BGIOSGA036474

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Revision as of 08:22, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA036474| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA036474, complete gene.| tag = OsI_377...")
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Gene Name

BGIOSGA036474

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA036474, complete gene.

LocusTag

OsI_37773

Ensembl Transcript ID

BGIOSGA036474-TA

Ensembl Protein ID

BGIOSGA036474-PA

Length

4880

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:5263603..5268482

Sequence Coding Region

5268407..5268482,5266459..5267429),complement(5264975..5265263,5264409..5264653),complement(5263974..5264131
,5263603..5263822

Genome Context

<gbrowseImage1> name=IndicaChromosome12:5263603..5268482 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:5263603..5268482 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCCGGCGATCGCCGCGGCGGCGGCGGCGGCGGGCGTCCTGGCTCCGGCAGCAGCAGCAACGGCGGAGGCTCCGGGTATAGTTGGGTTCAGAAGAAGTCGAAGAAATCGGAGAAATCAGTTGGGAAGGGACAATGCACACCATGTACTTCTTCAAATGCTGCACCTAAACCTGCTACAGCGTGGCAAGCACGGAGTGGCAATGGATCTTTACACCCTCCTGAAAATGGTCGGGTTCAACATTCTGATCATAGGCCTGCTGCCAGAGGCAGTCCTAGGTCACTGCCACAAAATAAGCATACAGAAACAAAATTGCAAGCACCGTGTCCAGTTATGACTGCACCTCTTGCAAATGGCTTGCAGTGGGTACCCAAGTCTCGCTCATCTAGCTCTGAGAGGGATGATGCCCCTACATCTGGTTCTGACCCTGAAATGGACAATGGTGCACCCTGCCCAGTTGTAACTGCACCTGTTGCAAATGGCTTGCAGTGGGTACCCAGATCTCACTCATCTGGCTCTGAAAGCAATAAGAATGATGCTCCTACATCTGGTTCTGACCCTGAAATGGACAATGGTGAAGATTATGATTCATATGACGATGATTCTGATGATGATATGGTTGATGATACCAGTGGTGACTTTGATTCTAAGGCAGCTGAGAAAAATTTTGAGACTCGAAAAAGGCACAAGCTGTTGAAAAGCATTTTTGAACTTCTGGAGAAGTTAAGTGTTGAACAGATAAATGAAAAGACTAGGCAATGGCATTGTCCAGCATGCAAAAATGTACGTGGTGGTGTTACCTGGTACAAAGGGTTACAGCCTTTGATGAATCATGCTAGAACAAAGGGTTCTAAGAGGGTTAAGCTTCACAGAGAATTGGCTGCATTACTGGAAGAGGAGCTGTATCGTACGGGAGTTTCAATGGCACCATCTGGCGAGTTCTTTGGAATCTGGAAAGGATTGCGAGAAAACACTGATCGTCCTATAGTATGGCCCCCAGTGGTTATTATTATGAACACTCGATTGGAACAAGATAAGGATGGCAAGTGGAAAGGTATGGGAAACCAAGAGCTCCTTAGTTATTTCAGTAAATATCACGTGAAGGAAGCATGCCATGCTTATGGCCCAGATGGGCACAGTGGCATGAGTGCGCTAATATTTGAAGGATCTGCCGTGGCCTATAAGGAGGCAGAACGGTTGCATAATCACTTTGTTGATCAAAGAACAGAGAGGTATGCGTGGTTGAATCATAGGATCGTCATACCTGGTGGGAAAAGGCAACTGTATGGTTTCTTAGCTGAAAAAGAAGATCTGGAGGCGTTCAATAGACATCATGGAACAGACTATCTGAAATACGAGATGAAATCTTATAATGACATGGTGGTTACCCAATTGAAGCAGATGAGTGAAGACAACCAACAACTGAATTATGTGAAGAATGAGATGGTTAAGACAGAGCGACATTCTAAAGAAGTAGAAGAAGCCTTGGGTGTTGAGACCCAGAAACTTCAGGGAGCAATTGAAGATAATATTATTTTGAAGAGAAAAACCAAGGAGATGCTCTCAGAGTGCGTGGAACAGATGGAGTTTAATGCGAAATTTTATCATGAACAAATTGAAAGACTTCGCAAGGACACCGAGGAGAAAGAAAATGAGTTTGAGAGGTTGCTGCAGGAGGAGCTAGCAAGAGCTATAGAGTGTGATGTTGACTCTGAAACTACAGAAAATTGCAGTCTAAGGGAGGAACAGATACAAAGAATCATAGATTGCCAGGTGAAGGATGCGGAGGAGTTTGATGCTGAACAAGATGAATTGATCAAAGCACACGAAGAGAAGAAGGCGAACGTCAAGATGGAGTATATGGCAAAGGATGTTGAGCTCGAGGAGGAGCTTTATGCCGCTCTCACAAGTCTGATGGAGAAACACAAGCCGGACATCTTCCAACCGTCCAGCCCTTGA</cdnaseq>

