BGIOSGA037016

From RiceWiki
Revision as of 08:32, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA037016| Description = Os12g0155300 protein| Definition = Oryza sativa Indica Group BGIOSGA037016, complete gene.| tag = OS12G0155300| tid ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA037016

Description

Os12g0155300 protein

Definition

Oryza sativa Indica Group BGIOSGA037016, complete gene.

LocusTag

OS12G0155300

Ensembl Transcript ID

BGIOSGA037016-TA

Ensembl Protein ID

BGIOSGA037016-PA

Length

4120

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:2939112..2943231

Sequence Coding Region

2939112..2939318,2939421..2939636,2939733..2940750,2940834..2941877,2941950..2942375
,2942493..2942797,2942911..2943074,2943150..2943231

Genome Context

<gbrowseImage1> name=IndicaChromosome12:2939112..2943231 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:2939112..2943231 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTTTTCGAAAAGGAGTGTGTTCGGAATATTCAACTTCTTCCTGGTGAATATTTCTGTCCTGTTTGTCGGACGCTCATATGTCCCAACGAAGCTCTGCAAACTCAGTGCACACATCTCTACTGCAAACCCTGCTTGGCTTACATAGTGGCAACAACACAAGCCTGCCCTTATGATGGCTATTTGGTTACAGAAGCTGATTCCAAGCCTCTGATGGAATCAAATAAACCCCTTGCTGAGACAATTGGTAAAGTTACAGTCCACTGTCAGTATCACAAGAGTGGTTGTCAATGGCATGGTAATCTGTCTGACTGCATCACACATGGTACTACTTGTGCCTATGGGAACTCTCCTGTAGTTTGTAACCGTTGCAGTACTCAGATTGTACACCGTCAAGTGCAAGAACATGCTCAACTCTGTCCAGGTTTGCAACCTCAGGCGCAAGCACAACACACTGACAGTAGTATGATGCAGTCATCAGCAACAGGAACCCAGGCAGCCGTGCAAGGTCCTTCTGCAGTGGCCTCAGCAGTCCCTATGACGCCTGTTACAGCAGCTCCTACAACAGTACCATCCACAACTACAGCCAGAGCTGGAACAGATTCTGCTATCGCAGTTGCTTCAGCTGGTTCAACCACTGTAAGCACCGTGGCTGTGGCTCCTTCACTTCCGGTGGCACCTACTGCTGCTAGTCAAGGTCAAGCACTTGCTCCTCAAACTCCAACAGCTGAGCAATACCAGCAGCAGCTCCAGTACCAGCAGTACTACCAGCAACATTACCCTGGATATAACCCCTACATGCAGCAGTATCAACAGTATGGTCAGTACCAACAGTACACACAACCTCAGACGCAAATTGCACCCCAGAATGTGGCTCAAGCTCCTGCGCAATCTGCTCCATATGCTCAGCCTCAAGTTCTACAGCCCAATCAGCCCCAACACATGGTGCCATTCCAACCTCAGAATCAGCCCCACCTTACACAACTCCAAGCACCAGCAGCTCAGTCACAGTCTCAGCAGCATCCACCATTGCAGTCTGCAGCTCAAACTCAAATTGTACAAGCACAACCACAAAGCCAAGTATCTTTCCAACAGCCTCAACCCCATGCACAACCTACAACCCATACACCAGTCCCTACACAACTTGGTAGCCAACCATTTGCAATGCCTCCTACTCAAGCAACACCATCTGAAGTTCAGCCACATGTTCAACCTCATATTCCACAGCACCATCAGGTTATGGCTCAGCAACAACAGCCACAACTGCAGCATTTACCTCAGCAGCAACATCCAAATGCACAGCAGCAATCTTATCCACAAATGCAGGCATATCATCAGCCTCCTCCAATGTCTCATGCACAACCTCAGAATCCTTCAGTTCATGCAGTAACAGGTCATCAATCATTTTCACAGCCTCAGCCAGCACATCAGATGCAACAAGGNCCAACAACCAACTATGATGGCTCAGGGATTCAGCAGACACCACAACATCAGCATGTTGGGCATCATGCCCTGCGGCCAGAAATATATGCTAGCATTCCTCCACAGGCAGCACCACAAGGATTCCCTCTAAACGCACCTGCTCCCTCACAAACAGGTCAATCATACCAACAAGGAATGCCCTCATCACAACAACTGATGCATGCACCTCTCCAATCCCAAGGCCAACAATTTATGCAACAGCACCCTACTCATACTTCTGCTGGTCGGTCTATGAATTATGTTGCACCACAAGAGCAGTTCCAAAATCAATCTGGTGGTCCAGTTAAAGGTTTACAGGCAGGTGTGATGAATCAACAACCACCAATGCGTATGGCCTCTGATAATGTAGGAGCAACATCTGAATTGCATGGTGCTGGACAATCTTTTGGGCAGGGCTCTTCGTCTTTAAAAAAACCTACTTCGGAATCTGAGAAATCAGAAAATGCAACTAATGGTACTGGTAATACAGAAGTAAGTGGGAAAAATGGAAGTGCTGAATCAGCTCTTGTAAATCCTATTTCATTGGATGGGTCAGATGGTTCAGACAAGGGGAAGGGGAAAGGAAAAGTTGACTTTTCAGCTTGGGAAAGTAATTCACATGATCCAGATGCTCGGGGAGGCAAAGGGACTAGGTCTGGTATATCAAATGATCTTGTGAAAGGTGGATCATTACAGCAGGCACCACAACATCCTTATGGACCTGATTCAATGCTTCCTCAACATATGCGTCAGCCTGGGCATATGCCGTATATGCAGGGGCTGCCAAATCAAATGAGGCCACCTAAACATTCCTTTCCTGAAAATAGTCGGCCTCCAATGCAACAACCATTTGAAATGGCACCTAGGGTGCCTGGTCCAAACCAAAATCAGATGCAAATTTCACAGTCCATCAGACCTGATGGTGCTATAGTTCGGCCACCGATGGGGGCACCAATGCCTGGGCTGCATGATTCAACAGTTCCTCCTTTTGCTCCTGAATATGTTGGTCAGCCTCATCCTCTTGGAACTAAAAAGAACAATAGTGTTGGCAATGGACCACATGGAGGCTCAAGGGCTTTATTTGAAGGTGGATTCAATTCTTCACAGAAACATTCCAAGTCATGTGCAGCAAATCCTGGCAGAAACAACGTTAGCCACAAAGATTTTGAAGATAATATGAAGCAGTTTCCAGTGCCTACTCACCTTGACGGTGAAGGTCATCAAAGGGGTCCTAGACCTTTTGAAGGAGGTTTAGGTAGACCTGATGGTTTTGCTGATATATTACCTGGAAGGCCTCCATTGACAAATCATCCTGGTCCATTTCCTATAGGCTTCGGAGAAGATTACCCAAGGAAACCCAATTCGACTGTTAGTTATCCTGACTTTATTTCGCCTGGTGCAGAATTTGGTCATCGTGGTATTGATGGAATACCTACTCTTAGAAATGCAGGTCCATTTCTTCAAGGGATGACAGGCGGGCCTGGAGGTTTGCATAAAGATCAGCTAGGCTCTAGTAACTTTCCTGGGAGTGGACACCATGATTTTGACAACTCAGAGTTCCCTCGTACTCGATTCCATCCTGGTGATGCTTTTGTGCCAAGAAATCTGCACGGTGGTGGTTGGGGTGGTGGCCAATTGCATGGCATTGAGCCTTCTGACTATGGCTACAGAGGTCACATGCATGCAGATGATCCAAATATTCCAATTGATTATTCTCGGCATGGTTTTCCAAAAGAATCTGCCCACTTTGGTTCGGGTGGACACTTGAGAGATGGAGATGTCAGTTGGTGCCGTATATGCAATATTAGCTGTGGTACAGTAGAGAACCTGAATATACATGTAGAGACCAGGGAACACCATCAACATGCAATGGACATTGTTCTGAAAATGAAGCAAGATGTTGCAAAGGGGAGAAAGAATTCCTTCAGGAATTCTGGTGGTCCCAAGTCATTCAAGAAAAAAGTACCTGGGAAGGGTAGCTTTCGTGGAAATAGGCGTTAG</cdnaseq>

Protein Sequence

<aaseq>MVFEKECVRNIQLLPGEYFCPVCRTLICPNEALQTQCTHLYCKPCLAYIVATTQACPYDGYLVTEADSKPLMESNKPLAETIGKVTVHCQYHKSGCQWHGNLSDCITHGTTCAYGNSPVVCNRCSTQIVHRQVQEHAQLCPGLQPQAQAQHTDSSMMQSSATGTQAAVQGPSAVASAVPMTPVTAAPTTVPSTTTARAGTDSAIAVASAGSTTVSTVAVAPSLPVAPTAASQGQALAPQTPTAEQYQQQLQYQQYYQQHYPGYNPYMQQYQQYGQYQQYTQPQTQIAPQNVAQAPAQSAPYAQPQVLQPNQPQHMVPFQPQNQPHLTQLQAPAAQSQSQQHPPLQSAAQTQIVQAQPQSQVSFQQPQPHAQPTTHTPVPTQLGSQPFAMPPTQATPSEVQPHVQPHIPQHHQVMAQQQQPQLQHLPQQQHPNAQQQSYPQMQAYHQPPPMSHAQPQNPSVHAVTGHQSFSQPQPAHQMQQGPTTNYDGSGIQQTPQHQHVGHHALRPEIYASIPPQAAPQGFPLNAPAPSQTGQSYQQGMPSSQQLMHAPLQSQGQQFMQQHPTHTSAGRSMNYVAPQEQFQNQSGGPVKGLQAGVMNQQPPMRMASDNVGATSELHGAGQSFGQGSSSLKKPTSESEKSENATNGTGNTEVSGKNGSAESALVNPISLDGSDGSDKGKGKGKVDFSAWESNSHDPDARGGKGTRSGISNDLVKGGSLQQAPQHPYGPDSMLPQHMRQPGHMPYMQGLPNQMRPPKHSFPENSRPPMQQPFEMAPRVPGPNQNQMQISQSIRPDGAIVRPPMGAPMPGLHDSTVPPFAPEYVGQPHPLGTKKNNSVGNGPHGGSRALFEGGFNSSQKHSKSCAANPGRNNVSHKDFEDNMKQFPVPTHLDGEGHQRGPRPFEGGLGRPDGFADILPGRPPLTNHPGPFPIGFGEDYPRKPNSTVSYPDFISPGAEFGHRGIDGIPTLRNAGPFLQGMTGGPGGLHKDQLGSSNFPGSGHHDFDNSEFPRTRFHPGDAFVPRNLHGGGWGGGQLHGIEPSDYGYRGHMHADDPNIPIDYSRHGFPKESAHFGSGGHLRDGDVSWCRICNISCGTVENLNIHVETREHHQHAMDIVLKMKQDVAKGRKNSFRNSGGPKSFKKKVPGKGSFRGNRR</aaseq>

