BGIOSGA036526

From RiceWiki
Revision as of 08:23, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA036526| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA036526, complete gene.| tag = OS12G01...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA036526

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA036526, complete gene.

LocusTag

OS12G0179800

Ensembl Transcript ID

BGIOSGA036526-TA

Ensembl Protein ID

BGIOSGA036526-PA

Length

4188

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:4338718..4342905

Sequence Coding Region

4342867..4342905,4341975..4342017),complement(4341638..4341887,4341488..4341553),complement(4341365..4341410
,4340310..4340470),complement(4340091..4340220,4339608..4339772),complement(4339074..4339201
,4338862..4338961),complement(4338718..4338771

Genome Context

<gbrowseImage1> name=IndicaChromosome12:4338718..4342905 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:4338718..4342905 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCGGGGGCGCACGCGTCGCGCGCTTCGGCTCCGATCATTGCAGGTCTCACAGGTGCTCTTCGAGCAGCATATAAAGGATTTTCTCCTCAGTTATGCAACTTCCATGCGTCAGTAAATAATGGACTTCTCCACAGAAGGAAAATACAACTCCATTTTATATGCTCTTTTCGCTCCATACAAGCAAGATATAACCATTCGTCAGCTGTTGCACCTAAGGACTATTGCGAAACTTACATCCAGTTTCTAAGAGATAAACAGATAGTTCCTGATTCAGATCCTCCAAGTGCTAAGGATGTGGACCTACTTTACCGGTTTATTGATCAGAGTAAAAAACTCATGGTGTTAACTGGAGCAGGAATGAGCACTGAATCAGGAATTCCTGATTATAGGAGCCCTAATGGTGCTTACAGTTCTGGTTTTAAACCACTTACTCATCAGGAGTTTGTTCGTTCTATTCGAGCCCGAAGGCGGTACTGGGCTAGGAGCTATGCTGGATGGAGAAGGTTCAGGAGAGCACAACCAAACTCAGCCCATTATGCTCTTGCATCACTGGAGAGAATTGGCCGGGTACACTCAATGGTTACTCAAAACGTGGATAGGTTGCATCATCATGCTGGGAGTAAGCCAGTTGAATTGCATGGAAGTGTGTATGAGGTAGCATGTTTAGACTGTGGTACATCCATTGACCGAGAATCATTCCAGGAGCAGGTCAAGGACCTCAACCCAAAGTGGGCTCTAGCTATTGACAGTTTGGAAGTAGGACAACCGGGCTCAGACAAAAGTTTCGGAATGCAGCAGCGACCTGATGGTGATATTGAGATTGATGAGAAGTTCTGGGAGCAAGATTTTGATATTCCTAGTTGCAACCAATGTGGTGGAGTGCTGAAACCTGATGTTGTGATGTTTGGTGATAATGTTCCTGAAGAGAGAGCTGAAAGCACTAAGGAGGCTGCAAGAAATTGTGATGCTCTTCTAGTGGTTGGTTCAGCACTAATGACAATGTCTGCTTTTAGGCTCGCAAGGCTTGCACATGAAGCGAATGCTCCAATTGCAGCGATCACCATTGGTGAGACCAGGGCTGATAGTATTTTGTCCTTGAAAATTAATGCAAGATGTGGGGAGATACTGCCCAGAATACTTCAGATGGGAAGTCTATCTGTACCAAATGTGAGTTAA</cdnaseq>

Protein Sequence

<aaseq>MAAGAHASRASAPIIAGLTGALRAAYKGFSPQLCNFHASVNNGLLHRRKIQLHFICSFRSIQARYNHSSAVAPKDYCETYIQFLRDKQIVPDSDPPSAKDVDLLYRFIDQSKKLMVLTGAGMSTESGIPDYRSPNGAYSSGFKPLTHQEFVRSIRARRRYWARSYAGWRRFRRAQPNSAHYALASLERIGRVHSMVTQNVDRLHHHAGSKPVELHGSVYEVACLDCGTSIDRESFQEQVKDLNPKWALAIDSLEVGQPGSDKSFGMQQRPDGDIEIDEKFWEQDFDIPSCNQCGGVLKPDVVMFGDNVPEERAESTKEAARNCDALLVVGSALMTMSAFRLARLAHEANAPIAAITIGETRADSILSLKINARCGEILPRILQMGSLSVPNVS</aaseq>

