BGIOSGA037254

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Revision as of 08:36, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA037254| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA037254, complete gene.| tag = OsI_380...")
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Gene Name

BGIOSGA037254

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA037254, complete gene.

LocusTag

OsI_38035

Ensembl Transcript ID

BGIOSGA037254-TA

Ensembl Protein ID

BGIOSGA037254-PA

Length

6287

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:9008754..9015040

Sequence Coding Region

9008754..9008977,9010883..9011057,9011259..9011342,9011417..9011658,9011734..9011971
,9012519..9012598,9012673..9012757,9012853..9012984,9013063..9013176
,9014272..9014316,9014562..9014646,9014765..9014824,9014901..9015040

Genome Context

<gbrowseImage1> name=IndicaChromosome12:9008754..9015040 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:9008754..9015040 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGACTCCGCCCGTAGCTGGCTCCAGAAGCTTCAGCCGCGGGACAAGGACAGGGGCAAGCCGGCGTCGCCCACCGCCGCGAGGAAGGACGGAGCGGCGGCGATGGCCGAGGATGGGGAGGAGGCGATCTCGAGCACCACCGCCACCAAGGTGGCGGCCGCCAAGCAGTTCATCGAGAACCACTACAAGGACCAGATGAGGTCGCTCGAGGAGCGCAAGGAGAGGCGTCGGATGCTGGAGAGTAAGCTTGCAGATCCTGATGTATCTGAAGAGGAGCAAAACAATATTCTGAAGGACTTCGAAAATAGGGAGAGAGAAATCATGCGCTCAAGGAGGCACAAAATGGGTGTTGATGATTTTGAATTGCTTACCATTATTGGCAGAGGTGCATTTGGGGAGGTGAGGCTCTGTAGAGAGAAAGCTACATCCAATGTATATGCAATGAAAAAGCTTAAGAAGTCTGAAATGTTACGAAGGGGCCAGGTTGAGCATGTGAGAGCTGAAAGGAATCTTCTTGCAGAGGTTGACAGTGCCTACATTGTTAAGCTTTATTGCTCATTTCAAGACGAAGAGTTTCTATACCTTGTTATGGAATACCTTCCTGGTGGTGACATGATGACTCTACTAATGCGCAAGGATACACTTACAGATGATGAATCTAGATTTTATGTTGCGGAGACAATTCTAGCAATTGAATCCATACACAAGCACAATTATATTCATAGGGATATCAAGCCTGACAATTTGCTGTTAGACCGAACTGGGCACCTGAAGCTTTCAGATTTTGGCTTATGCAAACCTCTAGATAGTAGTAGCTTTCCAAATCTGAGTGAGTTTGACTATGCAGTGGGGAAAAACATTAATCCGTCAATGGATGGTGATAAACTATTAAGTAGCTCTGCTGCTCCCAGGAGGACACAACAGGAACAGCTATTGCATTGGCAGAAGAATCGGCGGATGCTGGCTTATTCAACAGTTGGTACACCTGATTACATTGCTCCGGAGGTACTATTGAAGAAAGGATATGGAATGGAGTGTGACTTGTGGTCACTTGGAGCCATTATGTATGAGATGCTTGTGGGTTATCCACCATTTTATTCGGAAGATCCAATGTCCACATGTAGGAAGATAGTGAACTGGAGAAGTCATCTAAAATTCCCTGAAGAGGCCAAACTGTCACCAGAAGCTAAAGATCTTATTAGCAAACTATTATGTAACGCGGATTTGAGGCTTGGAACAAAAGGAGCACATGAGATAAAGGCACACCCGTGGTTCAAAGGTCTTGAGTGGGAGAAGCTATATCAGATGGAGGCTGCTTTTATTCCTGAGGTTAATGACGAGTTGGACACACAAAATTTTGAGAAATTTGAGGAGATTGCTCCAATGCAAACTTCATCAAAGGCAGGTCCTTGGAGAAAGATGCTTTCCTCCAAGGACACGAATTTTCTCAATTTTACCTACAAAAACCTTGAACTATCAGATGATCCTGAACATCCAGGAATAGCTCAAGTAAAGAAAAAGAATAACAAGCCAACGAGGCGGACCTTTAAATCAATATTGCATGAATTTGCTGATACTGAAGAGGAACCTCAAAGCAGTTCCTTGAACTCAACGCCATCACAATTGGATCAGTTGCCCGAGAGCCTTGAGCCTTCTCCTCACTCTAGTATCTCCTCAGAAGATTCACAGTCGCGGCATAGATAG</cdnaseq>

