BGIOSGA036346

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Revision as of 08:20, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA036346| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA036346, complete gene.| tag = OsI_380...")
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Gene Name

BGIOSGA036346

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA036346, complete gene.

LocusTag

OsI_38031

Ensembl Transcript ID

BGIOSGA036346-TA

Ensembl Protein ID

BGIOSGA036346-PA

Length

3496

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:8939232..8942727

Sequence Coding Region

8942101..8942727,8941912..8942064),complement(8939232..8939531

Genome Context

<gbrowseImage1> name=IndicaChromosome12:8939232..8942727 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:8939232..8942727 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGTCCACTCAGAGCAACGAGCGCGGGGCTTGCTTGCTCGATGCTCAGCTCGAGCTCTACGTGAACACCTTGGCCGTCATCAAATCCGTGGCCCTCAAGGCCGCCATGGACCTCGGCATCGCCGACGCCATCCACCACCACGGCGGCGCCGCCACCCTGCCCCAAATAGTCACCAGGGTCACCTCGCTGCACCCCTCCAAGATCCCGTGCCTGCGCCGCCTGATGCGCGTGCTCACCCTCACCGGCGTCTTCGCCGTCGAGACGACGGAGCCGGTAGACGGCGCGGCGGCCGACGAGCTGCCGGCCGCCGTCTACGCGCTCACGCCGGCGTCCCGCCTCCTCCTCGTCGGCTCCGGGAACCACCACCAGCAGGCGTCGCTCATGTCAATGCTGCTCCACCCGAGCTTCATCGCCTCCTTCGTCCGGATCAGCGACTGGCTCCAGCGCGAGCTGCCGGGCCCGTGCATCTTCGAGCACACCCATGGCCGGAGCATGTGGGAGATGGCCGACGACGACTCGGCCTTCAACAAGGTCGTCAACAATGGGATGGTCTCCGACAGCCGCCTGGTGATGGACGTCGTCGTCAGGGAGCACGGCGAGGTGTTCCGCGGGATCAGCTCACTGGCCATCGCCGAGGCGTTCCCGGAGGTGAGATGCACCGTGCTGGACCTCCCCCACGTCGTCGCCGGGGCTCCCGTTGGCGCCGGCCCCGGCGTGGAGTACGTCGCCGGCGACATGTTCGAGAGCGTCCCACCGGCAAACGCTGTCTTCCTCAAGTGGATTATGCATGACTGGGGCGATGATGAATGTGTCAAGATACTAAAGAACTGCAAGAAAGCCATTCCATCTAGAGATGCTGGAGGAAAGGTAATAGTCGTAGACATGGTGGTCGGAGTAGGGCCACCTGATCAAAAGCATTTAGAGATGCAGACCTTGTTTGATGCATACATCATGCTTATCAATGGTGTGGAGCGAGACGAGCAAGAGTGGAAGAAGGTTTTCGTCGAAGCCGGGTTTAGTGACTACAAGATCATGCCAGTTCGAGGCTCCAGGTCAATCATTAAGGTTTACCCTTAA</cdnaseq>

Protein Sequence

<aaseq>MASTQSNERGACLLDAQLELYVNTLAVIKSVALKAAMDLGIADAIHHHGGAATLPQIVTRVTSLHPSKIPCLRRLMRVLTLTGVFAVETTEPVDGAAADELPAAVYALTPASRLLLVGSGNHHQQASLMSMLLHPSFIASFVRISDWLQRELPGPCIFEHTHGRSMWEMADDDSAFNKVVNNGMVSDSRLVMDVVVREHGEVFRGISSLAIAEAFPEVRCTVLDLPHVVAGAPVGAGPGVEYVAGDMFESVPPANAVFLKWIMHDWGDDECVKILKNCKKAIPSRDAGGKVIVVDMVVGVGPPDQKHLEMQTLFDAYIMLINGVERDEQEWKKVFVEAGFSDYKIMPVRGSRSIIKVYP</aaseq>

