BGIOSGA036941

From RiceWiki
Revision as of 08:31, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA036941| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA036941, complete gene.| tag = OsI_373...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA036941

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA036941, complete gene.

LocusTag

OsI_37360

Ensembl Transcript ID

BGIOSGA036941-TA

Ensembl Protein ID

BGIOSGA036941-PA

Length

2103

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:1794762..1796864

Sequence Coding Region

1794762..1795303,1796288..1796864

Genome Context

<gbrowseImage1> name=IndicaChromosome12:1794762..1796864 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:1794762..1796864 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCATCTGTAGTGTTTGGTCAAAGGAATGTGCGTGTCTTTCCCCTGAGGAGGCACATATTGGATGAGGTGTTTCAGCATGGTCCTTGTAATTGTAGCACACAGAGGAGGTGGAAAAAGCCAATTGATTCAGCAAGAACTCGTCTGGAGGGCAGAATAAGGGATCATAAACTGGACAAGCTGATGATTCAACTGAAGAACCTGAGGCTAGCTTTGGATTTGCATGAGTTCATATCTCAGCAGAGGAATGGCTACGCATCTCTCCAACTCCTCTCCAGGTGGAGACATGAAGTCGGGCTAAACATTGAGATTGGGGCTTTCCTTAAGAAATATCCCCACATCTTCGACATTTATGTGCACCCAATAAAGAATAACCAATGCTGTAAGGTCACTCCAAAGATGGCTGATTTGATTGCAGAAGAAGATGCTGCCATCTGGGAAAATGAGCCTGCTATTGTTAAACGGCTGAAGAAACTCCTCATGCTGTCGACAGATGGAACTCTGAATATGCATGCACTGTGGCTCATAAGAAGAGAACTTGGGGATGAAAATTTAGCTGTAGCCGATGTTGAAGAATGGAGAGTGAAGGAATATGCAGAAAAATGGTTAGCTGAATCTGAGACAAAATATTCTTTTCCTATAAACTTTCCAACCGGCTTTAAGATTGAGAAAGGTTTTAGGGAAAAGCTTGGTAACTGGCAGAGGCTTCCCTACACCAAGGCTTATGAGAATAATGAATTGCATCCAATCCATAATGTTGAGCAGCTCGAGAAACATATTGTTGGCATTCTTCACGAACTTTTAAGCTTGACAGTGGAAAAGATGATACCACTTGAGAGGTTCTCCCATTTCAGAAGACCTTTTGATATGGAGGTAAACCTGAGGGAACTTGTTCTTAAGCACCCTGGCATTTTCTACATCTCAACCAAAGGAAGCACACAAACTGTCCTCCTTAGAGAGAATTACAGTAAGGGATGCTTGGTTGATCCTAACCCTGTCTACAATGTAAGAAGGAAAATGCTAGATCTTATTTTGTCAGGATGCCATGGGATTGATGAAACGGATGGTCCAATTCAGTTAGTTGAGGAGCACAATCAAGAAAGCAGTAATGTGTCATAG</cdnaseq>

Protein Sequence

<aaseq>MASVVFGQRNVRVFPLRRHILDEVFQHGPCNCSTQRRWKKPIDSARTRLEGRIRDHKLDKLMIQLKNLRLALDLHEFISQQRNGYASLQLLSRWRHEVGLNIEIGAFLKKYPHIFDIYVHPIKNNQCCKVTPKMADLIAEEDAAIWENEPAIVKRLKKLLMLSTDGTLNMHALWLIRRELGDENLAVADVEEWRVKEYAEKWLAESETKYSFPINFPTGFKIEKGFREKLGNWQRLPYTKAYENNELHPIHNVEQLEKHIVGILHELLSLTVEKMIPLERFSHFRRPFDMEVNLRELVLKHPGIFYISTKGSTQTVLLRENYSKGCLVDPNPVYNVRRKMLDLILSGCHGIDETDGPIQLVEEHNQESSNVS</aaseq>

