BGIOSGA037128

From RiceWiki
Revision as of 08:34, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA037128| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA037128, complete gene.| tag = OS12G01...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA037128

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA037128, complete gene.

LocusTag

OS12G0194900

Ensembl Transcript ID

BGIOSGA037128-TA

Ensembl Protein ID

BGIOSGA037128-PA

Length

3418

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:5092346..5095763

Sequence Coding Region

5092346..5092403,5092967..5093200,5093319..5093412,5094661..5095243,5095326..5095763

Genome Context

<gbrowseImage1> name=IndicaChromosome12:5092346..5095763 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:5092346..5095763 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGACAGGAGAGCAGTAGTGTATGATGCTGAAGCAGTTGATGATCATGAGAGACAAGGGACGGTGTGGACGGCGACGTCGCACATCGTGGCGGCGGTGGTCGGCTCCGGCGTGCTGGCGCTGGCGTGGACGGTGGCGCAGCTGGGGTGGGTGGTGGGGCCCCTCGTCCTCGTTGGCTTCTCATGTGTCACTTACTACACATCTACCCTCCTCGCCAATTGCTACCGCTACCCCGACCCCGTCACCGGCACAGCCAACCGCGAGTACATCGACGCCGTTCGCTGCTACCTCGGGCCGAAGAACGTGATGCTGTGTGGGTGTGCGCAGTATGTCAACCTGTGGGGTACACTTGTCGGGTACACCATCACAGCGAGTGCAAGCATGATAGCGGTGAAGCGGGTGAACTGCTTCCACCGGGAAGGGTACGGCGCCGGCGACTGCGGCGCGTCGGGGAGCACGTACATGGTGGTGTTCGGCGTCTTCCAGCTCCTCCTCTCCCAGCTCCCCTCCCTCCACAACATCGCCTGGCTCTCCGTCGTCGCCGTCGCCACCTCCTTCGGCTACTCCTTCATCAGCCTCGGCCTCTGCGCCGCCAAGTGGGCCTCCCACGGCGGCGCCGTCCGCGGCACCCTCGCCGGCGCCGACCTCGACTTCCCCCGCGACAAGGCCTTCAACGTCCTCCTCGCCCTCGGCAACATCGCCTTCTCCTACACCTTCGCCGACGTCCTCATCGAGATCCAGGACACGCTCCGCTCGCCGCCGGCGGAGAACAAGACCATGAAGAGGGCCTCCTTCTACGGCCTCTCCATGACCACCGTCTTCTACCTCCTCCTCGGCTGCACCGGCTACGCCGCCTTCGGCAACGACGCCCCCGGCAACATCCTCACCGGCTTCGCCTTCTACGAGCCCTTCTGGCTCGTCGACATCGCCAACATCTGCGTCATCGTCCACCTCATCGGCGCCTACCAAGTGTTCGCGCAGCCGATCTTCGCGAGGCTGGAGAGCTACGTGGCGTGCCAGTGGCCGGACGCCAAGTTCATCAACGCGACCTACTACGTGAGGGTGCCGGGGAGGTGGTGGCCGGCGGCGACGGTGGCGGTGGCGCCGCTGAAGCTGGTGCTGCGGACGATCATCATCATGTTCACCACGCTGGTGGCGATGCTCCTCCCCTTCTTCAACGCCGTGCTGGGCCTCATCGGGGCGCTCGGCTTCTGGCCGCTCTCCGTCTACTTCCCGGTGAGCATGCACGTCGCCCGCCTCGGCATCCGCCGCGGCGAGCCGCGGTGGTGGTCGCTGCAGGCCATGAGCTTCGTCTGCCTCCTCATCTCCATCGCCGCCAGCATCGGCTCCGTCCAGGACATCGTCCACAACCTCAAGGCTGCTGCACCCTTCAAGACTGTCAACTGA</cdnaseq>

