BGIOSGA037098

From RiceWiki
Revision as of 08:33, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA037098| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA037098, complete gene.| tag = OsI_376...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA037098

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA037098, complete gene.

LocusTag

OsI_37686

Ensembl Transcript ID

BGIOSGA037098-TA

Ensembl Protein ID

BGIOSGA037098-PA

Length

6011

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:4360714..4366724

Sequence Coding Region

4360714..4360921,4362613..4362683,4365176..4365319,4366011..4366135,4366522..4366616
,4366696..4366724

Genome Context

<gbrowseImage1> name=IndicaChromosome12:4360714..4366724 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:4360714..4366724 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGATCTCGAGGAGTAGTAGTCGCCAACGGAGGTGGGTGGGCAGCGCGCGTGGCAGGTGTGCAGAGGAGTCGGCGTCGGCGGCGGGGAGGAGAAGGAGTAGGAGTAGACCCGTCGGCGTGATCTGGAGCGGAGTCGACGGCGGCGGCGTTGGCTGCGGTTGCGGGTGGGCAGCGGCAGCGTCGCCGGCTGGGGCGATTGGGCGAGATCTTAGTGTCCCTAGATATGGAAGGAAGAGAGGCAGGCTTATGGTAAGCCCTGGTGAATATTTGTGGGAGCTGCGGGACACCGTTCTTTCCTTCCCCCTTTCGAAACGCTCAAAAACCCTCTCCGACTCTCCCCTTCTCCTCCCACTCTTCTCCGGCGGCGGCGGGAGCGCATCGGAGATGATCATCCCGGTGCGGTGCTTCACCTGCGGGAAGTGGCAGTGGAAGACAGCGAGGGGAGGAGAGGCATTGGGATCTAATGGTCGCGACAGAGATGGTCTGCTATGGGGAGGTGGCCGCCAGCTGGCAGATGGAGATGCCGATCTCAGCATGCGCACATGGGATGCTCTGGATGCATTGGGTTTGGTCCGTTACTGCTGCCGGCGAATGCTCATGACCCACGTTGACCTCATCGAGAAGTTACTCAACTACAACACGCTGGAGAAGACCGAGACTGCAGGTTAA</cdnaseq>

Protein Sequence

<aaseq>MAISRSSSRQRRWVGSARGRCAEESASAAGRRRSRSRPVGVIWSGVDGGGVGCGCGWAAAASPAGAIGRDLSVPRYGRKRGRLMVSPGEYLWELRDTVLSFPLSKRSKTLSDSPLLLPLFSGGGGSASEMIIPVRCFTCGKWQWKTARGGEALGSNGRDRDGLLWGGGRQLADGDADLSMRTWDALDALGLVRYCCRRMLMTHVDLIEKLLNYNTLEKTETAG</aaseq>

