BGIOSGA037263

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Revision as of 08:36, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA037263| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA037263, complete gene.| tag = OsI_380...")
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Gene Name

BGIOSGA037263

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA037263, complete gene.

LocusTag

OsI_38049

Ensembl Transcript ID

BGIOSGA037263-TA

Ensembl Protein ID

BGIOSGA037263-PA

Length

6773

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:9170960..9177732

Sequence Coding Region

9170960..9171364,9172506..9172673,9173115..9173426,9173783..9173848,9173920..9173988
,9174102..9174194,9174567..9174769,9176709..9176982,9177487..9177532
,9177572..9177732

Genome Context

<gbrowseImage1> name=IndicaChromosome12:9170960..9177732 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:9170960..9177732 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCACTCCTCGACACCCCCTACCTCGCCCTCCGCGTTCGCCTCCCCCGCTTCCCGACCCCCCACAATCCCAGACCCGCCGTTGCCATCGAAGCCCAGCACTCCTTTCCCCACGGCCTGCTCGCCCGCGCCGCGTGCCAGCCGCTCCGTCACGTCGCGGCTCCAGCGGAGGGGGAGGGGGAAGAGGTAGAGGACCTCGGCACGCCGTCGGCTGCGGCCGTGGCGGAGGCCATCCGGCGTGCTTCGAGCGCGTCGCCGGTGCGTTTCAGGAGGGTGCACCGGGAGGAGAATGAGAAGCTGCGAGGAGAGGGAGGCTTCACGGAGCCCAGCGCCGACTTCCGGCGACTGTGCGGGGAGCAGCTCGAGATGTTCCGGGTGGTCGTCTCCCGCGACGCCGTCCTCTCTGTGTATGTAAGACCTGCTGGCAGTTATATTATGGATCAGCTTGAATTACGTCGAGTTGCTTTATATCCTGAAACTAATGTTTCTAAAGGAGATACAGTGATTCTAGTTGGTAATTTCACCATATCTGCTGGACTAAGAGCAGCGGAAGCTTTTCTTGTAAAACACCAGATGGAAATCATAACTGAATTTGGAGCTGTAGTCCTTCCAATGGTGAAACACCCATTTGTTGTTGGTTTCCTTGTTGCGGAGCTCCCAGAACTAGTTGGATGTACAAAGAACTCCGAGACTTCTGATATTCAGATACCATCACACTCGTTCTTAGACAAGTCATCAGATATAACTCCATATACTAAAGGGGAAGCTTGGGATTTTCAAACTTCTGGAGACCAAGCTAATAGTTATGCTCAGTTAGTTACTGAATGGAAAAATAGTGCACTTATGATTTCTCGAACTTTAGCAATGGCTTATGTCATGGACCAGAAAGCATATTTGCTTCAGCAAGCTTCCTGGCAAAACAATATTAGAATGAGTGGCTTAGTAGAACAGATTCGAGGACCCCTCGCTAATATAAGAGCTCTTGCAAAGATGTTATCAGTTCATACAAAGAGAAATGAGATCTCTTATGATATTGTTGAAGACGTTATGATCCAAGGTGATCATTTGAAAGATGCTTTGCAACAGATTCAAGATGCAGTTTATCTGACTAAGGTGAACATAGTTAGGTACAATGAGGAAACCTTAAAGAAAATTCAGGGGTCACCTTCTTCAAGAACTCTACCACACTATCAATCAGATCCTAAGAATAGTTCACAGAAAGTTGATTCGTTGTCATCACATGATTCTGACAATGGAGACATGGTGATACCCATGCCACCTCTCTGGCTGGCCCCTCTTCAACCCCAAGACACTAGACCATGTGATCTCTCTGTTGTACTGGAAGATTTGGTTGGAGCAGCTCAACCGCTTGCTTTTAGGCAGCAACGCACTCTAGATGTAACAGGAATTTCACACCCGCTTCAAGTTGCTGTTGAGGAATCTGCTTTAAGACAAGCGCTGAGTAATCTCATAGAGGGTGCTCTTCTACGCACTCAGCTTGGTGGCCGAGTTCAGATATATGCTGGTGAAGCACCTGCAGGAGGCATTCTCGTTGTCATTGATGATGATGGTCCTGACATGCAATACATGACACAGATGCATTGCCTTGCTCCATTCGGGTCAGACCTTGCGGATGGATTAACAGTTGCCCGTGAGATACTTGAGAACTATGGCTGTGTTTTGCGTGTGATATCGCCTCGGAGACCTGATGCAATTATAGGGACTGGAGGTAGTCGTATTGAGATATGGTTGCCAACTTCACAGACAGAACTATCTGAGATCACTGAAGGAGCTTAG</cdnaseq>