Protein Sequence

<aaseq>MPGDRRGGGGGGRPGSGSSSNGGGSGYSWVQKKSKKSEKSVGKGQCTPCTSSNAAPKPATAWQARSGNGSLHPPENGRVQHSDHRPAARGSPRSLPQNKHTETKLQAPCPVMTAPLANGLQWVPKSRSSSSERDDAPTSGSDPEMDNGAPCPVVTAPVANGLQWVPRSHSSGSESNKNDAPTSGSDPEMDNGEDYDSYDDDSDDDMVDDTSGDFDSKAAEKNFETRKRHKLLKSIFELLEKLSVEQINEKTRQWHCPACKNVRGGVTWYKGLQPLMNHARTKGSKRVKLHRELAALLEEELYRTGVSMAPSGEFFGIWKGLRENTDRPIVWPPVVIIMNTRLEQDKDGKWKGMGNQELLSYFSKYHVKEACHAYGPDGHSGMSALIFEGSAVAYKEAERLHNHFVDQRTERYAWLNHRIVIPGGKRQLYGFLAEKEDLEAFNRHHGTDYLKYEMKSYNDMVVTQLKQMSEDNQQLNYVKNEMVKTERHSKEVEEALGVETQKLQGAIEDNIILKRKTKEMLSECVEQMEFNAKFYHEQIERLRKDTEEKENEFERLLQEELARAIECDVDSETTENCSLREEQIQRIIDCQVKDAEEFDAEQDELIKAHEEKKANVKMEYMAKDVELEEELYAALTSLMEKHKPDIFQPSSP</aaseq>

