BGIOSGA036828

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Revision as of 08:29, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA036828| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA036828, complete gene.| tag = OsI_371...")
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Gene Name

BGIOSGA036828

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA036828, complete gene.

LocusTag

OsI_37104

Ensembl Transcript ID

BGIOSGA036828-TA

Ensembl Protein ID

BGIOSGA036828-PA

Length

6903

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:23843..30745

Sequence Coding Region

23843..23950,24068..24382,24486..24643,24755..26058,26397..26491
,27594..27672,28789..28817,29186..29341,30220..30366
,30473..30745

Genome Context

<gbrowseImage1> name=IndicaChromosome12:23843..30745 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:23843..30745 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGCTTGCTGGCTTCTTCGACCTCAGCATCCTCCCCGACGACTCCAAATCTACCACCACCAACACTAGCATAGTCGCCTGCGCCCTTGACCTCAGCTACTCCGCCTACACGCGCATCACCCTCTCCCTTGACTCCGCCGCCGCCTGCGCCTCTGCCCTAGCCCCCTCCGCCGCCCGCCTCCTTCGCACCTATGACATCATCGCCGCGCGGCCGCTCACCCAAGCCGCCTTCGACCACCTCTGTCAGGCCACATTTGACCACCTTGATATCGTTTCCATCGACTTCTCCCACAAGCTGCCCTTCCGCCTCAAGCTCCCCATGCTCAAGCTTGCGCTGCAGAGGGGCCTGCACTTGGAGATCGCCTATTCTCCCCTCATCGCTGATGCTGCTTCAAGGAGACAGGCCATAGCCGAAGCCAAGCTCTTGGTGGAGTGGACTAAAGGAAAGAATCTCATCATCTCAAGTGCTGCTCACACTGCTTCTGAAATTAGAGGACCCTATGATGCCATAAATTTATCTTCTTATTTGCTTGGCCTTTCTACCCAACGAGCCAAAGCTGCTCTATCCGTCAACTGCAGGTCACTGATTTCCAAGGCTCTGAGGAAAAAGCACTTCTTCAAGAAAACCATTAGAATCGACGGGCTGTTACCAAATAAACAGTTGAATTCAGCAAACTTCAAGCTTGCTGACTGGATTGGTTGGGATCCTATGCCTCATGAAGCAGATCTGCTATCTTTGGACGTTAATCCAGAACCTTCTTCCGACAAATATGAATTGCTATCTTACAAAGGAGAACCGCAATCTCTTGATATAAATCCAGAACCTTCTGCCAATAAAGATGAACTACTGTATTTACCCATAAATGCTCTCACCAAAGCATCAAGTCATGTACCTTATGATGGTGATGAGTCCCTCTTTGTCGAGCAGCAAGAGCAGTTAAGCCATGGCAACGAAATCCTATTCCCAGTTGAAACTCAAGAAGGGCCTGTGCAAGTTAGCAGAGGTGAAAGTCTTATGACTTGTGTATTGTCTACCTTGCCAGCATCTTGTGAGCAGCATAGTGTTGCTACCAATTTGGATAATCCTGGAAACAATGAAACTGTTATGGCTCATGATGTGCAGACTGCTGCTGTCTCTTCCTTTGATCTGAAAGGCATTGAGAAACATGTTGAATCTCTGCATGATGCTATGGAACTAGATGGTACAGAGTCAAGTAAAATGAACCTCATTGCAGATTTTACCGCTCCCTTATCTTCTGATGATAACTTGGTGTGTTATGCTATTCCATGTAGTATGGAACTTTCTGACACGAGTGTCGTGAATAAGTGCCCTCACCAGTCTACTGGCTTCCCAGATTATGCTAAAGCTTGTACAGAATGTGACTCTGGGTTGACCTCCTGTGAGAGGGTTGATCAGGCAACACAGGATCATGACATTCTTTCTGGTTCCAGTATTTACTCTAAGAATAAGGACCTCTACTCTTACAGTGACATCTCAGTTTTTTCTGTGACTCACAAAGATTTTGCAGAACCGCTAGAGTTGCCTCCATGTGGGAAAGATGATGAGGCGCCACCAGATCTTGCAGCTCAATTGCACTGTAATTCATGCAAGGATGTTATGATGCCACCGCAAGTTATAAGCGATGAAGTAGAGCCAGTTGACAGAGGAGCAACTATTTTAGTGGAACATACTCCCTGTGGTCCAGAGACTGCCTTGATTGCTTTTCTTTATGATAAAGGATCCATTGATACAACCAGTAAAACTGATGAGTTGGCAAAGCAAAACTCAAACTCTCTGGAGGGAGATGTTGCTAAAATACATGAACAACTACTAAACTATTCTTATGCTAGTGGTGAGGTGGAGATATCCCTAACTAGATCAGAAAAGCGAACCAAAAAATTAAGGTCGCAACATCCGATTTATGTTCCTTTCTTGGGCTTCCTCAAGTCTGTGTCCTTTAAGAAGAAAGCATCCAAGGGACTGACAAATCCTATTTTATCATGTATTGATTATGGACGTGGTACTGCCCTATTGTTACCTACAAAATTGGATTCTAGTTACATCCAAAAGGAAATCATAGCAACTGCTGCAATGTTCAAAGGGGACATGATTGTTCCTCACCAAAATCTTGGGAGATGTCACTTTTTGAAAAAGCTTACCATAGGATTGCTGCGGACTTTGGAGGGAGAATCTTATCGAGGACCGTCTTTTATACTTGTATCTAATCATGATCAGCATTCGGGCTGGAGCTCATCATCATCTTCGTCGTCGTTGCTCCGCCGGGTGGAGGAGGAGGCGGTGGGGAGGTACAGCGCGGAGGAGCGGCGGGAGCGCATTGACAAGTACCGGAGCAAGCGCAATCAACGCAATTTCGACAAGAAGATCACCTACGCTTGCCGGAAGACGCTCGCGGACAGCCGGCCGAGGGTGAAGGGCCGCTTCGCCCGCAACTCCTCCGACGACGGCGCTGCAGCTGAAGTCGAGGTGTCGCCGGCGACGAATAATAATGTGCCGGAGTGGTGGCCGGCAGTGCAGGAGGCGCTGGCCAGGCAGGAGCAGGAGGCGGCTGGCCTCCATCTCTGCGACACCGCCGACGATGACCTGCTAGCCGCCTACCTCGGCGTCTCCTCCATCGATCTCTACTCACCCCGCGGCCACTGA</cdnaseq>