Protein Sequence

<aaseq>MPLLDTPYLALRVRLPRFPTPHNPRPAVAIEAQHSFPHGLLARAACQPLRHVAAPAEGEGEEVEDLGTPSAAAVAEAIRRASSASPVRFRRVHREENEKLRGEGGFTEPSADFRRLCGEQLEMFRVVVSRDAVLSVYVRPAGSYIMDQLELRRVALYPETNVSKGDTVILVGNFTISAGLRAAEAFLVKHQMEIITEFGAVVLPMVKHPFVVGFLVAELPELVGCTKNSETSDIQIPSHSFLDKSSDITPYTKGEAWDFQTSGDQANSYAQLVTEWKNSALMISRTLAMAYVMDQKAYLLQQASWQNNIRMSGLVEQIRGPLANIRALAKMLSVHTKRNEISYDIVEDVMIQGDHLKDALQQIQDAVYLTKVNIVRYNEETLKKIQGSPSSRTLPHYQSDPKNSSQKVDSLSSHDSDNGDMVIPMPPLWLAPLQPQDTRPCDLSVVLEDLVGAAQPLAFRQQRTLDVTGISHPLQVAVEESALRQALSNLIEGALLRTQLGGRVQIYAGEAPAGGILVVIDDDGPDMQYMTQMHCLAPFGSDLADGLTVAREILENYGCVLRVISPRRPDAIIGTGGSRIEIWLPTSQTELSEITEGA</aaseq>

