATCCGATGTGACAACCAAACCCGAAAATTTTCCCCAACTAAACAAGGCCTTAGATGGACTTGAGAGGGGTGGATTTTGCTTAGAGGGTATACAGAAGGGTAATGATTACTTGAATAGACATGGTGGAGAGGATGTTGGTTTGGGTGCGCTGACGATTGAGGATATATACTGAAGGTTTTAGATATGATGTGTGCAAACCATGCAGAAGGAGACATGACCATATTGGACAGCTTTGGTGGGCATTCAAATTTTTAATGCAATATGATATCTAATTGGCAAATGGTAATTTGTATGGTGATGAAATCACAAACACAAGTTACAGAAATGGAAATACAATTGTTTTGATGTTTTTAGGGCCACAGTTGTGTTTTCTTGACTAACTATGATTAGTGAACCTTGTAAACAAATAAACAATAGCATGAGAAACAGAACCCTCACCCCAACCATGATCAGCACTGTTTGCACCTACGGACACTGGATTTCACAGGGAAACTGGAATTTGAAATGGAGTACTTTCTTTGATGAGTAGAAAGGCATGTATTGAAAGGCTAAACACCGGCTGATAGAAGTTGTCATATATGGAGACAATAGTCTTATATTCGCTGCCCATTAAACAAAATAATACTCCCTCCATCCCAAAATATTTGACGCCGTTGACTTTTTTCAAAATGTTTGACCATTCATCTTATTCAAAAGATTTAAGTAATTATTAATTTTTTTCCTATCATTTGATTTATTGTTAAATATACTTTTATGTATACATATAGTTTTACATATTTAACAAATTTTTTTGAATAAAACGAACGGTCAAACATGTTTAAAAAAGTCAACGGCGTCAAACATTTAGGGAAGGAGGTAGTATGAAGGATATCACACGTTCGAAGGGTTGTTCACTTTACTGTCTATCTTTTGAACATTTAGTTATGAACCAAAAAAGAATAGCACTCATTTATTTTGAGATCACTCATCTAATTCCTTTTCTTGCTAAATCAAACTTTTGTCCCTTGTTGCAGGATGAACTGATCGCCCGCTTAATTGAGTCCTCGGAGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA036247