Protein Sequence

<aaseq>MDSARSWLQKLQPRDKDRGKPASPTAARKDGAAAMAEDGEEAISSTTATKVAAAKQFIENHYKDQMRSLEERKERRRMLESKLADPDVSEEEQNNILKDFENREREIMRSRRHKMGVDDFELLTIIGRGAFGEVRLCREKATSNVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSAYIVKLYCSFQDEEFLYLVMEYLPGGDMMTLLMRKDTLTDDESRFYVAETILAIESIHKHNYIHRDIKPDNLLLDRTGHLKLSDFGLCKPLDSSSFPNLSEFDYAVGKNINPSMDGDKLLSSSAAPRRTQQEQLLHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDLWSLGAIMYEMLVGYPPFYSEDPMSTCRKIVNWRSHLKFPEEAKLSPEAKDLISKLLCNADLRLGTKGAHEIKAHPWFKGLEWEKLYQMEAAFIPEVNDELDTQNFEKFEEIAPMQTSSKAGPWRKMLSSKDTNFLNFTYKNLELSDDPEHPGIAQVKKKNNKPTRRTFKSILHEFADTEEEPQSSSLNSTPSQLDQLPESLEPSPHSSISSEDSQSRHR</aaseq>

Gene Sequence

<dnaseqindica>1..224#2130..2304#2506..2589#2664..2905#2981..3218#3766..3845#3920..4004#4100..4231#4310..4423#5519..5563#5809..5893#6012..6071#6148..6287#ATGGACTCCGCCCGTAGCTGGCTCCAGAAGCTTCAGCCGCGGGACAAGGACAGGGGCAAGCCGGCGTCGCCCACCGCCGCGAGGAAGGACGGAGCGGCGGCGATGGCCGAGGATGGGGAGGAGGCGATCTCGAGCACCACCGCCACCAAGGTGGCGGCCGCCAAGCAGTTCATCGAGAACCACTACAAGGACCAGATGAGGTCGCTCGAGGAGCGCAAGGAGAGGTCAGTCCCCCCGCTCGCTCACTCAGCCTGTTATAGATCGGCTAATCGATCGGGGATTGCTATTGTTCGGAAATGCGCGTGCGCGTTGTTCCTGGGTTGGAATTCGTAGGGTGATCTTCGAACTGGAGCTCCTCAAGGTCGATTTGCTGTGCTCTTTTATTAAACAATTATTATTATGATCTGGGTTCCGAGTTACTTGTTAGGTGGTCACTATAGTAGAATACTTGCAATTTTATGACGGCGCATTAGTTACGTGTTAATAACGCTAAAATAAACCAGGAGTATATTGGGTGGATGGCAATACAGTAATGGGAATATGTAGGATTGTGGAGGGTAAAATGATTCTATTTTTGGCATGATGTTAAATGAGGTAAGGAGATGTGCCACTTGGACTAGAATATTCCCTCCGACTCAAAAAAAACCCAACCTAGGATAGGATAGAATCTATTGACAACGAATCTGGATAAGCGCTTGTCTGGATTCGTTGTCCTAGGATAGATCACATCCTATCCTAGTCTGGGTTTTTCTTTTGAGACGGAGGGAGTAACTTGGAAGGAGGTAATAAAGGGGTCCATTATCTCCAATTTTTTTACTTCCGTGGCCTGGATATATAACCATACGATGTATGTGCTACTGCTTTGCTGATTGACCTGCTCCACAACGAAGTTTCGCCTGAGTGTTCTTTCATAATGATATCTCAATTGTAATAATTTACAGCTTGGACTTGCATTTTGTTAATATACTTAACTGCTAGTCTTCATTCTTTGTTGTTATTTTATCTCTTTTGAGAAAACGGCATATGTAGGACTATTTGTATCTCATCTATTTGCAAAGGTTGACAAACTGCAAGCCTTCTTTTGTAATGTGGCATACACCAACCAAATAGGGTAGGAAGAAACTATGCTTATTAATAAAACCTAAAAGTACCAAAGTTTTGGCAAGAACAAGGGTAAGGCTCAATACTAGAAATGTAAACTTGAACTATATAGCCAACAGCTTCTTTAAATTGCTTTTAGTACCCATATTATATCTCTGGACTGCTTGTAGCCATGCACTCTGTTAAACTAGTTTATACCCCGCACTTTGCTGTGGGATATGTGGATGAATGCATGTTATACATTATAAAAATGATAGATGTATGTGTTTAAATAATGTGAAAAATGATCTGGAGATAATGATTTAACATTGCTTGTATATTGAGTTCTAAAAATACAACAAAATTGTTAATGATATGTCATGTTTGCATGATATTTAAAATACTCTAGATAATAATTGCTAGTGGATGATGATGTGGTACACTTGCATATGATTGAAAATACTCTAGATAATAATTGCTAGTGGGTGATGATGTGACACACTTACATGTTGAGATTTATGAGTTAGTGGGCATCAGCTATATAGATAGTATAGATGTGTACCATTTCATATGGAACTATCACATGACTATACAACCTATCTTCTTAGGTTTCTGAATAATGAAATATAGATGTTGGATTGAACTTACTATAAATCTTCTTGGGGCTTGACTGGGAAGCATTCAGTGTTATTCTCTGCCTTAAATTGTTAAACACAATGCATGTGCAATCCTTGAATTTTATTAATGAACTGTATTAAGATTCTGTCATTTTCGGAAGTGTTCTCTAAGGGAAGATGGTATGCATAAATAAAAATATGTAGCATAAAGCGCTTAACTATTGCATTACAGCATCATAAGAGGCTATTCACAGTTCTCTTATTGCCATTTTTTGTGATTGATATTTGATAACTCTCCAATTTCAATCTTTTTGTATGTTTCAGTAAGATGCTATATATTAGTTTTGGATATACATTTCTGGCGTAGTTTAGATATCATCGAACACCCATTCTTATTTGGTGGTAAAGATATTATGCCAAATTATATTATAGGCGTCGGATGCTGGAGAGTAAGCTTGCAGATCCTGATGTATCTGAAGAGGAGCAAAACAATATTCTGAAGGACTTCGAAAATAGGGAGAGAGAAATCATGCGCTCAAGGAGGCACAAAATGGGTGTTGATGATTTTGAATTGCTTACCATTATTGGCAGAGGTGCATTTGGGGAGGTAAGAAGGGCACTGTTTCTACTCCCTATATTCGATGCAGATATAGTTGACTGTTGTGTCATGCGTAATAAACATCAGTTTCTGCAGTACCTTGAGAAACCTTTTATTATACATGGAGAAAAGAAATCTATTTTTAGAGGCAATATATATGTTCTCTGTTTCTCCTGCAGCTTGCCTCCAGTTTACATTTTTATTCTTCAGGTGAGGCTCTGTAGAGAGAAAGCTACATCCAATGTATATGCAATGAAAAAGCTTAAGAAGTCTGAAATGTTACGAAGGGGCCAGGTAATTCATGTGTGTTTAAGTAATTAAATCAGCTTGTCCAGCAAACTTTTGGTTTTCTAATGTGTTCTTTTCAGGTTGAGCATGTGAGAGCTGAAAGGAATCTTCTTGCAGAGGTTGACAGTGCCTACATTGTTAAGCTTTATTGCTCATTTCAAGACGAAGAGTTTCTATACCTTGTTATGGAATACCTTCCTGGTGGTGACATGATGACTCTACTAATGCGCAAGGATACACTTACAGATGATGAATCTAGATTTTATGTTGCGGAGACAATTCTAGCAATTGAATCCATACACAAGCACAATTATATTCATAGGTAATTCATTGATAATAAAAATTGCATGGCATTCGGTAGCAAATTTGCCACTCCATCTTTGCTATACATTTTCAGGGATATCAAGCCTGACAATTTGCTGTTAGACCGAACTGGGCACCTGAAGCTTTCAGATTTTGGCTTATGCAAACCTCTAGATAGTAGTAGCTTTCCAAATCTGAGTGAGTTTGACTATGCAGTGGGGAAAAACATTAATCCGTCAATGGATGGTGATAAACTATTAAGTAGCTCTGCTGCTCCCAGGAGGACACAACAGGAACAGCTATTGCATTGGCAGAAGAATCGGCGGATGCTGGTATGTTAAAATGCTTTATAGTAGCATTTTGCCTCTTGTCTAATTGCTTAATTCTATATGCATTCCCTAGCCAGGGCAAATCCTAGGCCCAAACACGTACAGAGGACATTCTGTATGCATCACAATCATTTGGGCCCTTTTGGATTAGAGGACTTTAAGATAGACCCCTTCAGTGTGGTAGGGATATAAGTTCAGTTTCTATACCTATCTGAACAGAATTGATTAAATTCAATCTATCCAATCTAGGCCTAAACATGCATGCCTGATGTGAAAGTATTCCACATGTTTGCTAGAAGAAGTCAAGTATATTTACGTAATTTTAGCTATTATATGTAAAGCAAATGCATGACGAGATGATTGACTGTACAGTCAAACAGTTCCCATTAGTTCATGATGAAAACGATTACACTGCATTCTGCATAAGATGAAAATGAACACATCCAAAATGTCGATAGAAAATTGTAGAAAAAATGGCATGGTAATCATTTGTTTGCCAAAGAGCCTTGGCAGTGTGTTTTTTATGTATTTACTTTCATGATAATTGCAGGCTTATTCAACAGTTGGTACACCTGATTACATTGCTCCGGAGGTACTATTGAAGAAAGGATATGGAATGGAGTGTGACTTGTTAGTACACTTTAATGAACTTTTGCAGTTCATGTCCTAATGTTTTATATCTCTCTCATATTTGTACTTTATAGGTGGTCACTTGGAGCCATTATGTATGAGATGCTTGTGGGTTATCCACCATTTTATTCGGAAGATCCAATGTCCACATGTAGGAAGGTAACTTTAAATGCTATAGCTAAGCCATGTCCCTTCAAAGACTTGTGGATTTGTATGTGAATTCTTTCTATTAACTTTTGAGTTCAACTTTACAGATAGTGAACTGGAGAAGTCATCTAAAATTCCCTGAAGAGGCCAAACTGTCACCAGAAGCTAAAGATCTTATTAGCAAACTATTATGTAACGCGGATTTGAGGCTTGGAACAAAAGGAGCACATGAGATAAAGGTGAAAGTGGTTCACATGATCTGTTACATCCTTCATGTTTGTAAGTTTGGTAATTTATAGCATGATGTGTTCTTACAGGCACACCCGTGGTTCAAAGGTCTTGAGTGGGAGAAGCTATATCAGATGGAGGCTGCTTTTATTCCTGAGGTTAATGACGAGTTGGACACACAAAATTTTGAGAAATTTGAGGAGGTGAGGTGTCATTACGAAGCTATTTTGGCCAGTTAATGGTTCCAACTTTTTCTCTATACATATTAGAGTACATGTCTCAAGTCAACTTTAAAAACTTTGAACATCAATATCTTATAGAATATTTAGACCATATGTTTAGAAAATATATGCATAGATTTGTCCAAAAGCACTATATTATTTTTATTGTTATTATTTTATTTAGTTTTTCAAATATTTTGCAAGCAAATAGTTGTCAAAGTTGAATTCTGAAGACATATTTGATGTCCAAAATGACATGTTTCATGACTGGAGGGAGCATTAATTTACTGATAGCAGAAGTTTCACATTGTGTGAAGTCCTGAATGTTTCTGCTTACCCTGCTAGATTTTATTTGCATGGTCACACAAGACCTAGGATAGCTAGCACATGTGCTAGGATAGCTAGCACATTTGCTTTCATAACCTCGCTATCGCATGATTAAAAATAATATCTTGATGCAGCAGCCAACAAAAGAAATAGTGTTCATATCACTAAAGCCCTCTGGCCAGAATGGGAAGCACCATCTTATTATTACATATTCCAAAAGCAGAAGCCACGCATCGTTATATTAAGAAGAAGAAAATGAATCTAGAAGACTCAAACATGCCCATTAGGGCAAGGTGTAATACATGACGACTTGCCAAAGAAATAGAAAGGGCCATGGCCGGTGGCCTATACAAACAACATGTACTGCCAAATGTTAGCAAGGCCTTTAGCCCCAGCTATACACCACAACCTGGCCAACCTAATGTAGCAGCAGCCATCGTTGATGAGAGAAACCAAAGCACATCAGCCACCATTTTAGTTGGTAAATGCTACTAAGTTATCAGGGATCTGACAAGAGGGAAATGAGCTTTTTAGCCATTCAGTACACTCTGGGATATTATCATTAGTTCATTTGGCCTTGTTTGTTTGACTATGTCACACCCTTTATTGCATCTAGTGTTGTGTGAAGAAAATATACACTGAGGCGGCAGATATTTGTACATTGGCAAGTCCAATATATTGTGGCTCTTGTAACCTGACTTATTTCATCAGTGCTTACCTAGTGACCTTTGTGTGTTTGGTGTCTTGCAGATTGCTCCAATGCAAACTTCATCAAAGGCAGGTCCTTGGAGAAAGGTGCACTTTTTTGCAGAGATCAGGCGACCATTTGCTTTTAGTTTTTTGTATTGTCAATATATTGGAGGATACATTTTTATTTCAAAATTACTAAGGGTCGCTTCAGGCTAGCGATATTTTCTCTTACTCTTCCTGTAGGACAATGTTTGCATTTGAAATAAAAGTGTGATTCGTCATATTTTAATTACCTTGTGACCTTTTTTTTTTCTGACTCTAGGTCCTGACTAAATGTTTCTATTGTGCAGATGCTTTCCTCCAAGGACACGAATTTTCTCAATTTTACCTACAAAAACCTTGAACTATCAGATGATCCTGAACATCCAGGAATAGGTTGGTTCCTTTCCTAGTCTACTGGCATTTATTCCTTGCAAAACCTTGTAAAAATTGTCTTGGACATAGTTTTGTGCTTTACACATTATTTGTAACCATTTATCTTTTGGCTCTGCAGCTCAAGTAAAGAAAAAGAATAACAAGCCAACGAGGCGGACCTTTAAATCAATATTGCATGGTAAAAGGCTGTAACACAGACTCAGATATGGGATATTGTCATAATATTTACGTTGCTTTCCCCTGACATTTTACAGAATTTGCTGATACTGAAGAGGAACCTCAAAGCAGTTCCTTGAACTCAACGCCATCACAATTGGATCAGTTGCCCGAGAGCCTTGAGCCTTCTCCTCACTCTAGTATCTCCTCAGAAGATTCACAGTCGCGGCATAGATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA037254