BGIOSGA037332

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Revision as of 08:37, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA037332| Description = BGIOSGA037332| Definition = Oryza sativa Indica Group BGIOSGA037332, complete gene.| tag = | tid = BGIOSGA037332-TA|...")
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Gene Name

BGIOSGA037332

Description

BGIOSGA037332

Definition

Oryza sativa Indica Group BGIOSGA037332, complete gene.

LocusTag

'

Ensembl Transcript ID

BGIOSGA037332-TA

Ensembl Protein ID

BGIOSGA037332-PA

Length

4061

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:11739722..11743782

Sequence Coding Region

11739722..11739865,11740557..11740706,11741150..11741283,11741460..11741673,11741875..11742020
,11742192..11742419,11743061..11743291,11743599..11743782

Genome Context

<gbrowseImage1> name=IndicaChromosome12:11739722..11743782 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:11739722..11743782 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTGCTCTGTTTGATCCCAAGNGAGTTCCTGTACCGCACCGAAGATGGCAAGTACAACGACCCCCATAATGCCGCAGTGCTGTGTAGCCAAAACACCCCTTATTTTGGGAGAAACATGGAGCCGGTTGATCAAAAGGATGAGTTGATGAGCCCAGATCCATTTGTTGTGGCGACAAAGCTGTTAGCCAGGAGAGAATACAAGGACACAGGGAAACAGTTCAATATACTAGCAGCTGCATGGATACAGTTCATGGTTCATGACTGGATGGATCATATGGAGGATACCGGACAGATTGAAATCACAGCTCCAAAAGAAGTGGCCAATGAGTGCCCACTCAAATCGTTCAAGTTCCATCCCACAAAAGAACTGCCTACGAATTCTGATGGAATAAAGATTGGTCACTACAATGTCCGCACAGCTTGGTGGGATGGGAGTGCAGTATATGGTAATAATGAGGAAAGGGCAGAAAAGCTCAGGACTTATGTTGATGGAAAACTAGTGATCGGAGATGACGGTCTTCTTTTGCATAAGGAGAACGGTGTGGCATTATCCGGCGACATTCGCAACAGTTGGGCTGGTGTTTCGATCTTACAAGCTCTTTTTGTTAAGGAACACAATGCAGTTTGTGATGCAATAAAGGAAGAACATCCCAACCTATCGGACGAAGAATTGTATCGGTATGCCAAATTGGTCACTTCTGCTGTTATTGCAAAGGTTCACACTATTGATTGGACTGTCGAGCTTCTCAAGACAAAAACCATGAGAGCTGCAATGCGCGCAAATTGGTATGGATTATTGGGTAAGAAAATAAAAGACACATTTGGTCACATAGGAGGACCGATATTAGGTGGGCTTGTGGGATTGAAGAAGCCGAACAACCATGGCGTACCTTATTCTTTGACTGAAGAGTTTACCAGTGTTTACAGAATGCACTCCCTAATACCAAGCACTCTCAAGCTCAGGGATCCGACAGGGCAACCCGATGCAAATAATTCCCCACCATACCTGGAAGAGGAGAGAAGTGTACCAAGGTACAATGAGTTCAGGAGGAGACTATTTCTGATTCCAATAAAAAGCTGGGAGGATCTGACAAGTGACAAGGATGCAATTGAAACCATAAGAGCAATATACGGAGATGATGTAGAGAAATTGGATCTTCTTGTTGGTCTTATGGCAGAGAAAAAAATCAAGGGATTTGCCATAAGCGAAACAGCATTCAACATTTTCATTTTAATGGCATCAAGGAGGCTCGAAGCAGATCGATTTTTTACAAGCAATTTCAATGAGGAAACATACACCAAGAAGGGGATGCAATGGGTCAAAACAACAGAAGGCCTACGAGATGTGATCAACCGGCACTACCCTGAAATCACTGCCAAGTGGATGAAGTCCTCTAGTGCTTTCTCTGTGTGGGATGCAGACTACTAG</cdnaseq>

