BGIOSGA037316

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Revision as of 08:37, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA037316| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA037316, complete gene.| tag = OsI_381...")
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Gene Name

BGIOSGA037316

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA037316, complete gene.

LocusTag

OsI_38148

Ensembl Transcript ID

BGIOSGA037316-TA

Ensembl Protein ID

BGIOSGA037316-PA

Length

8634

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:10833893..10842526

Sequence Coding Region

10833893..10833968,10834080..10834246,10834393..10834510,10835948..10836026,10836622..10836685
,10836818..10836854,10837758..10837843,10841482..10841577,10841679..10841838
,10841928..10842081,10842517..10842526

Genome Context

<gbrowseImage1> name=IndicaChromosome12:10833893..10842526 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:10833893..10842526 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTACAAGCAGACTGCTGATGCCGTCATGTGCATTCTCCTGCCGGATTCAGAGACCGCCGCTTTCAGAACAAAAGGTGGTTTGCTGTACGTTGATGAGTGGAACTCACTCCAGCACCCGGTGGCATCGGCGTTCCTCGCCGCCGTTTACAGCGACTACATGCAGAGCTCCAGGAAGACGGAGCTAAGCTGCAGTGGGCAGGGCTTCTCGCCGAGCGACCTGCGCAAATTCGCCAAGTCCCAGGCGGATTACTTGCTGGGCAGCAACCCGATGAAGATTAGTTGTCTGGTCGGGTACGGCGACCGGTACCCGGAGCGGGTGCACCACCGCGGCACATCTATCCCGGAGGACGTCGACACCGGAATGGATCTTATAGAATCCTATGAAATTCCTATGGATTGCCTAATACCATGCAAGTTTTGGAGGAATTCTAACATGAGGTTATTGATTAGACGCTTCGGGGTCGCGGAGATGAACTGCGAGACCTGTCAGCTGAAGGAGCTGGAACTGGAGCCTCGGGAGATCAAGGATGTGCTACGATGCATTTTGCACACCATATTCTTCCACAGAACCTTGAGCCTTGTTCGGCCCAAAGATGTTGATTGTGATTTCTTTGAGATTACCTATGTACAATGTGGACTTCCTGAATTAGAAAAGGAAGTTGATGAAAAGATTAACCAGTTTGTTGCGTGGGTAGAGAAACATCCAAATCGGAGCAGTCAGGTTTGCCTCTCCTTTTTCGATGAGAAAAACAAACTCCCAAGCTGGTTTGGCAACAAAACAGAGCGTATTTATTGGGAACAGTGGTTCATAAATTTGCATGTAATAAGCCCAAAAAGGCATGGCAAATCACATAGCTCTAAAGCACTAACAAATATTGGAGGGCAAGCATTGGAAGAGAGTAGCTCAAGACGTGCTGCCTTGGAATCATCAATTCATGAAGTACTATTCCAGATCATAAACTTTGCCAATGAGAAAAAGGACCATATTCCTCCAATCCCTGATAGAATATTCAATCATGAGATCTCCATTCCAAGTACCAATTGA</cdnaseq>

Protein Sequence

<aaseq>MYKQTADAVMCILLPDSETAAFRTKGGLLYVDEWNSLQHPVASAFLAAVYSDYMQSSRKTELSCSGQGFSPSDLRKFAKSQADYLLGSNPMKISCLVGYGDRYPERVHHRGTSIPEDVDTGMDLIESYEIPMDCLIPCKFWRNSNMRLLIRRFGVAEMNCETCQLKELELEPREIKDVLRCILHTIFFHRTLSLVRPKDVDCDFFEITYVQCGLPELEKEVDEKINQFVAWVEKHPNRSSQVCLSFFDEKNKLPSWFGNKTERIYWEQWFINLHVISPKRHGKSHSSKALTNIGGQALEESSSRRAALESSIHEVLFQIINFANEKKDHIPPIPDRIFNHEISIPSTN</aaseq>