Protein Sequence

<aaseq>MDRRAVVYDAEAVDDHERQGTVWTATSHIVAAVVGSGVLALAWTVAQLGWVVGPLVLVGFSCVTYYTSTLLANCYRYPDPVTGTANREYIDAVRCYLGPKNVMLCGCAQYVNLWGTLVGYTITASASMIAVKRVNCFHREGYGAGDCGASGSTYMVVFGVFQLLLSQLPSLHNIAWLSVVAVATSFGYSFISLGLCAAKWASHGGAVRGTLAGADLDFPRDKAFNVLLALGNIAFSYTFADVLIEIQDTLRSPPAENKTMKRASFYGLSMTTVFYLLLGCTGYAAFGNDAPGNILTGFAFYEPFWLVDIANICVIVHLIGAYQVFAQPIFARLESYVACQWPDAKFINATYYVRVPGRWWPAATVAVAPLKLVLRTIIIMFTTLVAMLLPFFNAVLGLIGALGFWPLSVYFPVSMHVARLGIRRGEPRWWSLQAMSFVCLLISIAASIGSVQDIVHNLKAAAPFKTVN</aaseq>

Gene Sequence

<dnaseqindica>1..58#622..855#974..1067#2316..2898#2981..3418#ATGGACAGGAGAGCAGTAGTGTATGATGCTGAAGCAGTTGATGATCATGAGAGACAAGGTATGTGTACATGATGATCAATAGCTAGTTTACTTTGCACCTAATTGATTGATGTAATATTCAGAAGTGCCCAATTAATTGTCAAAAGTTTATTCAAATAACTACTGTCTGAACCCATGCTCATCTCTCTATGTTTTTTCCTCGAAGGCTTTTAGAAGGTCTTTGCATTTGATTGTGAGACATGCATGTGTGGGGGTTGTCATGCATGCATGCCTTTTGCTTTGCACAACATAACAGAATGTTAAGAGGGGAGCTAGGGGACAACCTTTTCTGTTAGCAGAGTGACATGCATAAATGATGCAGGATGTTTGAAAGCTGCAGTTCAAAACATGGTCCATGCATATGCGAAGCACACAGGACCAATACATACTCACATCATTCATCTACCTTTTTAGCTTCTAACTAAAAACCACCCAGTCTTAATTACTGTCAAATTAAATCGATCTGGCCCTACTTGTCGTCATCTCAATCACAAGGAAATTTTGACAGTAATTGCAAGTGTGTTTACTTGAGCTCTCTGCATTGGGTTGATATGAGATGATGATGATGATGGTGATGATCAGGGACGGTGTGGACGGCGACGTCGCACATCGTGGCGGCGGTGGTCGGCTCCGGCGTGCTGGCGCTGGCGTGGACGGTGGCGCAGCTGGGGTGGGTGGTGGGGCCCCTCGTCCTCGTTGGCTTCTCATGTGTCACTTACTACACATCTACCCTCCTCGCCAATTGCTACCGCTACCCCGACCCCGTCACCGGCACAGCCAACCGCGAGTACATCGACGCCGTTCGCTGCTACCTCGGTATAATATATATATCATTATAATAATATTATTGTATTTTTACGATCTATAAGAAGGTACCACGAGTTAAAAAGTGTCTTAACGGTGATATATACGTCAATTTTCTCATGTGTTTTAGGGCCGAAGAACGTGATGCTGTGTGGGTGTGCGCAGTATGTCAACCTGTGGGGTACACTTGTCGGGTACACCATCACAGCGAGTGCAAGCATGATGTAAGTTGCTAATTGCCAATGTTAAGTATATATGCTCGTGCCCTTCAATTAGATTCACCAATCATCATATATAAACGAATGGAAATTGAACTTATTTTACGTACGTCCGTGGAGTACGTGCATGCGTATATACATCAAACTTGGGGCAAATTAACTAATCAGTGCACATTAGAACTTGAATAATTACAGTGACCTGGCATGATTAAGATCTTGATTTAATATCGCTTTAACTTTTTTTCCATCGTGCGTTCGTGCTCACATCCTCCTAAACTTTGTCGGGATCGAAAACGTAGTCGACAAATCAGACAGTAGTAAAAGTGCACCGAAAAAGGTGGCAGAGTATGTGGCTTTAATTAGCAGCCTACATATAGCTGATTAGATTATATTAATTAGGCTACTTTAATTATCCAATCTACGAGCATAACTTCGCCCTGAAACGAGGAGAATCCCTTGCAAGCATCAACGATCGATTTTGGATGCAAATTAACACGCTTAATGCGTGACACATCTTGGTTGGTTAATTAGCACATTCTGCACGTACGTACGGTTGCATGCACGTATCTGGCGTGACACACACATGCATGCACACTTGTCACTGTTGCAATTTCCTAACTACTCATATAGCTCTTAATTGTAAAACTAATCTTGTGATTAGAGAATTATTACTCTATCCAATATTTAGAATAACATTCAATTGCTACTATTAATGATTTCTAAAATATTTAGATTAAAGAAATGATATCCATAAACTTAGCTCCAAAAATATTCTTATAATATTATAAACATATCAAAATTTTATAAACTTACCTTTATTATAAAATTGACGGCCAGAATTTCAAAAGTTTTAACAACCCCCCTCCCCCCTAAATGCCATGTTTGGCAGTAACATCGAGAAATAGTATTGTGGTTAGTGAATTAATTTTTACAAATAATATTTTGAGTTCCTATACTAGTGAATTAATGTTGAGATACTAAATCGAAGCATTAATACACGTCTAATTAAAGATTACTCCCTCCGTTTTAGACTATAAGTCGTTTTAACTTTGGTCGGAACAACATTTTCCATCCAAGACAAATATATTATAACAATATTGTCAATTATAGATTTAATAAAATTAATTTGATGTTACAAATATATATCACTATATTTGTCCATAAATTTGGTTAAATTTAAGTAGTTTGACTTTGATCAAAGTAAAAATAACTTATAATATAGAGAGTAATTGATTAATTAATGGATGGATGCAGAGCGGTGAAGCGGGTGAACTGCTTCCACCGGGAAGGGTACGGCGCCGGCGACTGCGGCGCGTCGGGGAGCACGTACATGGTGGTGTTCGGCGTCTTCCAGCTCCTCCTCTCCCAGCTCCCCTCCCTCCACAACATCGCCTGGCTCTCCGTCGTCGCCGTCGCCACCTCCTTCGGCTACTCCTTCATCAGCCTCGGCCTCTGCGCCGCCAAGTGGGCCTCCCACGGCGGCGCCGTCCGCGGCACCCTCGCCGGCGCCGACCTCGACTTCCCCCGCGACAAGGCCTTCAACGTCCTCCTCGCCCTCGGCAACATCGCCTTCTCCTACACCTTCGCCGACGTCCTCATCGAGATCCAGGACACGCTCCGCTCGCCGCCGGCGGAGAACAAGACCATGAAGAGGGCCTCCTTCTACGGCCTCTCCATGACCACCGTCTTCTACCTCCTCCTCGGCTGCACCGGCTACGCCGCCTTCGGCAACGACGCCCCCGGCAACATCCTCACCGGCTTCGCCTTCTACGAGCCCTTCTGGCTCGTCGACATCGCCAACATCTGCGTCATCGTCCACCTCATCGGCGCCTACCAAGTAATTACCCATCATCGTCTCACTTCCTCGTTAATGGCGGGCGGCGATCGACGATGATCTTATGTTTGATAATTTGCTGCAGGTGTTCGCGCAGCCGATCTTCGCGAGGCTGGAGAGCTACGTGGCGTGCCAGTGGCCGGACGCCAAGTTCATCAACGCGACCTACTACGTGAGGGTGCCGGGGAGGTGGTGGCCGGCGGCGACGGTGGCGGTGGCGCCGCTGAAGCTGGTGCTGCGGACGATCATCATCATGTTCACCACGCTGGTGGCGATGCTCCTCCCCTTCTTCAACGCCGTGCTGGGCCTCATCGGGGCGCTCGGCTTCTGGCCGCTCTCCGTCTACTTCCCGGTGAGCATGCACGTCGCCCGCCTCGGCATCCGCCGCGGCGAGCCGCGGTGGTGGTCGCTGCAGGCCATGAGCTTCGTCTGCCTCCTCATCTCCATCGCCGCCAGCATCGGCTCCGTCCAGGACATCGTCCACAACCTCAAGGCTGCTGCACCCTTCAAGACTGTCAACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA037128