BGIOSGA036936

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Revision as of 08:31, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA036936| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA036936, complete gene.| tag = OsI_373...")
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Gene Name

BGIOSGA036936

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA036936, complete gene.

LocusTag

OsI_37351

Ensembl Transcript ID

BGIOSGA036936-TA

Ensembl Protein ID

BGIOSGA036936-PA

Length

5163

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:1737227..1742389

Sequence Coding Region

1737227..1737229,1738313..1738382,1739181..1739233,1739394..1739538,1740024..1740142
,1740244..1740315,1740741..1740847,1741153..1741263,1741301..1741493
,1741675..1741845,1742264..1742389

Genome Context

<gbrowseImage1> name=IndicaChromosome12:1737227..1742389 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:1737227..1742389 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGCCATGGTTTTCGTAAGGAGCTAATATACATGCTTTTGGAATTAAGGCCACAGTTCCTACGCTTTCCTGGGATCAGCCACCATGATGAAGTTGATACCATCATAATTGAACCTTTTGTTAAGGATGTATTGGATAGTCTTGAATTTGCAAGGGGAAGCGCAGAATCAACATGGGGCTCTGTTAGATCTGCAATGGGGCATCCCGAACGGTTCCCACTGAAGTATGTTGCTATTGGAAATGAAGATTGTGGGAAGGAATTTTACCGAGGAAATTACCTCAAGTTTTATGATGCTATACGCAAGGCCTATCCAGACATTCAAATGATTTCAAACTGTGATGGATCATCTAGGCCGCTTGACCATCCTGCTGATTTGTACGATTTTCATGTATATACCAGTGCTGCTAATCTTTTTATCATGAAGAATAAGTTTGACAGGACATCACGCATTGGGCCTAAGGTATTTGTCAGTGAGTACGCTGTCAATGAACAAAGGGATGCTGGTAAAGGAAGCCTTCTTGCTTCACTGGCTGAGGCTGCTTTCCTTACTGGGTTGGAGAAAAATAGTGATGTTGTTCAGATGGCAAGTTATGCACCACTCTTCGTAAATGACAATGACAGCACGTTAGTACCTCCAGCTTTGCTCCTTTTTATTTCCAACGTTCTTGTTGGTCACAACTGGAACCCAGATGCAATTGTGTTCAATTCCTGGCAGCAGTATGGCACTCCTAGTTATTGGGTGCAGACATATTTCCGTGAATCAAGTGGTTCTGTGATTCATCCGATTACGATCAGTTCCAGATATTCTGATTCATTGGCTGCTTCTGCAATCACCTGGCAAGACTCTGAGGATATCTTTCTGAGAGTAAAGATAGTAAACTTTGGGCCAAATGCTGTGAACCTCACAATATCTTCAAGAGGACTTCAAGATGGCGTCAACACTGCAAAATCAACTGTGACTGTTCTCACATCCGGCAACTTTCTGGATGAAAATTCATTTAGTGAACCAAACAAGGCAAGACAACCATTGTTTCCATCACAAGTCGTGCCGGTTGAAAGCGAGCTGCCAAATGCTGCAGAGGTGATGGAAGCAGTGCTCCCTCCTTTTTCATTCACTTCGTTTGACCTCGCTCTGGATCAATACAGCAAGCTCGTAGCAGAGATGTGA</cdnaseq>

Protein Sequence

<aaseq>MGHGFRKELIYMLLELRPQFLRFPGISHHDEVDTIIIEPFVKDVLDSLEFARGSAESTWGSVRSAMGHPERFPLKYVAIGNEDCGKEFYRGNYLKFYDAIRKAYPDIQMISNCDGSSRPLDHPADLYDFHVYTSAANLFIMKNKFDRTSRIGPKVFVSEYAVNEQRDAGKGSLLASLAEAAFLTGLEKNSDVVQMASYAPLFVNDNDSTLVPPALLLFISNVLVGHNWNPDAIVFNSWQQYGTPSYWVQTYFRESSGSVIHPITISSRYSDSLAASAITWQDSEDIFLRVKIVNFGPNAVNLTISSRGLQDGVNTAKSTVTVLTSGNFLDENSFSEPNKARQPLFPSQVVPVESELPNAAEVMEAVLPPFSFTSFDLALDQYSKLVAEM</aaseq>