Gene Sequence

<dnaseqindica>1..76#188..354#501..618#2056..2134#2730..2793#2926..2962#3866..3951#7590..7685#7787..7946#8036..8189#8625..8634#ATGTACAAGCAGACTGCTGATGCCGTCATGTGCATTCTCCTGCCGGATTCAGAGACCGCCGCTTTCAGAACAAAAGGTAAATTCCATGATTCAGAAGCTTAAAAAAAACAATCTCAGGTTCACCATTTGTGTAGCTGGTAATAACAATGCACTAGTAATTCAGATGGCTTGCAAAATTTTATTTCAGGTGGTTTGCTGTACGTTGATGAGTGGAACTCACTCCAGCACCCGGTGGCATCGGCGTTCCTCGCCGCCGTTTACAGCGACTACATGCAGAGCTCCAGGAAGACGGAGCTAAGCTGCAGTGGGCAGGGCTTCTCGCCGAGCGACCTGCGCAAATTCGCCAAGTCCCAGGTAGTAACAAGATTCAGAATTGTCCATGATCCAGAGTTCACAATTGTTCAGACTAACATATGTTCAGAGAGAACATAAATGTTAAGAAATGCAGTACGTAACTTAGATGTGATCACGCACTGATCAGTGATCTTTGTTCTTGGCAGGCGGATTACTTGCTGGGCAGCAACCCGATGAAGATTAGTTGTCTGGTCGGGTACGGCGACCGGTACCCGGAGCGGGTGCACCACCGCGGCACATCTATCCCGGAGGACGTCGACACCGGTGCGACAGCCACAAGTGCAGTGGTGAAGCAGGATTTAGAGATGGGGGTGCCATCTCTAACTCGACATTGTAGCGTTGATGTATGATCGCTAACTCAACATCATACATGTTATAGCGATTAGCTAGAAGAGAGAATGAGAACCCATAGATTATAATTTGCCAATTTAAACAGTTTGTTCCATGATTTTAATTGGAGTCTTGCAATCATTTTTAAAATGATAAATCAGTTAACTAAGTCATTTCATAAGTCCTATATATATAGCTAGGCAGTTATTCTATATAGTTAGTCTCATCTGCAACTAATGATGTAATTAATGGCTAGATTATAAGGGCTAATTATCCTTGGGAGAAGAGAGGGGAGGGGAGGTCACATAGGGGTTAGGGGGTGTTGGCCCTCCCTGGCCCCTACGGTGGCTTCGCCACTGCACAAGTGGCTGGAGACGTCCAAGCCTAACCCAAACGTCACCACCGACGCGCTCGTCGGCGGTATGTACAAGAACAATAGCTTCGTTGACGAGCGCGACAACGTGATGCACAACGAGGCCACCACCTACAACTGTGCCCTCGTCGCCGGCTTGCTCTCCGCCCTCGTCTCCACCTCCTCCCTCGAGCGGCAGCACCGTACTGCAGGCGGCGGTGGCGGCAGTGGCGGTGGCGGTGGCGGTGGCGGTGGCGGTAGGCGACGCCCCACACGGCCACGGCGCCGTCATCGGCAGCCCGCCTCCTCCCGCGTGCTGCCCCTTCTCCCCGCTAGTCGCCTTGTCCCCATCGGCTGCCGGCACCGCCCCTTCTCCCTTCCCCTTGTCCCAGTTGGCCAGCGCGCCGCCCTTCTCCCCGCCAGTCGCCGCCCGTCGCGCCATCCTCCTCGCCGTCAGCTTGCAGAGAAGTGAGAGAGAGAGATGAGGAAGAGAGAGAAGAGGGGAAAGAGGGAGAAGAGGCTGACGTGGACATCTGACATGTGGGACCCACGTGGATCCCACGCTGACTCAGCCGCCACGTAGACCAAAACCAGGGTCAAAACCACCAAAGGATCTTAGGTGACCAGTTTTGCATAGTTAAGGGACCCCGCATATCTGGTTTTGCGGTTCGAGGATGTTTTTTATCCCGATGATAAGTTGAGGGACCTTCGGTGTACTTTTTCCTTGATTTAATAGGGGTGAAAACGTATAAGGGAGTAAAGTAGACTTATTCGTTTGCTGAACAAAAGAGGAACCACCAATGGGCCTATCTGCTAACTTCACTAGGCCCTGGGCCATTCACTGCATCCAGTCTTCCTCTCCAAATCGGTAGCAAGCAACCCACCACGGCACCACCAGCAGAGAGAGGGCTTTTAACTATTTGCCACTCTTAGGCCCTTTGATTCGAAGGAAATTCATAGGATTTTTAGAGGATTTTATTCCTATAGAAATTTTTCCTATATAGCCCTTTGAATCAAAGGAATGGATCTTATAGAATCCTATGAAATTCCTATGGATTGCCTAATACCATGCAAGTTTTGGAGGAATTCTAACATGAGGTAAAACCTCTTGGAAACTTTCATTTGAGTCTTTATCTCTCCTCAATTCCTGTGTTTTTCCTGCGGTCCAATCAAACGACCATTCCTGTGTTTTTCATGTGTTTTGCAATCCTCTGTTTTACCCTTATATTCCTATCAAAATCCCGCGTTTTTCCTATTCCTATGTTTTCTCATTCCTGTGATTCAAAGGGACCCTTACGGATGTTGCTTAACGGTTTGCCACTAGGCCCAGATATCATAGACACATGAGGGCCCACATGTCATTGACAGGGTGTGGTAAATCATTAATTGCCATGTCACAGTAGTGGCAAACAAGTTAAATTTCCCGCAGCAGTCTTCCCCAGTTCTTCTCCTCGATACATCCATTCATCCATCCATTGCCGGCGAGGCGAGACACACACCAACAACTCCGCCGCCGCCGTCGTCAACCTCGCCAGCCCCGGTAAGCCCCAGAATCGAGTCGGTATGATTCGAGTTTCCACGAGCATATGTTCTGCTCCAGCGGGGCCGTAGGCTACCAAAGCCCCGAATATTTCTGCGGGAATCCGACCGGCTTTCTGAGTTTATATATAATTCGTAATTTCATATGGCTTAGGTTATTGATTAGACGCTTCGGGGTCGCGGAGATGAACTGCGAGACCTGTCAGCTGAAGGAGCTGGTCAGATCCAAATTCCACCACTTTTTATTGTTCTTTTCGTTTTCTTTTTTTTCTTTCATGGAATTATTGGTGTGGTTTTTGTGTTTACTTTTTTTTTTTTTTTTTGCTGTGCTGCTTTGTTTTGGGTCGCAGGAACTGGAGCCTCGGGAGATCAAGGATGTGCTACGATGTGAGTCTTCTCTTCCCCTTCTATATCTCCTTACTTTTCTTAAGGAGTGCCCCTTTGTTTCGATCTGCAGTCCCATGAAATCGTTGTTTTGGGTTGAATTGTTTGTGGACTCAAATATTTCTGTAATGTTGAGAATTTCAAATCATAGTTGGGATGTTGAGTATGTTGCATCCGAACACTTCTTCCTATTTGCATAATGGAAAATTATTGGATGAATGATGTATGAGCAAATGAACAAAGAATTGGATATTTAGTTAGTGTTATTGTTAGGTTACCTATTTACCCTTAGTTATTTACTACCTTCTACATTGGGATTTTTTTTTTGTTTTGCAACATATATATACATATTTGTTTACTGTTGGATGGCAGTACCAAGTTCACAGCCTTTTTGCACCTATGGTTTGTCATGAATTTTGCGATAAGGATTTGTGAAACTAGTGTTTATAGTTCTGCACTTCTGCTGTTATACGGTGTAATTAGATTACGCCATGATCTGATTTCATTAGATACTGTTTGATTTCATTAGATCATGCCGTAAAACAGATGATAACCTAGTTCAAATTCCTTTATGCTTTGAGGTTTGAGCGGCATGGAATCCTGTTATAGTGTTATGCTGTTGCTGGCCACCGCATAACTCAATGAACTTCGCTTTTGTTCAGGCTTAATATTCCGTTATCATTGTTCCACCTAAACAAACAAAGTAATCTTCCATTACACGAGCAATACCCATCCCATTTTGATTACATTGTTTTATCGTTGTTTGAACCAAAACACCACATTAATTTCTTTAATAAACTTCGAGTATATTTGTTAAGTAATAAACTGAGAAGTCGAGAGCAGCTTATCCTTCCTAGCATCATCTAATATATGCTGATTGATATGCTGCTTTTGGCTGTGCTGCAGGCATTTTGCACACCATATTCTTCCACAGAACCTTGAGCCTTGTTCGGCCCAAAGATGTTGATTGTGATTTCTTTGAGATTACCTATGTGAGTATTTATCCTGTATAAAGGTCTTGAACTATTTAATGTACTGAATCTATTTGGGTTTTCTATCTAATGTTTGCTGGCACTAAGCACATTTCATGGCTAGCAAATGAAGTATGAAATTTATTACCAACTGCAATTGTCTAGCAAATGAAGTATGAAATTTATTTCCTACTGCAATTGTCTAGTATTTGTAGCAGTGAAATATAGCTTAGCAATTCGAATATCCTATCTGTGCTTTATGTTTGCTGCTGATTTGGTCTTAATTATTGCGATTGTCCACCCTGAACTGTGTAGCCTTGATGTTGTTAACAGTGAGATGTTATCACTTACTCCTATCAGAATAGGAGCTACATGATGTTAAGATATAATTAGATATTTAAGGTCCAGGTGTGACTGACACGTCACTGATGCATAATTAGAGCAAAAGAGCCATGGAAAAGATCAAACCAAAGATAATACAAGATTAATCATAACCATATAATGGTTTATCTTAAATATATATTAGCAATAGTCATGTCTCTTTTATGGATGTAATGCTTTCTATTCTCATTCGCGGTAGCTTCAGATGAGTGTCATGGCACTTGTTTATGCCTTGAGGCACGCAGATAGCTTTTGGCAAGCTGTATTACTTCTTAACCATTATGAGCTTACTGTGTGTATTGATAAACTACTTTTTAGTTAATTGACTGAAGAATTCTGCAAAATCTTTAGGATATAGCCATGTTTTCTATTTTTAGCTTGAATAACCATATAACCAATTCTAATTAGTGACACCTGCTCTATGGTTGCTGATCACCATAAAAATTATATCCAGAGAAGTTCTGAATTGTTGCATTAGACACCTCTCTCATTGTCTCGTTTTATTGTATTGATTTATCTGCATGACCCAACTCTGACCATGAGGTGGTTCAGCCATCCAGAGCACATGCTTTGGTTTATTATGACCTTTACACCATACGACCTAATGACCTAGGCTAAGATAACCCAATGCATATCCTCCATTACATCCACCTTCATGTCAGGCCAAGACTTTGTCTCATGCTTCTGGCCCATTGTGTCATTCAGGCCACTCTATTGACTGATCCACACATGTACTCCCTCCGTTTTTTAATATATGATACTGTTGACTTTTGTTACAACCTTTGACCATTTATTTTATTCAATTTTTTTTGCAAATCTTAAAAATATAAGTAATGCTTAAAGTTCTTTTAGTGATAAATCAAGCCACAAAAAAGAAAAAGACATAAGCTTAAATTTTTTTGAATAAGTCGAACGGTCAAACATGATATAAAAAATCAACAGGATCATATATTAAAAAGAAAAAATGGAGGTAGTATAATGTAGGTACAGGCCAATCCATGCTGTGCCACTCAAAATTACAAATGCCATTAAATGTCATTCACTCCAAAATCTGAAAATTCTCAGCTCAAATTTGCATGGTGCATGTTACAGACTATAGCTTATTATCTGCACCCAACTGGCTTTTTTTCTGACAAAGCCATTACTGGTGTTATATTATACTCTCGCTCCATTCGCAATTGATCATCCCATTACGTTTGTGCAGCGATACCAAGGAAAAATAAATCAAGCATGTAAGCCACAATGCTGAGTGCCAGTTCAGTGGCCCGCGCGCATGGCCAATTAACTTTGCGGGTGGATTTAACTAATCTCGCAATAATCACTCAGCATTAAATTCATGCATCATGCAAGCAATAAAAAAGGAGCGACGGTTTAATTAATCCCCGGATAATCTCTCCGCATTAAATCCATGTGCAGATGCATGAGATAAAAAGAGAAATATGCTGGCTTCCAACGTTGTGCAACAATAAAACCAGAATTTTTCTTTTCAATATGATGATCAACTGCGAATGGAGGGAGTAGGTAGGAAAAACGTACAGAAGCATGAAAAAAAAACAAAAATGTATGTGGTAAATCTTGCAATACTTTTCGCACCCCCTATGCCCTATTGCCAAGCCTCTTGCACTGTGCCATCAGATCGATGATGATTCTCTTCTCTTCAGAAAACCCTTGCACCCATCAATCAGTATCACCGCATGGATTTGAATTCTGCATTCATGGGTAACCTACTAGGAATCTGGTCAGCAACATGTTTCTTGGTCGACTGCTGACCTGATAAAAATGGATTGTCATTATATTTTGTATAATGTATAAGAACATTTAGAGTATCACTAATAATGAAGTGTCTATCCAAAACCTAACTATCCATGTAAAAGATTTCATGCTGCCTTTCACATTTTGGTTTCAGTTTCACTGTGTAACATTTACAAACATTGGTACGAGCTTGTTTTGTTTCTACTTTTAACATAATTGCGAATAGTGATGTTTGGGGCATCCTCCAAGATCTGAATGATTATCTGTTACTGCCTTATGCGTGTCTTATGTGGTCTACAATATGTTTTTGAGAAATATGATAGGAAAGAACCAACTAAGTTAAAAGTGAAGTGTTTAGATTAGATGTTCCTTAAAGGATCATAATCTTATGGCAAATTATGCTACAGGACATTGTGACTTCGTGGTTTTAGCAGTAGGATACCGCACGAAGTGACTTTTGAGGGAAGACACTCTTGAAAGTGGGATATTTGCTGGTGGACAACGGACAACACACCCATTAAAATAATAATTTTCGGTTGAAGAGGAGAGAGAAATCGTGTGAATGACAAAAAATATCCCTGGAACCACATGTCAGCTCTCCAATCTCTCTTCTCTCTATCCCCTCCTTCCACACTTCTTGGTCGGTTGGCGCGAGTCAGGCCGGTGCTGATCTCTTGATCCAGGCCGGCGCTGCCGCCTCCTTCCGCTCCTCTCTGATCGGCGAGCAGACATCGGCAGTGGGCGGCGTTCATTCTTGGTTCATCGCCCAACGCATGTTGATTCTTGCAACACCCGGTTGGCGAGGGATTCTTGCGACTCCCGGCATAGGAGCTCCCCGATGGTTCTTGCTGCGGTAGAGCTCCTGACGGCAGCAGCGGTGTCGTCCCCAGCAGAGCTCCCGGCGGCACAGGTGTCGCCCGCGGGTTCTTGGAACTAGGCGCCCTGTCGTCCACGACAATTCTTGGCACGGCGGAGCTTCGGCGGCAGAGGCGGTGTCAACTCCATGGGTTCTTGGCTTGGCGGAGCTTCGGGCGGTGTAGGTTTCGCTAGCAGGGATGGCTGGCCGGTGCAGACCAGTGGTCGCTGCGACAAGTTCCTGTCTTGGCGGAGGCATGAGAGACAGCGGAGTTCTTTGTGGCAAGAATGGAGGGGAAAGGAGGACAGTTCTTGGTGGCAAGAAGAGAGATGGGATACCTGACATGTGGAAGGGTATTTCAGAACTTTCACGCAATTTCGGTCTCCTATTCAACCAGAAAAGAATATTCTAATGGACGCGGTGTCCATGAGCTAATTTCCACATTTACATAGTGATTTCCCCCAAAAGTCACTTAGTGCGGCGTCCTACAGCTAAAACCGTGAAGTCACGATATTCTATAGCAAAATTTGCCGTAATCTTATTTGGCGTTGAGGGGATCGGATGTCTACTATTGGTCTAACTTGGATAGGCTGTTTTTCATGGATTCACAAATGCTTCGTTATGCTATGAGGTTCCTTAGATTTATTATTGTTGTTGTTGTTTTGTGTAGGTACAATGTGGACTTCCTGAATTAGAAAAGGAAGTTGATGAAAAGATTAACCAGTTTGTTGCGTGGGTAGAGAAACATCCAAATCGGAGCAGTCAGGTTGCATTTCCCATCTCTTTGTTCTGCAATTTTCCACCTTCAATGCTAGACTTGTATTATCTATTCTCCAATTTAATTAGCATATAAGATGAATATGTCAGGTTTGCCTCTCCTTTTTCGATGAGAAAAACAAACTCCCAAGCTGGTTTGGCAACAAAACAGAGCGTATTTATTGGGAACAGTGGTTCATAAATTTGCATGTAATAAGCCCAAAAAGGCATGGCAAATCACATAGCTCTAAAGCACTAACAAATATTGGAGGTAATTTTACTAAAAAACACTTTCATCATCTTTCACAACGATATCCTTAGTTTCACACTATGGTCACATGTGATGCACCATTACCTTAGGGCAAGCATTGGAAGAGAGTAGCTCAAGACGTGCTGCCTTGGAATCATCAATTCATGAAGTACTATTCCAGATCATAAACTTTGCCAATGAGAAAAAGGACCATATTCCTCCAATCCCTGATAGAATATTCAATCATGAGATCTCCATTCCAAGGTATGTCCTATATATGTCTCATGATAAGAACTGTCCATATTGGTCCTTTTTGTTGAGATTCTTTACATATATCTGGATCCCCAGGTGACACGTTTTCCTTGGACGTGTTGACAGCTCCTCGGATTCTATGTTTGGATGGAACACGGATGTTCTTAGGAGAGTGTTGAATAGTGGGCATCCATACTCCCTCTAGCTCAAGATGGCCAATGCTGCCAGTTATCATCACCTTTAATGCTCATAAGGAACAAAGTTTGTGTACATAATCATGTGCGTATTTCATCTGGCTTGTAAATATTTAGGCTAATTTGGTTCTTAGTTTATCAGTGTCGCACGTTCCATAGAGAAACAGGTTCTGAGTATTTTGCAGTAACATCAGATGGTTCATTGTGACGGGATACCGGTTACTGTCAATTGAAATGTGTATCCCTCTTGCAGTACCAATTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA037316

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA037316&oldid=53621"