Gene Sequence

<dnaseqindica>1..405#1547..1714#2156..2467#2824..2889#2961..3029#3143..3235#3608..3810#5750..6023#6528..6573#6613..6773#ATGCCACTCCTCGACACCCCCTACCTCGCCCTCCGCGTTCGCCTCCCCCGCTTCCCGACCCCCCACAATCCCAGACCCGCCGTTGCCATCGAAGCCCAGCACTCCTTTCCCCACGGCCTGCTCGCCCGCGCCGCGTGCCAGCCGCTCCGTCACGTCGCGGCTCCAGCGGAGGGGGAGGGGGAAGAGGTAGAGGACCTCGGCACGCCGTCGGCTGCGGCCGTGGCGGAGGCCATCCGGCGTGCTTCGAGCGCGTCGCCGGTGCGTTTCAGGAGGGTGCACCGGGAGGAGAATGAGAAGCTGCGAGGAGAGGGAGGCTTCACGGAGCCCAGCGCCGACTTCCGGCGACTGTGCGGGGAGCAGCTCGAGATGTTCCGGGTGGTCGTCTCCCGCGACGCCGTCCTCTCTGTAAGCTATATTTTCCCTATGTATTGATAGCACTATATAGGTTTGCTTGCTACTCCTACAGTCTTGTTCTGCTCAAAATAAGTCACATATGAGCAATATAGTTATTAGATGAGAATAGGTACTACCATCTTATGTTATTTTAAGGAACAAAAAGTACATCGAAACATTGGAGAACATATAATAAGGTAAGGATGACAACAAAATGATATCAGGAGTCCAGGATGGTAATATCCAGGTCCAATTGTGCTTATGTGCACAACATTTGTTCATGAACAGTTGATGATTAAATTTAACTGAATAATAATTATAGTAAAATTCAGAAAACCACAAGTTTTATAGTTTAAGTTGCAGAAAACCACATGTATATTCTGACTTGTGGCATATAACCACAGGTTTTATGGTCCTTATGTTTCATAAAACCCACCTTTAGACAGATCTCGATTAATTTCAATATATCTGAAACGATATTTTGCAAATTAGTGAAGAGTTAAACTATCAACCTTAGTCAAGAACGCAATAATTATAAAAAATTATATGCACTCTATATTTTAAAATTTTAAGTAATTAAATCCATAGTCAACATGCATCGAGGTTTTGTGAAACTTTAGAACCATGATGGCTGGGGTTATGTGCCACCAGTCAAAATACCAAGGATTTTATGTAAGTTTCACCGTAAAATATGTGGTTTCGTGAAATTTACTCTAATAATTAATAAGGAGTGTAGAAGTTTGTTTTCTTCTAGACTACGTAGAAAAGGTTTTGAAGTGCATCCCCTTCTTCTTTCAAAAGGAAATGTAACTGCTATATTTTCATTTGTGGAAATTTTCTATTAGCCCCAGCAAATGACACTAGGATTCCTCAGCCCACAAAAATGGAGTAGCAAAGTGTTTGTGAGTGCCAACAGTTTTCATGTTTTTTGTAGCAAATTCTGAATTTCATCCTTTGGAGGTGTAAAGTATGAGAGCAAATAACTAGTTCCGCGATTAATCTGAAACAATCATGTCACCATTTGTTTCGTTTTTAGCTTATCTGCCATTTAGATGAATAAATTCTTTTCTTGTTAGGAATTTATTAGGTGCTTATTTCAACCTATGTGGTCATAAATTAATAAAGAAAATGTTTTTATCTATTTATTTTGAAGGTGTATGTAAGACCTGCTGGCAGTTATATTATGGATCAGCTTGAATTACGTCGAGTTGCTTTATATCCTGAAACTAATGTTTCTAAAGGAGATACAGTGATTCTAGTTGGTAATTTCACCATATCTGCTGGACTAAGAGCAGCGGAAGCTTTTCTTGTAAAACACCAGGTAAATTATTCATTGCCTTTTAATCCACATGGTACTTTTCATAGTTGTAATACTGCCAATGAAGCACCTTATTTCGTTTAAGAATTGTATTGATTGGACAAAAGGTTAATCGAACACCTGACCTCATTCTTGTCACCACATGTGCGGATGTGCCTATGAACCAATGCAGAGTTCACTTGTGCATACAGCGGGAACAACATTATTTACCATTTATGTGGGTTAAAACTTAGTGTATAGACTTGTTTTAGTAAATTATTTATTTTTTAATCAACTCAACATGCAACTGGCAAATAGTAGGGCAATGTTAGCGTTAAAGAGATTGTCAGGCCACACCTGCTCATCCAGTTTTAGTTACAGCAGCTATTGAGCTTTCAAGTTTAATCATGTCAGTTCTTCCTATTTGTTTTAATTTCATTGATTACTATATCTCATATGCTGCAGATGGAAATCATAACTGAATTTGGAGCTGTAGTCCTTCCAATGGTGAAACACCCATTTGTTGTTGGTTTCCTTGTTGCGGAGCTCCCAGAACTAGTTGGATGTACAAAGAACTCCGAGACTTCTGATATTCAGATACCATCACACTCGTTCTTAGACAAGTCATCAGATATAACTCCATATACTAAAGGGGAAGCTTGGGATTTTCAAACTTCTGGAGACCAAGCTAATAGTTATGCTCAGTTAGTTACTGAATGGAAAAATAGTGCACTTATGATTTCTCGAACTTTAGCAATGGCTTATGTCATGGACCAGGTAGTTTGTTCATGACCATTAGATAATTTTTATTCAAAATAAAATCATTCATTAACTTTTTTGACTGGAATCATTAACTGTTGCCAGCCAATGCCTATAACCTTTCTTGTAGACACATATTATTTTGGAATTTGGGAAAACATGCAATTAGGAATGCAGTTTTGAGGCATCCCCTTTGATATACAGCAGGCATATGTGAAATATTTCCTGATGTTTTATTTATAAAACATGGGCATGTGTAACAGATATGCTCTTGATAAACTGAAGAAAATATTCCATAACTGAATTCCTCGCCTGCTCTAGTTTACATTACTAGTTATATATTTTGGTTATTCACATAAGTGCATTCCTCGCAGAAAGCATATTTGCTTCAGCAAGCTTCCTGGCAAAACAATATTAGAATGAGTGGCTTAGTAGAACAGGCAAGTTTTTAACTTCAAAGTACCAACTGAAAAACATCATAGTATTCATCTTACAAGAATCCCTTTGGCAGATTCGAGGACCCCTCGCTAATATAAGAGCTCTTGCAAAGATGTTATCAGTTCATACAAAGAGAAATGAGGTATGCGGATCAATTCTCATTAAGCTGTTCATTGTTTTTCACTTTGTTTAAATAAATCTTGAAGTTGTCTTGGACGCTTTCCTGGTTGGGTATCCTAATTTGATTTTTTGCAGATCTCTTATGATATTGTTGAAGACGTTATGATCCAAGGTGATCATTTGAAAGATGCTTTGCAACAGATTCAAGATGCAGTTTATCTGACTAAGGTAACATTGTAATGACATTTCATAAATCACTGACAAAACTGTGTGCTCTACTTAAATACACCTCTTTCTTATTAGCTTGGAAAATAAAAAAAATAAGAAAGTACTGCTATTAAACGTTAGGCTGGAAATGGATACCAAGGGTAATGGGGTACATATAGGGATGCAATGGGAAAAGTGCCTACAAATGGGAACAAAATTAAGTGAAAAGTGAACCATCAGTTCAGTGGTGTAGGCCAATGAGCAGACCTATGTACATCCCAAATGATAAAACTTAATTAAGACAATGTTTTAGCATACAAGGATAATTCCATTATCTCTTATGATTTTTCCTCACGTATCCCTAAGTGAATTTTTGTCATGTTATCTGAACAGGTGAACATAGTTAGGTACAATGAGGAAACCTTAAAGAAAATTCAGGGGTCACCTTCTTCAAGAACTCTACCACACTATCAATCAGATCCTAAGAATAGTTCACAGAAAGTTGATTCGTTGTCATCACATGATTCTGACAATGGAGACATGGTGATACCCATGCCACCTCTCTGGCTGGCCCCTCTTCAACCCCAAGACACTAGGTAACAGTTTGCTTCAATTTGCCATTCCAAGATGTTGAACTCTCAGTTACATAGTAGACTAATTTCATGCGTTGAATGCTTTGTTTACCAAGAAATTGTTGTAGCTGTGATTTACTTGTAGTTCAGTTTTAGTTATTTCAAAATAAGTGTAGTCTATCACAGACCAATAGCTATTGATTACCAATACCCAATGCATAGTGTCACTCCTGTTTTCAGTAAAACTTATTTTTGTCATAGTTTTCATGTGCTTCTAAAGTACTCCCTCTGTCCCAAAATATAACAACTTTTAGCCTTTAGAATTTGCCCCAAATTATAACAACTTCTCCACCAACATTCCCTTCTCAACCAATCACAACCCACCATGCAATTTTCCCACCTACCTCCACTTCTCAACCAATCACAATCTTCCACCATTTAATTCTAACTAATTCTTAATAACCGTGTCCAACTCTAAAACTCCTTGTATTCAGGGATGGAGGTAGTAGTTGTTTGCACAGATTATTTTATGCTGGACCATTTCTTGTGTAATAACTATTTTATTGTTTACTGAAATAAAAATGCACATAACATTTCAATGGTTTCAAATAAATCTAGCTGTTGGGTTCATGAAACATCATATCCTAGTTATTCTACACTATTCCTAACCATGCTTATATTTCAATATTTGAGAAAACCATAATACTCTAAATTTCATGGTCTGTTTTTCTGTACTAGCAAAAGTTCTATTGTGGTACCATGAATATCAAGTAAATATTACTGTACATTTCAAGTTTATGTTATCTTAATTGCCAGAGTTTCAGACTGACAAAGTTTTGCATTTGAGATCCATTACAAAGGTAGAAGGATATTATGCAAAACATATGTGAAATCTAAATCCATTGTACTATGCAAATATGCAACTAAAAAGGGAACAGGAAAGCATGTAGCATTGAAATTAAGTGGAGAATAAAACCATCATTTTCTTAAAAAAAGATCTACTGATCCAAAGAAAAAACATATTTACATTGACCAAATTTCTGAAAATTTTCATTACATATATCTTGATCAATGCCTATGTTAAACACTACTATTCGCAGTGCTTGTTTTCCGTGCACACGGTTTGTGAACTGCTAAAATCATATTGAGAAGTTGCTTTAAAAATCATATTAATCCATTTTCAAGTTTTTTTAGCTAATACAGTACTGAATTAATCATGCGATAATCCGTCGCTCCATTTTGTGTGCTGGAGGAAGTGGTCCCAACGCTTGCAAAAGAACGCGGCCTAAACTGTTCTTTTACCTCAAGCACCAACTCCATGTTTTTGTCCAGAAAAGTTTATTTCTTTTCCCTTACCCAGTTGAATCGATTTAATTTTGGTCTCTCAACTACAAAACCAGACAAAACTCATCTCCTAACTCTTAAAACTATAAACCAGATAAAAAATGTCCCTCCTACCAACTAGAAGTGGTTTTCACATATGTTGGTGGACAGAAGAAGAAAAACAAAGTCAGAAAAAAGTGGACCATCATCAGTAAAGATTTAAATTTTAAATTCAATTGATGCTAGAAAAGATTTATGTTTTTCTGACATTCTTTGTTCTTTTGTGAACTAATTTTTGTTTCATCTGTGTCTTCTTGTTTCACAGTGTTGATCAAGACAAAACAATCGTCCATCTTGTCCCTTCCCATAAATCTTTCTTTTTGCATTTGATTTATTGGGGTGTTTGTATGAATAGTATATATATTGAAAAAAATCACTTTTATCGATTTGGATAGTGTTGGGGTATTTGCTCTTTTGAGGACCTCATGTCGCCCATGTCCCGTGTACTTGTATGTCAGTACTTTATTTGTTTACATCTCAAGTTACCATATTTTTAATTGCTTGAGTAAAAAATAACTTAGATGTTAGTCCCCAACAATTCAATTGTGCATTATTTGTCACTTTATTTGTTGTCAGGCAGACCATGTGATCTCTCTGTTGTACTGGAAGATTTGGTTGGAGCAGCTCAACCGCTTGCTTTTAGGCAGCAACGCACTCTAGATGTAACAGGAATTTCACACCCGCTTCAAGTTGCTGTTGAGGAATCTGCTTTAAGACAAGCGCTGAGTAATCTCATAGAGGGTGCTCTTCTACGCACTCAGCTTGGTGGCCGAGTTCAGATATATGCTGGTGAAGCACCTGCAGGAGGCATTCTCGTTGTCATTGATGATGATGGTCCTGACATGCAATACATGGTAAGTACATTTGTTCTTTCATTTGTAAGGCTCTTTAGTGTTTCATAATGTTTTTTTAGATAATGGAAACTTTATTGTCCTCTGCATAACTAAGATGCACACAGCCAAAACACACACCCACTCTAGTTTGGAAACAAAAGAAAACATAAAACATAGGGAGAATTATGGGACATCAATCCAATGTAATTATGACTTTTCATCAGTGTGCCAAAGAATTCCTTTGGGACAACAATACAAGAGCATCTCATTCAAACTATTGTGCAATGTACTAATAATGAAATATAGTGTTGGTTTTCAATTTTCTAGTGAAACCTAAAGTTAACTGATGGTCACCAGATTGAGATATTTTATTTTAGATGCGATATTTTGGAGGCCTAAATTTGTTTGAACTTTGGTTCACTTGCTTGTATTGCTTCAAGCACTGTAAGAATATTTTCATGTCCAGCAAAGTTTTTATTTATCATTGACAATTGGTTCAAATTTCTGATTTCTATCATTTTACAGACACAGATGCATTGCCTTGCTCCATTCGGGTCAGACCTTGCGGATGGTATGCATGAAGATAATATGACATGGAATTTCATTGCAGGATTAACAGTTGCCCGTGAGATACTTGAGAACTATGGCTGTGTTTTGCGTGTGATATCGCCTCGGAGACCTGATGCAATTATAGGGACTGGAGGTAGTCGTATTGAGATATGGTTGCCAACTTCACAGACAGAACTATCTGAGATCACTGAAGGAGCTTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA037263