Gene Sequence

<dnaseqindica>1..76#1054..2024#3220..3508#3830..4074#4352..4509#4661..4880#ATGCCCGGCGATCGCCGCGGCGGCGGCGGCGGCGGGCGTCCTGGCTCCGGCAGCAGCAGCAACGGCGGAGGCTCCGGTGAGCACCCTTCCCCCGCGCGCTCGCGCCTGCGCCACCCTCTCCGCCGGTAGGATTCAGGGCGGTGGCCTCGTCGTAGGCATGCGCGTGTATATGTTTTTTTTTTTATATTCCCGTAGATTTTGTGCTGTGCATGGCCTTCTCCGATCCCCAGTTTCCTGGGCCTCTTTGATGAGACTATGGTTTACTGCATTGCATTCTGCTCCGTCACTCCGTCAGTAGGAAGTAGTAGTAGTACTAAGCATTATCCGGGAAGAAAAAAAAAGAAAGTGGCAAAGCTTTTGCCCTTCCTTTAGAAAAAAATATATTTTTGATTAGATATATAAAATCGATCAGCTTAGGTTCATCTTGGATCTCATATTTTGCTAGGAGGTATGGTAAGAAATTTTAGTATTTTACCACACTTGATAAATATATCGCTGTACTTAGGTGGTGTTGGGATCCGGGACTAAACTTTAGTCCCTGTCACATCGGATGTTTAGACACTAATTTGGTATATTAAACATGGACTACTTACAAAACTAATTGCATAAATGAGAGCGAATTCACGAGACAAATTTTTTAAGCCTAGTTAATCCATAATTAGCACATGTTTACGGTAGCATCACATAGGCTAATCATGGATTAATTAGGCTCAATAGATTTGTCTCGCGAATTAGTCCAGGGTTATGGAATGGGTCTTGTCATTAGTCTACGTTTAATACTTCTAATTAGTGTCCCAACATCCGATGTGACAGGGACTAAAGTTTAGTCCCTGGATCCAAACAGGCCCTTACTTACTCATTAGTAACAAACCTTGAGGTTGAAGACTGTATGATGTTAAGTATGTGAGTTATGATTTGATAAGAAGTATGCTAAGTAGCAAACATGAGAAGTTGGTTGCATGCTCCACAGTACAATTTTTAGTTGTTCCTTTGTCATACATTGACACGCATAGAAAAATATCATATTACTTTATCTAACTGTTTTTTGTGTAGGGTATAGTTGGGTTCAGAAGAAGTCGAAGAAATCGGAGAAATCAGTTGGGAAGGGACAATGCACACCATGTACTTCTTCAAATGCTGCACCTAAACCTGCTACAGCGTGGCAAGCACGGAGTGGCAATGGATCTTTACACCCTCCTGAAAATGGTCGGGTTCAACATTCTGATCATAGGCCTGCTGCCAGAGGCAGTCCTAGGTCACTGCCACAAAATAAGCATACAGAAACAAAATTGCAAGCACCGTGTCCAGTTATGACTGCACCTCTTGCAAATGGCTTGCAGTGGGTACCCAAGTCTCGCTCATCTAGCTCTGAGAGGGATGATGCCCCTACATCTGGTTCTGACCCTGAAATGGACAATGGTGCACCCTGCCCAGTTGTAACTGCACCTGTTGCAAATGGCTTGCAGTGGGTACCCAGATCTCACTCATCTGGCTCTGAAAGCAATAAGAATGATGCTCCTACATCTGGTTCTGACCCTGAAATGGACAATGGTGAAGATTATGATTCATATGACGATGATTCTGATGATGATATGGTTGATGATACCAGTGGTGACTTTGATTCTAAGGCAGCTGAGAAAAATTTTGAGACTCGAAAAAGGCACAAGCTGTTGAAAAGCATTTTTGAACTTCTGGAGAAGTTAAGTGTTGAACAGATAAATGAAAAGACTAGGCAATGGCATTGTCCAGCATGCAAAAATGTACGTGGTGGTGTTACCTGGTACAAAGGGTTACAGCCTTTGATGAATCATGCTAGAACAAAGGGTTCTAAGAGGGTTAAGCTTCACAGAGAATTGGCTGCATTACTGGAAGAGGAGCTGTATCGTACGGGAGTTTCAATGGCACCATCTGGCGAGTTCTTTGGAATCTGGAAAGGATTGCGAGAAAACACTGATCGTCCTATAGTATGGCCCCCAGTGGTTATTATTATGAACACTCGATTGGAACAAGATAAGGATGGCAAGGTAGTGTTTTCTATTTCTTGCTCGAGCTAAAAAATATTTTGCTTTTCTATATCATTTTCTGTTGCATTGTATCTGGAAGTTTTTTTTTGTCCAATTGTAAGTCACGTTGTTTATTTACTGACTGTGGTGTTGTATTAGGTCGCAATATTTATTTCTTCGAATGTTATTGAATTTTGAGTAAATTTCATAAACCCCACCTGTTATGGTCCAAGTTACATAAAACCATAGGGATTTTGACACGTGGCACATAATCCTGATGGTCATAAAGTTTCACAAAACCACACTGTTAGCCATTTTGACATACTCCTATATCAAAATTTTTAAAAGTGGATGTAACATTTATATGATGGATAGAATCCTCATAAATTTGAGATATGATTGTAAAACTCAAAAGTGTTGTAGATCAAAATCAAAATGATCGATAGTGTGGTTTTGTGAAACTTTAGGACCATAATTCCTGTGGTTATATGCCACATGCCAAAATCTCTATGGTTTTGTGCAACTTGTACCATAATAGGTGGGGTTTTATGAAATTTACTCTTGAATTTTAGTTATGGGTAATGCACATGGATTCTACTAAACCTAAATTGTACACATAACTTTATGGCTGTCCACTATTCTTTCTGTAATATCTGATCTAATCAGTTGTACTCAATGTGTAGAAAAATTAAAGAAATAAGACTGATTTGTTTTCATATGGTTCTATTGAATTTTTTTTATCTATTACTACGTATCATTAAATAAAATGTAAATGCATCCTTCAGGAGCAGTTAAGATGGCAAATGTGATGGTTTCCATTACTTAAATATCAGATAGCTGTCATATGCATTGCAATATCGATCCATGGACACGGTTTATCTCCATTACCAGTTTATTTTGTTTATCATTTTTATGTTAGTTATTATTTTATGTGCCAGCAAACATTTTTCTTGCAAGGTTTAAAATATTTACAATATTCAAATAACATAAAACTGCAAGAAAACATATTGTAGTTATTCTTTATTATGTTTTGCTTGCATTCATACTCCACTGCAAAGAAACATAAATATGGCTACTAATTAGGATTGTCTAGGCATACTTGGCCCAACCAGTTGAAGGTCATTGTTCAAAAACATCCATTTGATCTATCTTTTAAGCTGTATGAAGCTAAGATTTACTTCATTCTAATTTATATTTCTCCCTTGACTTGTTCCAGTGGAAAGGTATGGGAAACCAAGAGCTCCTTAGTTATTTCAGTAAATATCACGTGAAGGAAGCATGCCATGCTTATGGCCCAGATGGGCACAGTGGCATGAGTGCGCTAATATTTGAAGGATCTGCCGTGGCCTATAAGGAGGCAGAACGGTTGCATAATCACTTTGTTGATCAAAGAACAGAGAGGTATGCGTGGTTGAATCATAGGATCGTCATACCTGGTGGGAAAAGGCAACTGTATGGTTTCTTAGCTGAAAAAGAAGATCTGGAGGCGTTCAATAGACATCATGGTATAATGTTTAACTTCTTTTCATATATAATGCTCTGAACTCTGTGCAATTGTATGTGTTTGTTGTCTTTTGTTATAAACTTTTAAAATGGAAACATGATCCATACATGTTCGCATGTTTGAAAGGTGAACATTATAAAATATCATTTTGGAACCTTTTATTGTACATGAGAGTTGGTGTATTGTCAGAACGCAATGCATCACCTGTATGACTGTGTATTCATCTAATTTCCTGGTTTTCCTGACAGATTAGCTTTGCTGTTGCATGTCAATTTCAACATAAATTCAGACTATTTTTTTAAAAAAAATGTATGATTTTCAGGAACAGACTATCTGAAATACGAGATGAAATCTTATAATGACATGGTGGTTACCCAATTGAAGCAGATGAGTGAAGACAACCAACAACTGAATTATGTGAAGAATGAGATGGTTAAGACAGAGCGACATTCTAAAGAAGTAGAAGAAGCCTTGGGTGTTGAGACCCAGAAACTTCAGGGAGCAATTGAAGATAATATTATTTTGAAGAGAAAAACCAAGGAGATGCTCTCAGAGTGCGTGGAACAGGTATTGATTGCTTAATAGTTACCCTGGTGAACATATTTTCTGCTAACACATGTATGATCTGCAACCAGAAGTAACATAACTACAAAATCTGCTTGGACACTGCCTCCTAAAATCTTAATACAAAGATACGCATCGCTCTTACGTATTCCTGAAAAAAATCTGCTTGGACAGGCAGTCTTCTGCAATTAAAACGTTTGCCATAGAATCCCTTTTGCTTTGTCTCATGTTAACCTTGTTTTGATTTTGTCTCCTTTCCTCACCTTATGGCTCTATGCAGATGGAGTTTAATGCGAAATTTTATCATGAACAAATTGAAAGACTTCGCAAGGACACCGAGGAGAAAGAAAATGAGTTTGAGAGGTTGCTGCAGGAGGAGCTAGCAAGAGCTATAGAGTGTGATGTTGACTCTGAAACTACAGAAAATTGCAGTCTAAGGTGTGACCAATACGTGGTTGGGACTTGGGAGCAGTTGAAAATTTGATAGTACTTCTGATTATTCTTCTATTGATCAAATATAGATATGGTGTCTCTGTGAATGGAAATGCTCCACTCCGATATATCACTAATCCAAAAATATTTTGTGCAGGGAGGAACAGATACAAAGAATCATAGATTGCCAGGTGAAGGATGCGGAGGAGTTTGATGCTGAACAAGATGAATTGATCAAAGCACACGAAGAGAAGAAGGCGAACGTCAAGATGGAGTATATGGCAAAGGATGTTGAGCTCGAGGAGGAGCTTTATGCCGCTCTCACAAGTCTGATGGAGAAACACAAGCCGGACATCTTCCAACCGTCCAGCCCTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA036474