BGIOSGA036588

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Revision as of 08:24, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA036588| Description = BGIOSGA036588| Definition = Oryza sativa Indica Group BGIOSGA036588, complete gene.| tag = | tid = BGIOSGA036588-TA|...")
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Gene Name

BGIOSGA036588

Description

BGIOSGA036588

Definition

Oryza sativa Indica Group BGIOSGA036588, complete gene.

LocusTag

'

Ensembl Transcript ID

BGIOSGA036588-TA

Ensembl Protein ID

BGIOSGA036588-PA

Length

1504

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:3310300..3311803

Sequence Coding Region

3311418..3311803,3310693..3310753),complement(3310300..3310623

Genome Context

<gbrowseImage1> name=IndicaChromosome12:3310300..3311803 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:3310300..3311803 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCAGGGGGTGGCGGCGGCGTTCGAGGCGGCGGCGGGGGCCGGGTCGGCGACGACGTACACGTCGCTGGCGCTGCGCACCATCTCGCGGCAGTTCCGGTGCCTCCGCGACGCCATCGCGGCGCAGGTCAGGGCGGCGAGCCGGGGGCTCGGGGAGGACTGCGGCGACGACGAGGGCGGCGGTGGCGGCGGGAGGACGACGGTGGGGTCGCGGCTGCGGTTCATCGACCACCAGCTCCGGCAGCAGCGCGCGATGCAGCAGCTTGGCATGGTGCACGCCGCCGCCGCCGGTGGCGCCGCCGGCGGCGGGTGGCGGCCGCAGCGTGGCCTCCCCGAGCGCGCCGTCTCCGTCCTCCGCGCTTGGCTCTTCGAGCATTTCCTCCACCCATACCCCAAGGATTCGGACAAGGTCATGCTCGCCAAGCAAACCGGCCTCACCAGGAGCCAGGTGTCGAACTGGTTCATCAACGCGAGGGTGAGGCTGTGGAAGCCAATGGTGGAGGAGATGTACGCCGAGGAGACCAAGGCCAAGGAGGAGGAGGAGGAGGAGCACGACGCGGCGGCGGCCGCCGCCGGCGACCGTTGCGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAGAGAGAGGGGCTTACACGGGGTCGGCGGCGCCGATGGCCTTCCAGAAGACGGCGTACGACCACCGGGCCTCCTCGCACAGCCGCCGCAGCGCATCACCGACGGCCATCCTCCTCCTCGGAAACCCTAGCTAA</cdnaseq>

Protein Sequence

<aaseq>MQGVAAAFEAAAGAGSATTYTSLALRTISRQFRCLRDAIAAQVRAASRGLGEDCGDDEGGGGGGRTTVGSRLRFIDHQLRQQRAMQQLGMVHAAAAGGAAGGGWRPQRGLPERAVSVLRAWLFEHFLHPYPKDSDKVMLAKQTGLTRSQVSNWFINARVRLWKPMVEEMYAEETKAKEEEEEEHDAAAAAAGDRCGXXXXXXXXXXXXXXXXXERGAYTGSAAPMAFQKTAYDHRASSHSRRSASPTAILLLGNPS</aaseq>

Gene Sequence

<dnaseqindica>1..386#1051..1111#1181..1504#ATGCAGGGGGTGGCGGCGGCGTTCGAGGCGGCGGCGGGGGCCGGGTCGGCGACGACGTACACGTCGCTGGCGCTGCGCACCATCTCGCGGCAGTTCCGGTGCCTCCGCGACGCCATCGCGGCGCAGGTCAGGGCGGCGAGCCGGGGGCTCGGGGAGGACTGCGGCGACGACGAGGGCGGCGGTGGCGGCGGGAGGACGACGGTGGGGTCGCGGCTGCGGTTCATCGACCACCAGCTCCGGCAGCAGCGCGCGATGCAGCAGCTTGGCATGGTGCACGCCGCCGCCGCCGGTGGCGCCGCCGGCGGCGGGTGGCGGCCGCAGCGTGGCCTCCCCGAGCGCGCCGTCTCCGTCCTCCGCGCTTGGCTCTTCGAGCATTTCCTCCACCCGTAAGTAATCAAATTTTGAATTTTAAAATTTAAATTTGTAGTTGATTTTAGGGGTTTTTTCTTATTTTCCTTTTTTAAAACAAGCCTTAGTTTTTAAGCCACTAATAATACAAATATAATAGTTTGCTTCACTCAATATTTTTCCACAGCTCAATTTCTCAAAGAAAAAAAACAATATGTATTTCCAAAGATGAGCAGTTGATGGCAAAATATTAAAATGGCATGCTCCATAAGATATTATTGAAATGTACAAGATTTGTTTGAAATAAAAACATCCATGCATCTCCCCCAAAATCGTACTAGAAACATGTAGGGCCTTGCACCTTGTCTCTTCTTCCCTGAAAAAAAAAAGTACTACAACATGTAAATGCATATGCAGACTCTAATTAATATCTCCTTCGTCACATAAAAAACTCAATTATAATTGTGAATTTAAAATATAAGTGTTTAGGTTTGAAATTAGGATTGGTTTTTTTTATAGCACGAAGTAGTACTATTTAAAGCTTTAATTCTTCATCAGCATATATAGTACTCCTACTATTACATGAACACGTAGAGACAAGTGATCAAGCTGCATTTTCGAGTGCACGCTCAAATCGGTGAATGAATATTTCCTCGTGTCGACGTCTCATTGGTCGCTGAGATTCGTTGTGACGTCATGCAGATACCCCAAGGATTCGGACAAGGTCATGCTCGCCAAGCAAACCGGCCTCACCAGGAGCCAGGTACGTACGTATACGTCTACGTACAATACTACGTCTACGTATGTTTGAAGTACGTGTACGTATTTGTAGGTGTCGAACTGGTTCATCAACGCGAGGGTGAGGCTGTGGAAGCCAATGGTGGAGGAGATGTACGCCGAGGAGACCAAGGCCAAGGAGGAGGAGGAGGAGGAGCACGACGCGGCGGCGGCCGCCGCCGGCGACCGTTGCGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAGAGAGAGGGGCTTACACGGGGTCGGCGGCGCCGATGGCCTTCCAGAAGACGGCGTACGACCACCGGGCCTCCTCGCACAGCCGCCGCAGCGCATCACCGACGGCCATCCTCCTCCTCGGAAACCCTAGCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA036588