Protein Sequence

<aaseq>MALAGFFDLSILPDDSKSTTTNTSIVACALDLSYSAYTRITLSLDSAAACASALAPSAARLLRTYDIIAARPLTQAAFDHLCQATFDHLDIVSIDFSHKLPFRLKLPMLKLALQRGLHLEIAYSPLIADAASRRQAIAEAKLLVEWTKGKNLIISSAAHTASEIRGPYDAINLSSYLLGLSTQRAKAALSVNCRSLISKALRKKHFFKKTIRIDGLLPNKQLNSANFKLADWIGWDPMPHEADLLSLDVNPEPSSDKYELLSYKGEPQSLDINPEPSANKDELLYLPINALTKASSHVPYDGDESLFVEQQEQLSHGNEILFPVETQEGPVQVSRGESLMTCVLSTLPASCEQHSVATNLDNPGNNETVMAHDVQTAAVSSFDLKGIEKHVESLHDAMELDGTESSKMNLIADFTAPLSSDDNLVCYAIPCSMELSDTSVVNKCPHQSTGFPDYAKACTECDSGLTSCERVDQATQDHDILSGSSIYSKNKDLYSYSDISVFSVTHKDFAEPLELPPCGKDDEAPPDLAAQLHCNSCKDVMMPPQVISDEVEPVDRGATILVEHTPCGPETALIAFLYDKGSIDTTSKTDELAKQNSNSLEGDVAKIHEQLLNYSYASGEVEISLTRSEKRTKKLRSQHPIYVPFLGFLKSVSFKKKASKGLTNPILSCIDYGRGTALLLPTKLDSSYIQKEIIATAAMFKGDMIVPHQNLGRCHFLKKLTIGLLRTLEGESYRGPSFILVSNHDQHSGWSSSSSSSSLLRRVEEEAVGRYSAEERRERIDKYRSKRNQRNFDKKITYACRKTLADSRPRVKGRFARNSSDDGAAAEVEVSPATNNNVPEWWPAVQEALARQEQEAAGLHLCDTADDDLLAAYLGVSSIDLYSPRGH</aaseq>