Gene Sequence

<dnaseqindica>1..207#310..525#622..1639#1723..2766#2839..3264#3382..3686#3800..3963#4039..4120#ATGGTTTTCGAAAAGGAGTGTGTTCGGAATATTCAACTTCTTCCTGGTGAATATTTCTGTCCTGTTTGTCGGACGCTCATATGTCCCAACGAAGCTCTGCAAACTCAGTGCACACATCTCTACTGCAAACCCTGCTTGGCTTACATAGTGGCAACAACACAAGCCTGCCCTTATGATGGCTATTTGGTTACAGAAGCTGATTCCAAGGTACTGCTATCTTCTTAAGGGAATGCTTTGTGCATATTCAGTTCATCAAGTATATTTGGTGGTAGTGATCCCTTTATTTACAACCTGATTTGCAATATGCAGCCTCTGATGGAATCAAATAAACCCCTTGCTGAGACAATTGGTAAAGTTACAGTCCACTGTCAGTATCACAAGAGTGGTTGTCAATGGCATGGTAATCTGTCTGACTGCATCACACATGGTACTACTTGTGCCTATGGGAACTCTCCTGTAGTTTGTAACCGTTGCAGTACTCAGATTGTACACCGTCAAGTGCAAGAACATGCTCAACTCTGTCCAGTATGTCCATCTCCATCATTCCTTATTACTCCCTCGATATGTATTAGCATCATTTCCCTATTCACTAATGTTTTTTCCCTTTGCATGTTATTGCAGGGTTTGCAACCTCAGGCGCAAGCACAACACACTGACAGTAGTATGATGCAGTCATCAGCAACAGGAACCCAGGCAGCCGTGCAAGGTCCTTCTGCAGTGGCCTCAGCAGTCCCTATGACGCCTGTTACAGCAGCTCCTACAACAGTACCATCCACAACTACAGCCAGAGCTGGAACAGATTCTGCTATCGCAGTTGCTTCAGCTGGTTCAACCACTGTAAGCACCGTGGCTGTGGCTCCTTCACTTCCGGTGGCACCTACTGCTGCTAGTCAAGGTCAAGCACTTGCTCCTCAAACTCCAACAGCTGAGCAATACCAGCAGCAGCTCCAGTACCAGCAGTACTACCAGCAACATTACCCTGGATATAACCCCTACATGCAGCAGTATCAACAGTATGGTCAGTACCAACAGTACACACAACCTCAGACGCAAATTGCACCCCAGAATGTGGCTCAAGCTCCTGCGCAATCTGCTCCATATGCTCAGCCTCAAGTTCTACAGCCCAATCAGCCCCAACACATGGTGCCATTCCAACCTCAGAATCAGCCCCACCTTACACAACTCCAAGCACCAGCAGCTCAGTCACAGTCTCAGCAGCATCCACCATTGCAGTCTGCAGCTCAAACTCAAATTGTACAAGCACAACCACAAAGCCAAGTATCTTTCCAACAGCCTCAACCCCATGCACAACCTACAACCCATACACCAGTCCCTACACAACTTGGTAGCCAACCATTTGCAATGCCTCCTACTCAAGCAACACCATCTGAAGTTCAGCCACATGTTCAACCTCATATTCCACAGCACCATCAGGTTATGGCTCAGCAACAACAGCCACAACTGCAGCATTTACCTCAGCAGCAACATCCAAATGCACAGCAGCAATCTTATCCACAAATGCAGGCATATCATCAGCCTCCTCCAATGTCTCATGCACAACCTCAGAATCCTTCAGTTCATGCAGTAACAGGTCATCAATCATTTTCACAGCCTCAGCCAGCACATCAGATGCAACAAGGTGCTCCACTGCAACGTTCCCTACATGTATCTCAGCAGCAAATGCCTAGTGCTCAGCATCATGCACTTGCACATACTCCACAGGNCCAACAACCAACTATGATGGCTCAGGGATTCAGCAGACACCACAACATCAGCATGTTGGGCATCATGCCCTGCGGCCAGAAATATATGCTAGCATTCCTCCACAGGCAGCACCACAAGGATTCCCTCTAAACGCACCTGCTCCCTCACAAACAGGTCAATCATACCAACAAGGAATGCCCTCATCACAACAACTGATGCATGCACCTCTCCAATCCCAAGGCCAACAATTTATGCAACAGCACCCTACTCATACTTCTGCTGGTCGGTCTATGAATTATGTTGCACCACAAGAGCAGTTCCAAAATCAATCTGGTGGTCCAGTTAAAGGTTTACAGGCAGGTGTGATGAATCAACAACCACCAATGCGTATGGCCTCTGATAATGTAGGAGCAACATCTGAATTGCATGGTGCTGGACAATCTTTTGGGCAGGGCTCTTCGTCTTTAAAAAAACCTACTTCGGAATCTGAGAAATCAGAAAATGCAACTAATGGTACTGGTAATACAGAAGTAAGTGGGAAAAATGGAAGTGCTGAATCAGCTCTTGTAAATCCTATTTCATTGGATGGGTCAGATGGTTCAGACAAGGGGAAGGGGAAAGGAAAAGTTGACTTTTCAGCTTGGGAAAGTAATTCACATGATCCAGATGCTCGGGGAGGCAAAGGGACTAGGTCTGGTATATCAAATGATCTTGTGAAAGGTGGATCATTACAGCAGGCACCACAACATCCTTATGGACCTGATTCAATGCTTCCTCAACATATGCGTCAGCCTGGGCATATGCCGTATATGCAGGGGCTGCCAAATCAAATGAGGCCACCTAAACATTCCTTTCCTGAAAATAGTCGGCCTCCAATGCAACAACCATTTGAAATGGCACCTAGGGTGCCTGGTCCAAACCAAAATCAGATGCAAATTTCACAGTCCATCAGACCTGATGGTGCTATAGTTCGGCCACCGATGGGGGCACCAATGCCTGGGCTGCATGATTCAACAGTTCCTCCTTTTGCTCCTGAATATGTTGGTCAGCCTCATCCTCTTGGTAATTCTCTGTAACAAATCTAATATGTATGTATGTGTTTGCAAGCATATGACCAAACTTCCATTTATTCAGGAACTAAAAAGAACAATAGTGTTGGCAATGGACCACATGGAGGCTCAAGGGCTTTATTTGAAGGTGGATTCAATTCTTCACAGAAACATTCCAAGTCATGTGCAGCAAATCCTGGCAGAAACAACGTTAGCCACAAAGATTTTGAAGATAATATGAAGCAGTTTCCAGTGCCTACTCACCTTGACGGTGAAGGTCATCAAAGGGGTCCTAGACCTTTTGAAGGAGGTTTAGGTAGACCTGATGGTTTTGCTGATATATTACCTGGAAGGCCTCCATTGACAAATCATCCTGGTCCATTTCCTATAGGCTTCGGAGAAGATTACCCAAGGAAACCCAATTCGACTGTTAGTTATCCTGACTTTATTTCGCCTGGTGCAGAATTTGGTCATCGTGGTATTGATGGAATACCTACTCTTAGAAATGCAGGTAAGGATCAGAATCACCTTCATCCTTTTCATCATATTTCATAAATGGCGAAAAGTTTAGTACACCTTGATCCTTTTCATCATATTTCAGTGACTAATGGATTAAAATGAAATTTAGGTCCATTTCTTCAAGGGATGACAGGCGGGCCTGGAGGTTTGCATAAAGATCAGCTAGGCTCTAGTAACTTTCCTGGGAGTGGACACCATGATTTTGACAACTCAGAGTTCCCTCGTACTCGATTCCATCCTGGTGATGCTTTTGTGCCAAGAAATCTGCACGGTGGTGGTTGGGGTGGTGGCCAATTGCATGGCATTGAGCCTTCTGACTATGGCTACAGAGGTCACATGCATGCAGATGATCCAAATATTCCAATTGATTATTCTCGGCATGGTTTTCCAAAAGAATCTGCCCACTTTGGTTCGGTGGGTTATTGGTGTTTCTTTCTATAATATGCTTTATCTCTTCCCATATGATATTGCTGTTACCTGATGTTCTGTTTACCCGCTGAACTCTTGTTTGGTGGTCTTCTCTATAGGGTGGACACTTGAGAGATGGAGATGTCAGTTGGTGCCGTATATGCAATATTAGCTGTGGTACAGTAGAGAACCTGAATATACATGTAGAGACCAGGGAACACCATCAACATGCAATGGACATTGTTCTGAAAATGAAGCAAGATGTTGCAAAGGGGAGAAAGAAGTGAGTATACTAGTTTTAATTCTAACATACTTGGTTAAGCATTGCCCATCTGTGGTTTTAAACTCTCCACTTCAGTTCCTTCAGGAATTCTGGTGGTCCCAAGTCATTCAAGAAAAAAGTACCTGGGAAGGGTAGCTTTCGTGGAAATAGGCGTTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA037016