Gene Sequence

<dnaseqindica>1..542#1527..2103#ATGGCATCTGTAGTGTTTGGTCAAAGGAATGTGCGTGTCTTTCCCCTGAGGAGGCACATATTGGATGAGGTGTTTCAGCATGGTCCTTGTAATTGTAGCACACAGAGGAGGTGGAAAAAGCCAATTGATTCAGCAAGAACTCGTCTGGAGGGCAGAATAAGGGATCATAAACTGGACAAGCTGATGATTCAACTGAAGAACCTGAGGCTAGCTTTGGATTTGCATGAGTTCATATCTCAGCAGAGGAATGGCTACGCATCTCTCCAACTCCTCTCCAGGTGGAGACATGAAGTCGGGCTAAACATTGAGATTGGGGCTTTCCTTAAGAAATATCCCCACATCTTCGACATTTATGTGCACCCAATAAAGAATAACCAATGCTGTAAGGTCACTCCAAAGATGGCTGATTTGATTGCAGAAGAAGATGCTGCCATCTGGGAAAATGAGCCTGCTATTGTTAAACGGCTGAAGAAACTCCTCATGCTGTCGACAGATGGAACTCTGAATATGCATGCACTGTGGCTCATAAGAAGAGAACTTGGGTTGCCCAATGACTAAAGGTGCTCTATACTACCAAACCATCGGTCAGAGTTTTTTTTGAGAATACGCGAGGGGCGCATCTTTGTATTAAGAAGGAATAAAAGTATTTACAGAGCGGGCCGAAAAATCAAAAACACGAAGGGGACAAGATACAGGAGGGGGGAGGAGGAAGAAAATAAAAGCCTAATCTCCCAACGAATGTGGCGACCTTCCACCCGACATAGGGGTCGCCATGGCCGGTATCGCGGCTCTAGCCAACCGCCAAAGGTCCGCTTCGCCCGTCATGGCCCTAGCAATTTCCGACCATGTCCTGCTCTTTTCGTTGAAGACCCGATTGTTTCTTTCTTTCCAAATCGTCCACGCCACCAAAGTTGCAATGGTGTCGAACCCTCGACGATGTTCCTTGGCCATTCTTTTGCGACTGTCACATAGCCAGGAGTGGAAAGAGTGCTCATTGAGAGGCAGACATTCAGAATGACCGATAGCTGAAAGAGCAATCCACCATAGCTGGCGAGACTCCGAGCAAGCAACCAATAAGTGATCAATCGTCTCATCGCATTGATCACAAAGAGGGCAGCGAGCCGGGTGTGACAGTCCTCGACTCCGAAGACGATCCGCTGTCCAACAACGATTCAGTGCGACCAGCCACAAAAAGTACCGACAGTGCGGGGGCGCTAGAGACTTCCAAATTGGCTTGTGCTCGAGGCTGGTTCTTCCCGCGAAGAGAAGACGATACGCCGAGCGAGCGGAGTAGGACCTCGAGCTTTCCCAACGCCAAGAGATCGTGTCCGGTTCCTCACCTAGCTGAATCGAGCGCAGAATGTCCCAAAGCTTGAGATATTCCAGGATTTCCTAAATCCCCAGTGCCGCACAGATGTCTCGAATCCACCTCCTGTCTTGCAAAGCCTCAGCTACCGTTCGTCTGTTCCGGACCATCGGTCAGAGTTTTCTCTAGGTTCCCCCGATACTCTGACATTTGTCACTAGGGATGAAAATTTAGCTGTAGCCGATGTTGAAGAATGGAGAGTGAAGGAATATGCAGAAAAATGGTTAGCTGAATCTGAGACAAAATATTCTTTTCCTATAAACTTTCCAACCGGCTTTAAGATTGAGAAAGGTTTTAGGGAAAAGCTTGGTAACTGGCAGAGGCTTCCCTACACCAAGGCTTATGAGAATAATGAATTGCATCCAATCCATAATGTTGAGCAGCTCGAGAAACATATTGTTGGCATTCTTCACGAACTTTTAAGCTTGACAGTGGAAAAGATGATACCACTTGAGAGGTTCTCCCATTTCAGAAGACCTTTTGATATGGAGGTAAACCTGAGGGAACTTGTTCTTAAGCACCCTGGCATTTTCTACATCTCAACCAAAGGAAGCACACAAACTGTCCTCCTTAGAGAGAATTACAGTAAGGGATGCTTGGTTGATCCTAACCCTGTCTACAATGTAAGAAGGAAAATGCTAGATCTTATTTTGTCAGGATGCCATGGGATTGATGAAACGGATGGTCCAATTCAGTTAGTTGAGGAGCACAATCAAGAAAGCAGTAATGTGTCATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA036941