Gene Sequence

<dnaseqindica>1..208#1900..1970#4463..4606#5298..5422#5809..5903#5983..6011#ATGGCGATCTCGAGGAGTAGTAGTCGCCAACGGAGGTGGGTGGGCAGCGCGCGTGGCAGGTGTGCAGAGGAGTCGGCGTCGGCGGCGGGGAGGAGAAGGAGTAGGAGTAGACCCGTCGGCGTGATCTGGAGCGGAGTCGACGGCGGCGGCGTTGGCTGCGGTTGCGGGTGGGCAGCGGCAGCGTCGCCGGCTGGGGCGATTGGGCGAGGTGAGGAGGCGACGTAGGGAGGAGGGCGAAGGACGCGGATCCGAGAGGAGCGAGCGTGGGGAGGAGATCGGTCGTTGGATACTTGGATATGCAAATTGGATGGTTGAGATTACGCGTGTCTGTCAGATGCGTCTGCTATGTCAGGAATCAAGACCACCACTACGGATTTTTTAAGTAGTAGAGATAAGATGGAGAAAGTAAGAAAGTAAGTACCACTTAACCAGGCTATAACGATGCGGATACTTTCCCCTCTCTCTGTTTTTTTAATAAAAAAATGAAATCTGTATGGTCAAAAAGATTTATGGTCACAAGTGTCAGTTGATTATACAAGAGTGAAGGAAATATTTTGGTTGATCCTCTGAATTTTCTTCTTAAAATGGTGTAAACTAGGCGTAAAATCTAAGAAAAGGAATATTTAGCATATCTTTATTATCCACAGTTTTTTAAAAAACAATGCTTGAAAATAAATTACAATAAAAGAACAAAATCAGCATTAAATTAAGTTTCGAAATTTAAAATTTGCCTGCGGTTGATGAACAATGATGATACATTTGAAACACGGAACTGTCGTTCAAGATATTTGAATCACAANNACCCCTTATTTNNNTTTATCCNNAAANCCCTNNGAANGNGGGAATTTACTTGGTGTACATATACCCTCTATCCCGAAATAATTTTACTTTTATACATGAATCTGGACACGGGCTATATCCAGATTCATTAGGTTATATGTACTCCAACTGACATGTGGGGTCACCCACATGTATGTGTGGGTGGGTTTTATGCCGTATAAGCTGCGGGACACCGTTCTTTCCTTCCTTCCTCCCTTTCGAAACGCGCAAAAACCCTCTCCGACTCTCCCCTTCTCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGAGTTTGGAGGTGGATGGTTGGGGTTTTGCCCGAGATCTTAGGAGTTGGGTAGAAAGTTGAGGTTTTTAGATGCAGATCTTTCTTGATCTGGGAGCGTTTCTGGCCGAGATTTTTCTTCTACTCTCTGCCCCCTGATGACTTGAATCTGTGGAACTAGTGCAACGCGGTAGCACCGTTTGCTTGCTTGGAACTGCAGGATTGGTTAAAAATTGCTTTGTTTTAAGCTTAGTTTTGTACTGTTTAACTGAAAAGCTTAGCGCAAGTTTGCCTTTTTTTAGGTACTTGGATACGCGTAGGGCCGATCTACAAGTAGATATTATCTGTCGATCGGCTTGTATAGTCATTTCTTCTGGAATCTAAAATACTATTGTTTGTTCAAGATCTCCCTCTTTTCTCCTGGAACGTAGAGTTAGTGGCAGTATGAAATCAAAACCACGTGGTTTCAAATTGCAGTTTGTATTTTCTTTTTTTTTTAAAAAAATATTATGCTGTTTTCGATTGTTTTCTGCTGTTCTTACCACAAAGTACTTTACTCAGTAGGGTAAAAGGGCACAATATAGAGATATTCATCTCTTGGTATGTTTAACTAACTGATGTGTGCTTCTTCTTTGATCTTCATTAAGCAGGTTTTCTGAGTTAATGCACAGAATATAGAGAATTTTCCAGTTAATTTGCTTATGAGATCAGTAAACTGCTATGGATATATGAAGCAGAAGTGAAGCTCACACTGTTTCACACTGGTGAATGATCAGTATTTTGTCTGTTTCAGATCTTAGTGTCCCTAGATATGGAAGGAAGAGAGGCAGGCTTATGGTAAGCCCTGGTGAATATTTGTGGGAGGTCAGTAAGTGGTGGCCTGATTAAGACTGCATCAGAGAAATTTGTGGTTATCTTTCTTTACTAATGACGGCATTGACGAGAATGAAGTTCCCAAAGCGCTATGTCATTGTGCTGCTGACATTCATCTGCACAAATGTTTGTTACATCGAGCGTGTCGGATTCTCGATTGCTTACACCGTGGCAGCTGATGCCATTGGCGTGAATCAAGCAAACAAAGGCATGATACTTTCCATGTTCTACTATGGTTATGTCTTATCACAGATCCCTGGTGGATGGGCAGCACAGAGAATTGGAGGTAGACGTGTTCTGCTGCTGTCATTTGTGCTGTGGTCTTTGATATGCGGTTTAATTCCACTAGACCCCAAGAGAGAAGTCATCCTGGTCCTTTCTCGCCTTTTTGTCGGCGTAGCACAAGGATTCATATTTCCTGCCATTCACACTGTTCTGGCACAATGGGTGCCTCCGCAGGAGCGCTCTCGCTCAGTGTCTCTAACAACCTCAGGGATGTACCTTGGTGCAGCCGGTGGCATGTTGTTTTTCCCAAGTTTGGTGAAGCACATGGGAGCTCAGTCAGTTTTCTTTGTTGAAGCAGTGTTAGGTGTAGCATGGTCTGTAATATGGTTAAAGTTTTCCAGCGAGCCACCTCGCACTGACCTTCCGAAAGTGTCAATGCCAAAAGTGGCATCACGAGAGAAGATCAAGGCACAAGCAGGAGGGGTTGTTGCACCTCGCACTGTAAAGATCCCATGGCGAAGGATTATCTTCAGTCTACCAGTTTGGGCAATTGTTGTAAACAACTTCACCTTCCACTATGCCTTGTATGTCCTTATGAATTGGCTACCCACCTATTTTGAATTAGGCCTTCAGCTTAGCCTTCAGGATATGGGATCGTCAAAGATGCTTCCCTATTTCAACATGTTTATATTTTCTAATATCGGTGGAGTGGTTGCTGATCATTTGATTACAAGAAGGATCTTATCTATTACAAAGACGAGGAAACTCCTGAACACCATTGGTTTCGTTGTTTCAGCTGTTGCACTTATGGCTCTTCCTTTATTCAGGACTCCCTCAGGGACTGTGCTTTGTTCATCGATATCGCTCGGTTTTCTGGCCCTAGGAAGAGCAGGCTTCGCCGTGAATCACATGGACGTTGCTCCAAAATTTGCTGGTATAGTGATGGGGGTTTCAAATACAGCTGGGACATTGGCTGGGATAGTTGGTGTTGGCCTAACGGGAAGTATTCTGGAGGGGGCAAAGGCTTCTAACATGGATCTGACAAACTCAGAAACCTGGAAAACAGTCTTCTTTGTTCCAGGGTACCTCTGTATTTTCAGTTCCATCATTTTTTTGATTTTCTCCACTGGCGAAAAGATTTTTGAATAGAGGATGACTATTCTTTTACTTTTAATTTACGGTGAGGCTGGATAGCAATACGGGATTCTTACATGTATCTGTTTGTCATTTGTTATATTTTGGAGTTAAGATTGTATCCCATACATCCTTAAAAAACAGTGCAGAAAGGATTGCACATTTTTTGTAGTAAATTTATCATTTCTGTAGTCAGTCAAGTTTCTGTTATTCAGGCAGATTGGATGGCATCTTTACAACTTACAAGTGTAACATTATGTATTCTGCTGTCACCTATTCAGGCTTATTGCACCTTTTTGTATTGAAATATGGAATTGTCATGGGCAGAGAAGAAGGTGCAATATGTTCATGCATCATTCTTCATTTGGATTTTGTGAACTGTTTGTTTGAATTGGAAAATCCAGTGTACTGGGTTTATTGCTCAAGAAGAAGCAATACAGTGAGTCCCATACCTTGCCAGGTACTTTCTCTGTTTCGTAATATAAGACTTTCTAGCACTGTCAATATGAAGGTGGACAATGCTAGAAAGTTTTACATTATAAGACGGAGAAAGTAAGAAAGTAAGTACCACTTAACCAGGCTATAACGATGCGGATACTTTCCCCTCTCTGTTTTTTTAATAAAAAAATGAAATCTGTATGGTCAAAAAGATTTATGGTCACAAGTGTCAGTTGATTATACAAGAGTGAAGGAAATATTTCGGTTGATCCTCTGAATTTTCTTCTTAAAATGGTGTAAACTAGGCGTAAAATCTAAGAAAAGGAATAATTTATGCATATATTTATTATTCACAGTTTTTTAAAAAACAATGCTTGAAAATAAATTACAATAAAAGAACAAAATCAGCATTAAATTAAGTTTCGAAATTTAAAATTTGCCTGCGGTTGATGAACAATGATGATACATTTGAAACACGGAACTGTCGTTCAAGATATTTGATCACAAACCCTTATTTTTTATCCAAACCTGAGGGATTTACTTGGTGTACCCTCTATCCCGAAATAATTTTACTTTTATACATGAATCTGGACACGGGCTATATACAGATTCATTAGGTTTATGTACTCCAACTGACATGTGGGGTCACCCACATGTATGTGTGGGTGGGTTTTATGCCGTATAAGCTGCGGGACACCGTTCTTTCCTTCCCCCTTTCGAAACGCTCAAAAACCCTCTCCGACTCTCCCCTTCTCCTCCCACTCTTCTCCGGCGGCGGCGGGAGCGCATCGGAGATGATCATCCCGGTGCGGTGCTTCACCTGCGGGAAGGTAGAAAATCTCCCAGACATGACGTCCTCCACGTATTTTACCTCCCCCACCGTTTCCCATCTAGGGCTACCGGCTAACGACCCCCGCTTCGCCGCCGGCGGAGAAGGCGGCGGCGGCGGCGGGCGGTTGGGCTGCTTTTTCTCTTGCGGTTCCGGCCGATTCGATGCGTTCTCTGATGCCTCCGCGGCTCCGCTGCCGCTACTTCGCGCCTCCTTAGGGCACGCTGCTCGTTAGGGTTTCGGTCGCTTCTAGATTCTGCAGTGCTAGCTTTTGCTCTCGTGAGATTCCCTAGTTGTTTAATTTGTGTGGCCAGTGGTTTGTACGCATGGGATTGGTTCGTTGGTTGGTTGGTTGGATTAGGGTTTAGTGGTAAGGAAGTGCTCATATGTTTTTTCCCCCTTTTGCAGGTGATTGGGAACAAGTGGGATCTGTACCTGGATCTCCTCCAGGCTGACTACACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCCTAGATAGCTTGTGGTCACCTTCTTCCTCATCGCAGCCAGCTTGCTGTTGTAGATCCCATGTCCCTGCCATCAGATCTAGCTCCAGATCCAAGCTGCTGCTGCTTGCTGCGGTTCTTCTCTCTTGCAGTGGCAGTGGAAGACAGCGAGGGGAGGAGAGGCATTGGGATCTAATGGTCGCGACAGAGATGGTCTGCTATGGGGAGGTGGCCGCCAGCTGGCAGATGGAGATGCCGATCTCAGCATGCGCACATGGTGCTCTCCTTCGTCAACTAGCGGTGCATGATGCATTGATGCCTCTTAGGGCACAAGAGATGTGGGGGTATTCAGTTGATTTTGGGCTTTTGTGGGCTGGCAGCCTGGCCTAGTGACTTTTCTCCTTTTCCTTTCTATTTTCTTTGCAAATTTCTCCCTTAATCAATCCTCAGCCACCTCGTATTGCGTCGCCTCGCCTTATGTGTTGCATGCTATAGTGCTGAGATGTACCCTCGTTGCCTTAAACGCCTTAACGCCTTAACAACACTGGTGCAAGTACATATGTATCTTTGGAAATGATATGAGCTGTTATTAGTTTTTGACATGCTTTTGACTCTATCTATGTACATGTTATTAACATACTTCCTATGACTTTCTGTTGTCAGGGATGCTCTGGATGCATTGGGTTTGGTCCGTTACTGCTGCCGGCGAATGCTCATGACCCACGTTGACCTCATCGAGAAGTTACTCAACTACAACAGTAAGTTTTCGCTGCTATAGAAGCTATAGTTTGCTTTCTTTCCTGTTCCCTTATCAAGTGACACAATTTTGAATTTCAGCGCTGGAGAAGACCGAGACTGCAGGTTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA037098