BGIOSGA036713

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Revision as of 08:27, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA036713| Description = BGIOSGA036713| Definition = Oryza sativa Indica Group BGIOSGA036713, complete gene.| tag = | tid = BGIOSGA036713-TA|...")
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Gene Name

BGIOSGA036713

Description

BGIOSGA036713

Definition

Oryza sativa Indica Group BGIOSGA036713, complete gene.

LocusTag

'

Ensembl Transcript ID

BGIOSGA036713-TA

Ensembl Protein ID

BGIOSGA036713-PA

Length

1587

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:1562104..1563690

Sequence Coding Region

1563530..1563690,1563275..1563362),complement(1563197..1563240,1563062..1563118),complement(1562723..1562961
,1562518..1562636),complement(1562104..1562184

Genome Context

<gbrowseImage1> name=IndicaChromosome12:1562104..1563690 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:1562104..1563690 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGATCCATGGTCATCTCCTTTTGGATCCCTGTGTTTGGCCAGCTCGCTTTTGTCTTCTTTGGTGGTTGCCCTCTAACATGGACAGGGTTCTCATCCTCTGCTTTTACTGATCTTGGTGCTATTATGAAGCTTTCGCTATCGTCTGGAGTGATGCTTTGTTTAGAATTGTGGTACAACACCATATTGGTGCTCCTCACTAGTTATATGAAGAATGCAGAGGTTGCTCTTGATGCTCTNTTCTATATGTTTAGAAAACAACAACCAGATCATATTGTATCATGTATATCATTCCTTAATATCAACGGTTGGGAGATGATGATTTCTATCGGATTTTTGTCTGCAATAGGAGTGCGGGTGGCAAATGAACTTGGAGCCGGGAGTGCAAGAAGGGCTAAGTTTGCCATTTTCAATGTGGTCACCACTTCTTTCTTGATAGGATTTGTGTTGTTTGTGCTCTTCCTTTTCTTCCGTGGAAGCCTTGCATACATATTTACTGAAAGTAAGGCGGTAGCAGATGAAGTCGCTGATCTTGCTCCCCTTCTAGCTTTCTCCATTTTGTTGAATAGTGTTCAACCAGTGCTCTCAGGTGTCGCTATCGGATCGGGTTGGCAAAGTATAGTTGCCTATGTTAATGTTACATCGTACTACTTGATTGGTATCCCTCTTGGTGCAATACTAGGCTATGTGCTAGGATTTCAAGTAAAGGTAGAGATTACTCGAGAGAGATTAAACAGATGGTATATGGATGAGAACGGGCGATCACAGAATTCAATAGGAAATGCATGA</cdnaseq>

Protein Sequence

<aaseq>MGSMVISFWIPVFGQLAFVFFGGCPLTWTGFSSSAFTDLGAIMKLSLSSGVMLCLELWYNTILVLLTSYMKNAEVALDALFYMFRKQQPDHIVSCISFLNINGWEMMISIGFLSAIGVRVANELGAGSARRAKFAIFNVVTTSFLIGFVLFVLFLFFRGSLAYIFTESKAVADEVADLAPLLAFSILLNSVQPVLSGVAIGSGWQSIVAYVNVTSYYLIGIPLGAILGYVLGFQVKVEITRERLNRWYMDENGRSQNSIGNA</aaseq>

Gene Sequence

<dnaseqindica>1..161#329..416#451..494#573..629#730..968#1055..1173#1507..1587#ATGGGATCCATGGTCATCTCCTTTTGGATCCCTGTGTTTGGCCAGCTCGCTTTTGTCTTCTTTGGTGGTTGCCCTCTAACATGGACAGGGTTCTCATCCTCTGCTTTTACTGATCTTGGTGCTATTATGAAGCTTTCGCTATCGTCTGGAGTGATGCTTTGGTAAGTAACATGGTTATGTTTATATGTATATATGAAATTTTTGACAAAAAAAATTGATGATAGCAAATAGAAAGTTAATATTTTAGATGCTAATTGTTAATCAAGTTCTTTTATACAAATAATTAGAAGCTCATTAATTTATTCTCATTTTTCTTTTACCTTTTCAGTTTAGAATTGTGGTACAACACCATATTGGTGCTCCTCACTAGTTATATGAAGAATGCAGAGGTTGCTCTTGATGCTCTNTTCTATATGGTAATATATTCCACTCCAATCTGTTGCATATTAGTTTAGAAAACAACAACCAGATCATATTGTATCATGTATATCATTGTATGTTTTGTGTGTCTCCTCTAGTAATTGAAAAGGTTGCTTATTGAACATTGTTGTTTTCACTTGCAAAATTTGTAGCCTTAATATCAACGGTTGGGAGATGATGATTTCTATCGGATTTTTGTCTGCAATAGGGTAACTTCACGATCTCAGCTGTCACTCACTACGTGGTTCATCTAACTGATGCAACATGAACCATAAATTTGACATATACTTAATGCATGTACATTTTTAGAGTGCGGGTGGCAAATGAACTTGGAGCCGGGAGTGCAAGAAGGGCTAAGTTTGCCATTTTCAATGTGGTCACCACTTCTTTCTTGATAGGATTTGTGTTGTTTGTGCTCTTCCTTTTCTTCCGTGGAAGCCTTGCATACATATTTACTGAAAGTAAGGCGGTAGCAGATGAAGTCGCTGATCTTGCTCCCCTTCTAGCTTTCTCCATTTTGTTGAATAGTGTTCAACCAGTGCTCTCAGGTATGTTACTCCATTTGAAGGACAAGTATATATCAAAGTAATTCAAAATTTAACAATGAAATTACTAATTTTCTAATTATATATAGGTGTCGCTATCGGATCGGGTTGGCAAAGTATAGTTGCCTATGTTAATGTTACATCGTACTACTTGATTGGTATCCCTCTTGGTGCAATACTAGGCTATGTGCTAGGATTTCAAGTAAAGGTAAGGAATTTTTGTATGATAGAATTTCACTAGTTAATCTGGATTTAAGTTGTGTCCCTCACTTATGTTCATTCTTTATGTAGGGTATTTGGATCGGCATGCTTCTTGGAACACTAGTCCAGACTCTTGTGCTTCTATTCATCACACTTAGGACCGATTGGAAAAAACAGGTTGCCTTTTTTTTACCTCTGCTCATATTTTCTTTCTTATCCTCTTTTCTGATTAAATATCTTTTTTCAAATAATATAAGGGTCTCTCTAGAAAATTCATGGGTCATTAGAAGAGCATATTTTTCTCATTTAATGATGTGCTTGATGTTTAATTTTTTTTCAGGTAGAGATTACTCGAGAGAGATTAAACAGATGGTATATGGATGAGAACGGGCGATCACAGAATTCAATAGGAAATGCATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA036713