Gene Sequence

<dnaseqindica>1..3#1087..1156#1955..2007#2168..2312#2798..2916#3018..3089#3515..3621#3927..4037#4075..4267#4449..4619#5038..5163#ATGGTATGAGTCCTTATCGATGTAAAATAACTCATTGTCCAAATAATCTTTTTTCTAAACTACAGTTACTGTACAATGCTGTCACTTAAAGGAAATACAGCAAAGTTGTGATCTTTTTTCCAAAAAGTTAAACTAATAGCTAACGTTACCTATATTTTGCTTGATTTCATTTTATGCTCATTTTTCTGACATAATGTTGTCTTTCTATGCAATAGTTCTGTTTTTTTTACTTGGAAATATGAATATCTGTTATAGTTTTTCTTCCGACCATTTCTACTTTTATCTTCTGATATATATATATATATATATATATATATATATATATATATATATATATATATATATTTATTTATTTATTTATTTATTTGCTTGGGATTTTACCATCTGATTTTTGGATGAACCTGTTCGTTCCAACTTCCAGAACATAGAAGAAGGAAAGACCTATAATCTAGTCATGTATATCAGATCATTAGAATCTGTGGAGTTGACAGCTTCTCTCACATGTTCAGATGGAATGCAAAATCTGGCATCAGTCTCTATACAGTATGTATCTTTGACATAACACTGAAATAAATAATTCTTGATGTGTTTTTCATTTATGATTGAAAGGATTGCATATTGAAATGTTGCAGAGAGATTGATCCGTCAAATTGGACAAAGATAGAGATGCAATTATTGGCTCAAGGAACATGCAGAACTTCAAGACTTGAATTAACAAGTATGAAAAGGGGAGTAATTTGGTTTGATCAAGTGTCACTCATGCCATCAGACACATACAAGGTTCACTGCATTTTCATCCTGCTATTGGCTACTGACAGTCATGAGCATGCTTTTCTATGGGAGTAGCCAGTGAATATTCATCCACTGCTTTGTGACGCAGCTAATGTACTAGCAGAATTATAAGTTATTCATAAATGCGTAGGAAACATGTTGATTCAATCTCATTGTTAATTAGTGATACTTAATAAATCTACTTATATTCATTTTCACAAAACTTTGGAAAAAAAAAGTCCTCATTTGTTTATTGCTAGACCATGCTTATTAGTTTCCGCATTTGTTAACGGGAAATTTCTTATATATGTACAGGGCCATGGTTTTCGTAAGGAGCTAATATACATGCTTTTGGAATTAAGGCCACAGTTCCTACGCTTTCCTGGTATTTCTTATGTTCCCAAAAATCATATTTTAACTAGAATTAGACCAAAATGAACATTTAGATAACTAAAACTAAACCTGAACATGCATACAATCATAAGAATTTTATGATTTTTGCCGGGTAATATGAATTAATAGTGATAATATATTGTATTTACTGTGTGATTCTATTTTGTGGTTATGCATGCTTTGCAAGAGGACTTCTAAACCAATTCTGGGATACTAACAAGCATAAATAATTAAGAAATAATACTCTAGAGTAAAGCATCAAAAAGTTGTGGTCAATTAGTACGAAACCAGCATGATTGTAGATTTATCTATATTTGCATTATATATGGTTCCATGATTGCAGCAACTAACTTTTGAACAATTCTACACATATATTGAGTCAAAATTTTGTATCACAATTATGACAGGGGGGTGCTTTGTTGAAGGTGATTGGTTAAGAAATGCTTTCAGGTGGAGAGAAACTATTGGTCCATGGGAACAGAGACCTGGGCACTTTGGAGATGTTTAGAATTATTGGACCGATGATGGCCTAGGATATTATGAGTTTCTCCAGGTATATGTTGATTAATGCAATCTGAGTTTTTTTTATCTCTTCTGCTACCAACATATCTAACCAAATATTTCTACCGAAATTTTCATGGAAAGCTTGCTGAAGACCTGGGTGCTGCCCCTATTTGGGTGTTCAATGTTGGTAATACATTCTAATTATTTAAAATTTTCCTGTTTTACCATATCTTTTCTCATCGCTAGCATGCCCATTACCAGCTTACAATTTTACCTTGAAATTTAGGGATCAGCCACCATGATGAAGTTGATACCATCATAATTGAACCTTTTGTTAAGGTACGTTAAATGCCAAAATTAAGAATAGTCATCCAAATAGAACTGGGTAGAGGATTACTCCGGTTCGACTTTTCCTTATTGCAGATGCCATCGTAGCAAAACAAAATGTTTTCTATGCATTTGTCATTCTTTAAGTTCATTATTTTTTTTCTATTTATAGGATGTATTGGATAGTCTTGAATTTGCAAGGGGAAGCGCAGAATCAACATGGGGCTCTGTTAGATCTGCAATGGGGCATCCCGAACGGTTCCCACTGAAGTATGTTGCTATTGGAAATGAAGATTGTGGGAAGGAATTTTACCGAGGTATATTTTTATTAATCAGAATTTGACATACTACTGATCCCATTTGTTGTCAATGCCATAGTTGTTTTTCTTAGGTTGGTACATCTATAGGCTGAAATGGTGTGATGGCCAAGTGTACTTAACACAAAATCCCTCATCATATATGACTGCATATCTAAAACCACTTATTTTCCTTCTTCTTTACCCCTTGTTTTTCTTTGTTTGTATGCCGTCGTTACTTTGTGGAGTCAACTACAATTATGGCAAAACAATTTCATCCTTACAGATAAGCATAATAAAAATATAAACATTCGCAACAAATAATAGATGAAAATAGAATGGATGTAACTTTGAGCTATTTATGTCATCAGTTTCTGAGGATAGATTTTCTTTGCACATGAAGTTACTATAACATTCACTAATTTCATGAAAATACCAGAGAGCTAGCCAATAGTATCCCACTTGTCCCCGAGTTGCCCATGATGGTTTGAAATCCTATCTTACAGGAAATTACCTCAAGTTTTATGATGCTATACGCAAGGCCTATCCAGACATTCAAATGATTTCAAACTGTGATGGATCATCTAGGCCGCTTGACCATCCTGCTGATTTGTACGATTTTCATGTAATCTTCATTCCATTTTCACTGTTTAAATACTGTCTCATTACTTCTAACATACTTTTCATTGTGCTTTTATTAAGATGCACTCTGACATATTTTTTCAGGTATATACCAGTGCTGCTAATCTTTTTATCATGAAGAATAAGTTTGACAGGACATCACGCATTGGGCCTAAGGTATTTTTCAGTCCTTGTTTGGATGGTCAAGGATCCGTGGCCATCACGGCCCATCCAAAATATGGACTTTGTTTTTGTGATTTATTCTGGCAATAGATATATCCTCGAAATACTCCTATATGGGTTGGTCTTTAATTGACCTATCATCCTAACTTTGGTGGAATATTTTTAGGACATTATTTTTTTTCCATGTTATTCTACCTGAGGCTGGCCACTGGCATGTTTATTTATTAAATTTCTTCAGAAATTATATTGAAGTCATAATATTATATGTGTAACTTCCATTAATGATAGTGTTCTAGTGTCACAACACTTCAGCCGGCTTTGTTTCTCTGTATCATTACAGTTCTCTTGCATCCCGACGCCCTAGGATATTGGATACACAGAAAGTACTTATTAATTAATATGCTATGATCCTGTTCCAGGTATTTGTCAGTGAGTACGCTGTCAATGAACAAAGGGATGCTGGTAAAGGAAGCCTTCTTGCTTCACTGGCTGAGGCTGCTTTCCTTACTGGGTTGGAGAAAAATAGGTGATCTCTCTCACTTCTTCCTTTCTTTGGATAATCTCTCATTCCATATTCTTGGGACTAACTGAATCGTGCATGCAGCTGTATTTAGATCATTCATGACTTTTCCAGGATAAATTTCAGTATTGTCTTGGATAATTAGTAGTTTATGACCCTATTCAGATAATCACATTTGGAACAAAGGGAAAATGTCTGTTGTTCAGAAATTACAAGATAATGAATAATACACGTATTGTAAATATTAATAGTGAGCAGCAAGAATACTCTATCATGAATAAATTAAAAGTGTATGTCCTGTTTATCTGCAGTGATGTTGTTCAGATGGCAAGTTATGCACCACTCTTCGTAAATGACAATGACAGCACGTTAGTACCTCCAGCTTTGCTCCTTTTTATTTCCAACGTTCTTGTTGGTCACAAGTACGCGAGTTTGACTAGATCTTAATGTAATGATCAGCTGGAACCCAGATGCAATTGTGTTCAATTCCTGGCAGCAGTATGGCACTCCTAGTTATTGGGTGCAGACATATTTCCGTGAATCAAGTGGTTCTGTGATTCATCCGATTACGATCAGTTCCAGATATTCTGATTCATTGGCTGCTTCTGCAATCACCTGGCAAGACTCTGAGGATATCTTTCTGAGAGTAAAGGTAAACTAACCATTCCAGTTTCTCCTAATTTGCATACCCTTGCAGCAATTCATTACACAAGCACCTAAATGTTTTGAATGATTTAGTTACAACGATATAAAACTGATTCAACTACTGCATACTTGGATAACATCTCTTTGGATTTTAGAACATATGTTGATCTTCAAAAGATCTTCTGCAGATAGTAAACTTTGGGCCAAATGCTGTGAACCTCACAATATCTTCAAGAGGACTTCAAGATGGCGTCAACACTGCAAAATCAACTGTGACTGTTCTCACATCCGGCAACTTTCTGGATGAAAATTCATTTAGTGAACCAAACAAGGCAAGACAACCATTGTTTCCATCACAAGTTTCTTGTTTCATAACCATGCACTGAATTTAGCAGAGGGCAACCTTACCATTACAAATTTACAGTCTGCCAATATATATGCAAGCCGTATGACTTATTTAATCAAGTAGTGTATGTTATACATAAGGCATAAACTTTTGTAGTCTTATAGATGTCCTCCCCTCTGTCTTTTTTTTTCACCGAGCCCTCTCCTCTGTCTTTCAGTTTTATCTGTAAGTTTTCCAGGAAATAGTTTATTTGGTTATGTCTCAATGTCTGGAATCATTTCCTACAAGTATTTCTAGAAGTTGCACCTTTTTTTGATAGAGTTGCCAAAATTTAGTTTGGAGAGTCTGTTAGAGATGCTCTAACACGCAATATTCTCAGGTGTTGGCGAGTTCATCTAACATACAAGTATCTTTGTGAATGACGCATGCAGGTCGTGCCGGTTGAAAGCGAGCTGCCAAATGCTGCAGAGGTGATGGAAGCAGTGCTCCCTCCTTTTTCATTCACTTCGTTTGACCTCGCTCTGGATCAATACAGCAAGCTCGTAGCAGAGATGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA036936