Gene Sequence

<dnaseqindica>1..627#664..816#3197..3496#ATGGCGTCCACTCAGAGCAACGAGCGCGGGGCTTGCTTGCTCGATGCTCAGCTCGAGCTCTACGTGAACACCTTGGCCGTCATCAAATCCGTGGCCCTCAAGGCCGCCATGGACCTCGGCATCGCCGACGCCATCCACCACCACGGCGGCGCCGCCACCCTGCCCCAAATAGTCACCAGGGTCACCTCGCTGCACCCCTCCAAGATCCCGTGCCTGCGCCGCCTGATGCGCGTGCTCACCCTCACCGGCGTCTTCGCCGTCGAGACGACGGAGCCGGTAGACGGCGCGGCGGCCGACGAGCTGCCGGCCGCCGTCTACGCGCTCACGCCGGCGTCCCGCCTCCTCCTCGTCGGCTCCGGGAACCACCACCAGCAGGCGTCGCTCATGTCAATGCTGCTCCACCCGAGCTTCATCGCCTCCTTCGTCCGGATCAGCGACTGGCTCCAGCGCGAGCTGCCGGGCCCGTGCATCTTCGAGCACACCCATGGCCGGAGCATGTGGGAGATGGCCGACGACGACTCGGCCTTCAACAAGGTCGTCAACAATGGGATGGTCTCCGACAGCCGCCTGGTGATGGACGTCGTCGTCAGGGAGCACGGCGAGGTGTTCCGCGGGATCAGCTCACTGGTGGATGTCGCCGGGGGCCACGGCACGGCGGCGTAGGCCATCGCCGAGGCGTTCCCGGAGGTGAGATGCACCGTGCTGGACCTCCCCCACGTCGTCGCCGGGGCTCCCGTTGGCGCCGGCCCCGGCGTGGAGTACGTCGCCGGCGACATGTTCGAGAGCGTCCCACCGGCAAACGCTGTCTTCCTCAAGGTATAATGTTAATGGCGTCCTAATTCTCACTCTCAACTGTTACGTTTTGTTCTGATCTTGTTGTCACGTGCTATGCATGGAGTTGGCGTAACATGCATGCATGTCAAATGGCAATTGAATTAGCCGAGCCACTTACTTCTGCCTTACTATTTGACGACAACAGGGGTGGACAGAAAGCTCGTGGCTCGTTAGCTGGCTCGGCTCGTGACAGGCTCGGCTTGGTTCGGCTCTTTTGAATTTTCTAATGAGTCGAGCTGGCATTTTAGCCGCTGGGAGATCAAGTGCCCGCCGCCGCCTGTCTCTGCCTCTCCCCCGCCAGCGCCCGCCGCCGACGGGAGATCGAGCGCCAACCGCCGCCGGTCTCCGCCTATCCCCCAACGCCTGCCGCCGCCGGGAGATCGAGCGCCCAACGCCGCTGATCTCCACCTCTCCCCCAGCGATCCAGCGCCCGCTGCCGCCGGCGCTCGCCCCCAGCACCCGACGCTGCCGGCGAGCTCGAGCTCGTCTCCTCCAAGTGCCGGCGAAGCTGCGTCGAGTTCATCCCCTCCACCGTCGAGCTCCTCCCTGTGGTCGCCGGTGAGCTCGAGCTATTTTCCTCCGCCGTCAAGCTCCTCCCCTCCTCCCCGTGCTTGCCGGCTACGTCTCTTGCCGCTAGCTTGCGAGCTTAACGAGCTGGCTCAAGCTTGTTGACGAGCCGAGCCGAGCTAGGTTTCTAGCTCGGCTCGGCTTGTTATCCTAACGAGCCAGACCAAGCCGAGCTGAGCTAGCTCGACATCCACCCCTAACGACAACATAGTATTTGCTATCATCATAACAATAATTAGTCAAAAATACGATCACTCGTATCGAGTAGTAAACATGATCCACAATAATATAGATAAGCTACATGTTAGCATAAAAATAGTACGTACTACTGCAATCTGCATATAAGAATGGAGATGAATTTATATACATCATTGTCACTGTCTAGAGACTGAATCGAACCAAACGCGCCCAGAGGCCATAATAATACGTGGCAAAAGTATCCCACAGTCAAAGTTTAACTTCGATATGATCACAAGACAAAATCATGTCTTAGTGCCGTTTAACGAACTAAGATTATTTCAGTAGCTCTAAATCATGCCATGCAGGTAGGTAATAAATATTTACTTCCGTACTGCACTAGTAATAATATTAATAATATTTTTACTAGCAATACAGTTATACAATAAACACTGGGCGTGCTATATATATATAGTAGTCTTACAGACGATTATACCATGTATTTGTGTTCATGTAGCTCTTTTTATAAGCTGTTAGGAAAAAAATGTTCACAGTTTAATGAATATAGAAATTACAAGTATACCACTACTGGAGAAACCATAGCCAAAATCAACAATAGTCCCGGTTCAACTAAAAACCGTTTAGTCCTGATTTAAAAGTGCAAGGGGACTATGATGTTTAGTGTTGGATGGCAAATCTTTAGTCCCGGTTCTATTTGTGTCCGACGATGTCAGGGCGCCGAGGATATTTAGAGATAACTAGAGACTTGACTTCCTCATCCGACTTAGATTTCCTCATCATCTTCTCTCGCTGAGATTTTTAGTCCCGAGACCAGATCGAGATCTCCATTCTCCATGCCTCTTCTCTCGCCGTCTCTCTTACTCTCTCTCTCTCGCTCTCTCGCAACAGCTCGATAGGAGAAGCGGTGGCGGCCGCACTGGGAAGACGCCGGGAGAAGCGGCGGCGACCGCCGGGCGGGGGCTGCGGCGGCCAGGCTGGGGACTAAAGATGGGTACCTTTAATCCCGGATTCGTGGTCCCGGTTATATAACCGGGACTACATATGGGGGTAATAAACCGGGATTAAAAACACTTTCTCCAGCAGAGTACCTTCAATCTATTCTACTACTCTACCTCCCCATCATGTTGGACTGTACAAAAATAATTTATATAATTCAAGATAAAAATTGCTAAGCACCGTGCTACTTGTTGTGGACTCTCAATTAGTATCCTTGTTAATGAATAACCAATTTTAATTGCCAAATCGTGTCTATCACGACTCATTATTAATCTTAGTTATTATTTATAACTAATTTCATAAATCGAAGTTAACAATTACAAAGCATGACTCAGCTTGGAGGGCCAATTTTATTGCTTCAATTACGTAATTTTTCTAGAAAAATCGAAATAACATAAATATGAAGTCATTCCGGTCTTATATTCTGAATTTAATTATTGTATTAATTTGATCATACCGAAAATTCGAGATCAGTAATTGACAGTTTGTAATTAGTATGGTGTTTTTTTTAACCTAAGCCATAATTTGTAATTTCTAAATAGTACAGAATGTTATTTATTTACCTCGTGACTCTCTCATTATGTTTGCTATATATTTTCAGTGGATTATGCATGACTGGGGCGATGATGAATGTGTCAAGATACTAAAGAACTGCAAGAAAGCCATTCCATCTAGAGATGCTGGAGGAAAGGTAATAGTCGTAGACATGGTGGTCGGAGTAGGGCCACCTGATCAAAAGCATTTAGAGATGCAGACCTTGTTTGATGCATACATCATGCTTATCAATGGTGTGGAGCGAGACGAGCAAGAGTGGAAGAAGGTTTTCGTCGAAGCCGGGTTTAGTGACTACAAGATCATGCCAGTTCGAGGCTCCAGGTCAATCATTAAGGTTTACCCTTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA036346