Gene Sequence

<dnaseqindica>1..108#226..540#644..801#913..2216#2555..2649#3752..3830#4947..4975#5344..5499#6378..6524#6631..6903#ATGGCGCTTGCTGGCTTCTTCGACCTCAGCATCCTCCCCGACGACTCCAAATCTACCACCACCAACACTAGCATAGTCGCCTGCGCCCTTGACCTCAGCTACTCCGCCGTCGCGCTCGATCACCCTCACCGTGGCCTCCTCACTGACTCCCATGCACCCATTGCCTCCTCTCTCCTGCTGCCGCCCTCTGCCCCCCTCCACCACCGCCGACATCCCTTCCTATAGTACACGCGCATCACCCTCTCCCTTGACTCCGCCGCCGCCTGCGCCTCTGCCCTAGCCCCCTCCGCCGCCCGCCTCCTTCGCACCTATGACATCATCGCCGCGCGGCCGCTCACCCAAGCCGCCTTCGACCACCTCTGTCAGGCCACATTTGACCACCTTGATATCGTTTCCATCGACTTCTCCCACAAGCTGCCCTTCCGCCTCAAGCTCCCCATGCTCAAGCTTGCGCTGCAGAGGGGCCTGCACTTGGAGATCGCCTATTCTCCCCTCATCGCTGATGCTGCTTCAAGGAGACAGGCCATAGCCGAAGCCAAGGTTGGCCATCTCTTGCTCTTCCTTATTATCTTCGCATATCTCTCTATATCGTAACACTAATACTTAGTTCCTTAGTAACCAAAGCCTTTTCATCTTTTTTCAGCTCTTGGTGGAGTGGACTAAAGGAAAGAATCTCATCATCTCAAGTGCTGCTCACACTGCTTCTGAAATTAGAGGACCCTATGATGCCATAAATTTATCTTCTTATTTGCTTGGCCTTTCTACCCAACGAGCCAAAGCTGCTCTATCCGTCAACTGCAGGTCACTTGCACATCTCTTATATGATATCCGGAGCTTATTTTAGAAAGCTAGGCAGTTTAGTCTGAATCATGATGCTGTGCCATGTATTCTAAGCCATTTGTTCATTCTCAGGTCACTGATTTCCAAGGCTCTGAGGAAAAAGCACTTCTTCAAGAAAACCATTAGAATCGACGGGCTGTTACCAAATAAACAGTTGAATTCAGCAAACTTCAAGCTTGCTGACTGGATTGGTTGGGATCCTATGCCTCATGAAGCAGATCTGCTATCTTTGGACGTTAATCCAGAACCTTCTTCCGACAAATATGAATTGCTATCTTACAAAGGAGAACCGCAATCTCTTGATATAAATCCAGAACCTTCTGCCAATAAAGATGAACTACTGTATTTACCCATAAATGCTCTCACCAAAGCATCAAGTCATGTACCTTATGATGGTGATGAGTCCCTCTTTGTCGAGCAGCAAGAGCAGTTAAGCCATGGCAACGAAATCCTATTCCCAGTTGAAACTCAAGAAGGGCCTGTGCAAGTTAGCAGAGGTGAAAGTCTTATGACTTGTGTATTGTCTACCTTGCCAGCATCTTGTGAGCAGCATAGTGTTGCTACCAATTTGGATAATCCTGGAAACAATGAAACTGTTATGGCTCATGATGTGCAGACTGCTGCTGTCTCTTCCTTTGATCTGAAAGGCATTGAGAAACATGTTGAATCTCTGCATGATGCTATGGAACTAGATGGTACAGAGTCAAGTAAAATGAACCTCATTGCAGATTTTACCGCTCCCTTATCTTCTGATGATAACTTGGTGTGTTATGCTATTCCATGTAGTATGGAACTTTCTGACACGAGTGTCGTGAATAAGTGCCCTCACCAGTCTACTGGCTTCCCAGATTATGCTAAAGCTTGTACAGAATGTGACTCTGGGTTGACCTCCTGTGAGAGGGTTGATCAGGCAACACAGGATCATGACATTCTTTCTGGTTCCAGTATTTACTCTAAGAATAAGGACCTCTACTCTTACAGTGACATCTCAGTTTTTTCTGTGACTCACAAAGATTTTGCAGAACCGCTAGAGTTGCCTCCATGTGGGAAAGATGATGAGGCGCCACCAGATCTTGCAGCTCAATTGCACTGTAATTCATGCAAGGATGTTATGATGCCACCGCAAGTTATAAGCGATGAAGTAGAGCCAGTTGACAGAGGAGCAACTATTTTAGTGGAACATACTCCCTGTGGTCCAGAGACTGCCTTGATTGCTTTTCTTTATGATAAAGGATCCATTGATACAACCAGTAAAACTGATGAGTTGGCAAAGCAAAACTCAAACTCTCTGGAGGGAGATGTTGCTAAAATACATGAACAACTACTAAACTATTCTTATGCTAGTGGTGAGGTGGAGATATCCCTAACTAGATCAGGTAAGATATGAAGTAGGCATTGTTAAACAGTTTGAATTTGTTACCTTTTGTGTTTACTGGTGACTATTCTTGAGATTTTTCTAATTACGAAGGCTATTTTGTTCTCTGTCATGTCCTTTCATGCTTGCAGCTAGTATAAAGTCAACAGTGAAATGATTCACTAGGTTTTGAGGAAGATCAATTTAAGGGATCTATTGTTTCATTGTGTTTGAACTTAGCTTAACATGTATTAGTTTATATAAGAAGTATTGAGCATTGATTTTAGTATGAAGACAATCAAAGAAATTGAGATTTATGCATATCTTTTAAGCATATCTGAAGATTTGGTTGTTTTGCAGAAAAGCGAACCAAAAAATTAAGGTCGCAACATCCGATTTATGTTCCTTTCTTGGGCTTCCTCAAGTCTGTGTCCTTTAAGAAGAAAGCATCCAAGGTAAGAAGCCTGTTCGTTTTTTTCATACCAGATTATAGATTATGTTGAGTCATGAGGGATATTGCTAACATATGTGCACGCTGAATCCTGTATCAGGTATGGTTTTTTGAGGATACCTCTAAACACGAATTCCTTGTCTGTTATCAGTGTGATATGAATAATGAAAAACAAGAGTTGGTACTTGACTTCTTTTTATATTGTATTGGTAGAGATATTGTTGCTTGAACTGTGTGACAGGATACTCTTTATTTAGATAATTACAAACTCATGTAGTTATAAGTTCAATGTGCCATGATGCCACGTGGGAGCTGTTCTACAACCATAGCCAGTCTGCTTAGGTAGGCCTCTCGAAAGTCAGGTTTGGCTAAGACTAGGTAACCTTAGCTCTAGCTCTGTGCAGGCTTGAGCCAATCTAGAGTTGAACAAGCCTAAGTTGAGGTTTGAGCTTACATAAGCCCGAGGTGGACTAGATGAGACTTGATAACTACAAAATTTTAGGTACTCCAGCATACATAGGCTTGAGTTCAGCTCTGTAAGGATAGTTTAACTTTAAACACACATGCATGAGCATATCACAAGGCTATAAAACAGTACTACCTCCGTCCAAAAATAAGGGATTTTTCCCATATAATTACTTGGGTAAAATCCCTTATATTTTGGGACAGAGGTAGTATATATTAGTGTTATGGTATAAACATGTGATTGAAGACTTATTGAGCGAACTGCATGCTTAGCTCAATGAGTGCTTGAGCCTGTTTTGGGCTCAAGCTCAGCTCCACTGAGTCTGAGTCAAGCTCGCAATGCTTGTCAAGTCTGAACGCTCATTTGACAGCCCTGCCCAAGAGGAATGCATCCTTTATTTAACCGGACCGTATCAGATTAGTAGCATTAAAGTTCCAGTTAAGTCATCCTTTATTTAGTGTTCAAAGGGTGGTGTTTGCTTAATCTTAAGTATAAGGTTAATCAGACAATTATGTCTCCCTGTTCCTTATACTGTCCCTCCCACGATTTCCTAGCCACAACCAACAAGACCGATGCAACCTGGTCCTTGCTCATCATGTCACCAAGAGACCACAACTATGTGCTGTGCTCTTTGTTCCAGGGACTGACAAATCCTATTTTATCATGTATTGATTATGGACGTGGTACTGCCCTATTGTTACCTACAAAATTGGATTCTAGTACGCGAAATCTTAGAAAAAAAAAGCTCTGATGATGCTGAAAATATGGCATCTGGATCATAATATGAATCTCGTGATCTCACTACTTTTTCCCTCCCTTCTGCTAATTTTTATGGATGCAGTTTTCAAGACAGTGTAGACTTGGTGTGGCTTGTTTAGAATAAAGATAATTTTTATTTAAGGCCGAAGCAGGTGAACGTGTAGCTGGTAGAGCACCCAGTAGAAGTGCCACCCGCCTAGGGATTGAATCCTGGGAGCCACATTTGTGCTCACCTCCCTGTGCTACAGTTGCAGAGGGTCCCAGGCTAGCAAGACGCATGCGCTGGTGAGGTTCCTGCCTGGCTAGGTTTTGATGGGACCCCTTCTTAAAAGCTAAGTCAAGGGGGTTGTCCTTCCCCCTTGATCAAGTTTTTTTTTTTTGATTTAATGCCGAAAGAAATAGAAGCATGAATTCAGTATGCAGTTTCAATCTTTCAGATTTGATATGGAAAAGGTTTAAGAGACCATGAAAGCAATAGAAGGCCTCACCCCCACAGATGCACCCAAATGAAGATGTGGAGACTGAACAAAAATCTTTTAATTATATCATTCATGCCACTAGACTGAGGTCTTACCAGCCTTCATCAGTGTCGGGTCTCATTTGCCTAAGATCATGACATTTGAATTGACTCATTGGGTGTTCCTAACTTCACACTACATACGAATAGTGTTGTACCTTAAGATACCTGTAGGAGTAAATTAGTGAAATTGCTGACTTTTTGTCTCTTAATGCCAATTCTTGGTACAATTGCATTTCTGTCTAGTCTGTTACTCAATTCTGTAAATTCTGTATACATATCAACATAACAATTATTGCTTTCCACTCATGCTATAGTGGTGCGACTATTCTTAGAGTTGACCTACAAGAAGAAAAAGTAATATCTACAAAAACTGCACACTATCATAATAGTCCCACTTGTCGTCACTATCTTTACCCCCACCCTTCCTCTTTCACTCTCGCCTTTTGAATTTCATAATTCCCATCTACTGATTCTTGTAATTTCTTTTTCTGTGCACCTAATTATCAATGCTTAATTCATCTGATAGTGATGGTGCTCTTAATTGAAACCAATGCAGGTTACATCCAAAAGGAAATCATAGCAACTGTAAGAACTTACAATTTAAGAATTTTGCTGCACATGAAAGGAAAATGAATCTCTATGCAAGGTTACTCCGTGGTGCCCTTTGACTTTATCCTGTCGGGTTGGCTAGGCCTACTTGAGGTTGGTCGAGCTCAGTTGTCAGGATAAGTCAACAACTCAACATGATACGCGATTCTTAAGTGGGCTACTGTAGGGATTAATCAGAAGCTGTGCCATAGCAGAAGGCAGACCTGTGGTGGATTTAGGACACTTCCAGTTACCTCACCAACAAATTGCCAATTGAAAACTGCGTCCTGGATCTAGAGCAGCAAACTTCTGTCCAATAGATGGTTGAAAAACAACACAGATTCCTGTGGATCTCTATCTTGTAGGCTGCAATGTTCAAAGGGGACATGATTGTTCCTCACCAAAATCTTGGGAGATGTCACTTTTTGAAAAAGCTTACCATAGGATTGCTGCGGACTTTGGAGGGAGAATCTTATCGAGGACCGTCTTTTATACTTGTATCTAATCATGATCAGCATTCGGTGAGCTTCCTGCACATCTTTATTTTCATTTATCCAATTTTGCATATCCTTGCCTTTATGACTGTATCTGAGCATCCTATCGTTAATGATCAGGGATGACAAAACCTTGGAATCAGCCAAATTGGCATATCCAACCCCAGAATAGTGAGTTTGGATTCTTGCAGCAAAGTGGTAGGGCCTGATGTTAATTTGTGGTGAATAGCAATTTGAGCAATAGTGCCAGTGTTGAACAATGGCATATCCCCTGGTGTACAGCAGGGAATATGCATGGTTGAAGGATGTGAGTGGAAGAGGTAGGAGATATACCCAACTTGTCCATGTCTCCTTGAATGGTCTGTACTGGCTGCCTTGGCCGTAGTGTTGGTGTTGAGATTGCCGGGTAGCTTGTTGATTGTGGCACTTTTTATACTAATCGATTGATGAGATAGATTCTCTTTACGAGAAAACTTGTATTGATTAGTTGCTGTTGGGCTGATGTATGTGTTGTGCGCAACAGCGAGCTTCCATTCTGTCTGTCATGTAGGAGTATGCTAGTGGCAGTGGTGGCTATCAGTCGTTCTGATGCTTGTACTAGTACCTTACTAGCCTGCTTACCTTTGACATGCCAGCTTCCTTCTCAACATTGCAAGGAAATACAGGGATATGCTATATACATGCACGAACATCAAATCATACCCTATCACAAAGTGGAGCAGCTCATGTCAAATCAGGGCTTAACCAAAATTAAGAGTTGACTCCTTTGAAGAGATCAGATCAAATTGAAGAGAAGCTAGTGGCAGTGGAAGTGGAGGCCAAGGCGGCCATATATAAATGGCCTGATCAATGTATCTACCTTCACGTACGTACCTGGACTAACTACCACAATGTATCATCATCAGGGCTGGAGCTCATCATCATCTTCGTCGTCGTTGCTCCGCCGGGTGGAGGAGGAGGCGGTGGGGAGGTACAGCGCGGAGGAGCGGCGGGAGCGCATTGACAAGTACCGGAGCAAGCGCAATCAACGCAATTTCGACAAGAAGATCACCGTAAGTAACTAACTACTAGTATTTCATTTTAATCAACAATTAACATAGATCCTTCTCTCTCATTACTTAGGTAATTCATGTGCATGGTTGCTTTAATGAATTGCAGTACGCTTGCCGGAAGACGCTCGCGGACAGCCGGCCGAGGGTGAAGGGCCGCTTCGCCCGCAACTCCTCCGACGACGGCGCTGCAGCTGAAGTCGAGGTGTCGCCGGCGACGAATAATAATGTGCCGGAGTGGTGGCCGGCAGTGCAGGAGGCGCTGGCCAGGCAGGAGCAGGAGGCGGCTGGCCTCCATCTCTGCGACACCGCCGACGATGACCTGCTAGCCGCCTACCTCGGCGTCTCCTCCATCGATCTCTACTCACCCCGCGGCCACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA036828