Gene Sequence

<dnaseqindica>1..39#889..931#1019..1268#1353..1418#1496..1541#2436..2596#2686..2815#3134..3298#3705..3832#3945..4044#4135..4188#ATGGCGGCGGGGGCGCACGCGTCGCGCGCTTCGGCTCCGGTAACAATTTCTCGCCATTTTTTTTCTCGTTCTCCCTCGATCGAAACTGGCCTTTTTTTTTCTCAACGTCATTATGTGGTTTAGTGGATCGGGATTTGATGGGCCTTGACTCAATCGATGGCTCCCAAGATTTTCTGGGCACGATTTTGGAAGGCGGTTCATGCCGTGGCAGTTTGGAATTTGGTGGTTCAGGAATTAGGACTCAACTGAGAACCTGGAGTAGGCATTTCCAATAGCTGTTGCTTTGTTCCTTTGTGAAATTAGTTACGTAAATGTTTCGTTCAGCTGAGGTGCAATCACTGAATCACTGAAGTTCATAGTTCAGTGAATGTTCTATATGGCATTGTTATGGAAAAGGAATTTAGTCCTTCCTAATGGCTAATGATGGAGCTACTGAACTAGCATGCTAGCTTCATTATAACATGTAGGAGTACAATTTGTATGCCTGTTCCAAAGCTCCGTAATTTTGCTATGATAATCCTGTCTACTGTGAACCAACCTAGACAGTTTCTTGTGGTACTTGCGATATTGGCTCACACAGGCTACACAGCAGATTTTTAGGACCTCTACAACACCATGCTACTCGCTATATTATGATTTATACCAGAATTTCTGTTCCATCTAAACAGTTTGCATAACATTTAAACAGGCCATGAGTTAGTTTGGAAATATAAATTATGGGTAATTCTTTTACTGTCGTAATTCAAGTTTCTTGGAATAATTTCCAAATTATGATCGCTTTCTTGGTCATTGACTATGCAATTAAGTTTATTCTATTTATATGCATCTTTCTTATTGGCACTATTGAGGCTTATGGAACAACCAACTTACCTGTGTAATGGAATTCAGATCATTGCAGGTCTCACAGGTGCTCTTCGAGCAGCATATAAAGGCAAGTTGTCTGAGAAGAACTGTTTTTCTGGCATGATTTAACAATTCCTAATTTTCCACTAACTAGTTGAAACCAGTCACTTATCAGGATTTTCTCCTCAGTTATGCAACTTCCATGCGTCAGTAAATAATGGACTTCTCCACAGAAGGAAAATACAACTCCATTTTATATGCTCTTTTCGCTCCATACAAGCAAGATATAACCATTCGTCAGCTGTTGCACCTAAGGACTATTGCGAAACTTACATCCAGTTTCTAAGAGATAAACAGATAGTTCCTGATTCAGATCCTCCAAGTGCTAAGGATGTGGACCTACTTTACCGGTTTATTGATCAGAGGTAGGAATCTGCCCTTGAACATTTTTCAACATTTTTTGCTATGTTTCAAGTGAGATTAACTTTGCTATCTTCTACTTGCTTCAGTAAAAAACTCATGGTGTTAACTGGAGCAGGAATGAGCACTGAATCAGGAATTCCTGATTATAGGAGGTACACTTAACCCAGTTGCCAGACTTGCCATGTTTCTATGTACTATTCTAACATGCAGAATTTTTGTTTGGTGGCAGCCCTAATGGTGCTTACAGTTCTGGTTTTAAACCACTTACTCATCAGGTGTGACCCTACTTCTGCTTGTCAAATGACAACTATTATCATGCTTTTTTTACTTCTCTGTGTCAAATGATAACTATTATCATGCTTTTTTACTTCTCTGACAGAGGTGCATGGAGATTTTTCTCTCATTATGGAGCTATTTTAAACTCATATGTCCTAAGTCAGTGTTTTTTCTAAAAAAATTTCATTCCTAAGACTAACAAAGTTGTGCACTCTCTGTTTCTTGACATATATTATCCATGTGAAAAGCTCATAAAAAATGCTACTTACATTAGTCATTTTTTCTTTACATCAAGAGCTTTTTTAAAATAAGTTCAGACTGTTATATTTTTATTCATTTTTTCTGAGCAGAACTTATCTGGATACTTTACTGAAATGCTGATTTAAAAATGATTTTGGCAGGCGATTTAAAAATAATTCACATGGAGAAACCATTGAAAACAAAAAAAATATCTATCATTAAGGAACATTGATGGACCTACTAGAACTTTTAATCCTCTGGCATGCTTTAATCTTTAATGTAATTATTTTTTTGACAATTGTTTTGTGGTTTTTGCAATTTTATGTTGTATTTCGTTCATGAATGCTTATATCAACTTCTCCAGAGCTTGACAAAATTCGGTTCAGATTATGATTCACCTAAAGAACAGTAAAGAAACCTTTTACCGTTAAGGAACACTTATCAGATCTATATAGGTCTCAATTTTTTCTGGCATGAACCTTAATTTGAGATGTCATTGAATCGTACTATATGATTTTCTGATAGTAAACTTAGTTTCTGCAACATATGTACCAATATTCAGTAGGAAATCATGCTAGTAGCCCCTAATGCTCTCCTCATTTGTCCAAATCAGCTTACCAGTGATTACACCCTTCCAACTTTACTATTTGTAGGAGTTTGTTCGTTCTATTCGAGCCCGAAGGCGGTACTGGGCTAGGAGCTATGCTGGATGGAGAAGGTTCAGGAGAGCACAACCAAACTCAGCCCATTATGCTCTTGCATCACTGGAGAGAATTGGCCGGGTACACTCAATGGTTACTCAAAACGTGGATAGGTAATGGGCTGGATCTATGTCATTGCGGCGTAGTTGAGAATGATAATGTTATTTATTTCTCACCTTCACTTTTCACGTATGTATTTAAGGTTGCATCATCATGCTGGGAGTAAGCCAGTTGAATTGCATGGAAGTGTGTATGAGGTAGCATGTTTAGACTGTGGTACATCCATTGACCGAGAATCATTCCAGGAGCAGGTCAAGGACCTCAACCCAAAGGTTTGCCTGTTTGATAGTTGCTTTTTTTTTTCTTTAAGCTATGTTCATTATATCAGTAGTATGTGCTGTACATATGACAGAAATTCAAAAAAAATATTAAATAGGTGTTAATGTTGACAGAAATTAAAATATTTGATAACTGAACTCTTGCATTTGATGCTATAATTGTCCAATAAATCAGACTTACAGTACATGAGTATAGGGAAATGATGTCATTTTCTGATCCAAGTTTCAAGTGAATCAATGGTTCTTACTCCCCTAATATGGACTATATTTCAGTTTTGGGACGAAGCATAATATATATTGCTTTATCTGCAGTGGGCTCTAGCTATTGACAGTTTGGAAGTAGGACAACCGGGCTCAGACAAAAGTTTCGGAATGCAGCAGCGACCTGATGGTGATATTGAGATTGATGAGAAGTTCTGGGAGCAAGATTTTGATATTCCTAGTTGCAACCAATGTGGTGGAGTGCTGAAACCTGATGTGAGAATACTCTCCTACCTTATGGGAGTACTTTTAGTTTTTTTTTTTAAAAAAATCTCACGTATAAGTATTTGGCATTTGTTTATTGCGGTTTGAATGAGGAGTATGACAGCAGGCCATATTAGTTAATGTTTTTATAACATTGATTTTTCATAATCAAACAAGGCCATCATTCCAATATATTATCCATTTTCAAACTTGATTTCCATGGTTTGCATGCATGCAGTCTTTCATTGGTGTGCATCTCTAGCAGTTCTTTTTTCGGACAATGTTTCTCTTACACTGTACAAAATTCCCTTTTTTTTCCTGATATTTTGGCAGCAGCTCATGTTACCACTTCGGAAAACAGCAAACTTTCTTCCTTCACTATTTAAAGTGATGTTCACGTGTGTTCTGATATTTGAAGGTTGTGATGTTTGGTGATAATGTTCCTGAAGAGAGAGCTGAAAGCACTAAGGAGGCTGCAAGAAATTGTGATGCTCTTCTAGTGGTTGGTTCAGCACTAATGACAATGTCTGCTTTTAGGCTCGCAAGGTACCACCCGAAATATTATTCAGCCACCCCCTTGTATAAATTTAGACCTAGTTATCATATGTTGAGAACCTTTTTCATGAGAACAAAAGATTGACGATAAATCCAATCCTAGGCTTGCACATGAAGCGAATGCTCCAATTGCAGCGATCACCATTGGTGAGACCAGGGCTGATAGTATTTTGTCCTTGAAAATTAATGCAAGATGTGGGGAGGTTAGTACTTTCATCTCATACTTATTTTTTGTAATGCATCATATGACTCACTGCATTTCTCCCTTGCTGTTATGCCACCATCTTCTTCAGATACTGCCCAGAATACTTCAGATGGGAAGTCTATCTGTACCAAATGTGAGTTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA036526

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA036526&oldid=52831"