Protein Sequence

<aaseq>MVLCLIPXEFLYRTEDGKYNDPHNAAVLCSQNTPYFGRNMEPVDQKDELMSPDPFVVATKLLARREYKDTGKQFNILAAAWIQFMVHDWMDHMEDTGQIEITAPKEVANECPLKSFKFHPTKELPTNSDGIKIGHYNVRTAWWDGSAVYGNNEERAEKLRTYVDGKLVIGDDGLLLHKENGVALSGDIRNSWAGVSILQALFVKEHNAVCDAIKEEHPNLSDEELYRYAKLVTSAVIAKVHTIDWTVELLKTKTMRAAMRANWYGLLGKKIKDTFGHIGGPILGGLVGLKKPNNHGVPYSLTEEFTSVYRMHSLIPSTLKLRDPTGQPDANNSPPYLEEERSVPRYNEFRRRLFLIPIKSWEDLTSDKDAIETIRAIYGDDVEKLDLLVGLMAEKKIKGFAISETAFNIFILMASRRLEADRFFTSNFNEETYTKKGMQWVKTTEGLRDVINRHYPEITAKWMKSSSAFSVWDADY</aaseq>

Gene Sequence

<dnaseqindica>1..144#836..985#1429..1562#1739..1952#2154..2299#2471..2698#3340..3570#3878..4061#ATGGTGCTCTGTTTGATCCCAAGNGAGTTCCTGTACCGCACCGAAGATGGCAAGTACAACGACCCCCATAATGCCGCAGTGCTGTGTAGCCAAAACACCCCTTATTTTGGGAGAAACATGGAGCCGGTTGATCAAAAGGATGAGGTACTTCTGTTTACAAATTTTCTTACAGAATTCTAAATTTATAAGTTCTAACAATACAAGTTAATAGCTTAATTAATAAGCACTTATTTCCNCTAAAGTCCAGCGTGGCTCTAAGCATGTAATAGGGATAGTACTGCTAGGGTGTCAGCTAGCCTTACCTAACATGTTTTACTTGCCTGTTTTATACTTGCTTTTACTACATGTTCTGCCACCAACTGCTCTGTACTAAAAAAATAGCCAATCCGCTATGAATCTGGACACACATGGTAGGATTGAATTTTTTATGGAATGAAGGGGGTATATGGTAAGATCGACCAGGACAAATATGCTAAGCCTGATCTAATCTTGGCCTGACCTGATCTATATTTACCAGCTGATTTCAATTTTCATCCCTATTACCTTGTTCAATAGAAAATTAGATACCATATATATTGAATTTAGTTAATGAAAAATAATGGAGTAAAGATCACCAAAAAAAGTGTTTGATTTTTATTTCTTATTTAATATCTAGTTTGACAGTTTGACTTTAAGACTTTATAATGACACTCTTTTTTATGTGCTTGTTAATTTAAAAATAGAACCATTTTCTTTTTAATTAGATCATACTGTTAACAGATGGAAATTTGAGGTACACTTTTAAATCATCAGGTTAATTATGCATAAAATAATTAGCTGTTATTTATCGACGCAGTTGATGAGCCCAGATCCATTTGTTGTGGCGACAAAGCTGTTAGCCAGGAGAGAATACAAGGACACAGGGAAACAGTTCAATATACTAGCAGCTGCATGGATACAGTTCATGGTTCATGACTGGATGGATCATATGGAGGATACCGGACAGGTGAATGCTTGATTTAATTCCTTAATTTGAGAGCCTTAAGTTGTTGAAGTTATAAAAATAAGTCTTCATCTTCCATTGAGAATTTGAAATATATATTGTAGTTACATGTGGCAAATCGGGCGGGCGGGTCAGGTTCGGGTTGGACGGGTTGGGTTACTTTGACCTTCTAGAATATCTCGGGTCGGGTCGGATCGAGCCGATTTCAATATCAACTTTTTTTTATAGTATGTTGATTTGAGTTGGATTGGAAGCTATTTGATCTCGGATCGGGTCAGTTTTGGATCATATCAGGTCGGGTCAGGTCAATTTGATTTTTTGGAAAACGTCATGTCTGGTCAGGTCAGATTCGAGTCGAGTCGAGCAGGTTTCTTGGGTCGGGTTGGGTTCTACCACCTCTAATTGCTAGTTGATATATAATTCAATTTTTTCTTGGTTTCTTCTAGATTGAAATCACAGCTCCAAAAGAAGTGGCCAATGAGTGCCCACTCAAATCGTTCAAGTTCCATCCCACAAAAGAACTGCCTACGAATTCTGATGGAATAAAGATTGGTCACTACAATGTCCGCACAGCTTGGTGGTGAGTAATGCTTAAGGTTTTCTCGAGTTAAGATCTTTATCAAAAATTTATCTTAAGCACAAAGAATGAACTTAAAAAATAGAGACAATCGATGTATATATATAAATCAATGCATATTTGCCCTTAAAAAATGTCGTAATTTTTTTTTTGCAATTTCTATAATTATATATACCAAGGGATGGGAGTGCAGTATATGGTAATAATGAGGAAAGGGCAGAAAAGCTCAGGACTTATGTTGATGGAAAACTAGTGATCGGAGATGACGGTCTTCTTTTGCATAAGGAGAACGGTGTGGCATTATCCGGCGACATTCGCAACAGTTGGGCTGGTGTTTCGATCTTACAAGCTCTTTTTGTTAAGGAACACAATGCAGTTTGTGATGCAATAAAGGTAAGCGAATATATCATCACTATTTTCTATTTGTTTAGTTTTAGGAAGAATATAATTTGCTGTTCTTGACTAGCTTGCCACTGATTGTCTATTTGTTTAGTTTTAGGAAGAATATAAACTGTTATTTACCAAAACATTAATTTGTTTTCTTAATGCTAAAAATATGAAATTTTTTTTTTACAAATGTTGTTTTAATCTCAGGAAGAACATCCCAACCTATCGGACGAAGAATTGTATCGGTATGCCAAATTGGTCACTTCTGCTGTTATTGCAAAGGTTCACACTATTGATTGGACTGTCGAGCTTCTCAAGACAAAAACCATGAGAGCTGCAATGCGCGCAAATTGGTGAGGATACATTAGTCTCATTTTCTCATATTTACCGAAAGAAAAAAAATATAACCATTGATGCGGGTATTACTTTTCCAAGTGGAAATTTNATTTACATCTGCAAATTCAAATTAATTAAATTAGTGAGAATGTGTACAATTTACCTGATATTCTGATTCTTTTGTGAAGGTATGGATTATTGGGTAAGAAAATAAAAGACACATTTGGTCACATAGGAGGACCGATATTAGGTGGGCTTGTGGGATTGAAGAAGCCGAACAACCATGGCGTACCTTATTCTTTGACTGAAGAGTTTACCAGTGTTTACAGAATGCACTCCCTAATACCAAGCACTCTCAAGCTCAGGGATCCGACAGGGCAACCCGATGCAAATAATTCCCCACCATACCTGGAAGAGTGAGTAAACAATTTAGGCTTCGTTTAGTTGGGAAAAATTTTTAGGTTTGGTTGTCACATCGGATATACGGACATATATTTAAAGTATTAAACGTAGTCTAATAACAAAACAAATTACATATTTCGCTAGGAAACTGCGAGACGAATTTATTAAGCCTATAATTAATCCATCATTAGCAAATGTTTACTGTAGCACCATATTATCAAATCATAGCGCAATTAGGCTTAAAAGATTCGTCTCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGTGCTAGAACAAGTATTGTGACCTTATTAAACTACTATGTTGAAATTTATCACAACATACTTTTCAATTTTCAAGAATTCTCGAACTATTATTGGTACTAACCAGATTGAAAATACAAGATTCTCTTACCGAGACATATATCATGTTTGTATGTTGGAACCTTAACTAGCATTTATCTAAAAAACAAGGACATTGCTGCGTACTAGTATAAACAAAAATGTTAAGCAAAAACTGTACTATCCAAGTTAAGTAAAGAGGACATTGTGCTGTGTCTAATGCCTTTTGACAATGATTACACTGAGATTAATATCATTTTCTTTTCCTCTAAATTAAAGTATACCGAGACAGGGAGAGAAGTGTACCAAGGTACAATGAGTTCAGGAGGAGACTATTTCTGATTCCAATAAAAAGCTGGGAGGATCTGACAAGTGACAAGGATGCAATTGAAACCATAAGAGCAATATACGGAGATGATGTAGAGAAATTGGATCTTCTTGTTGGTCTTATGGCAGAGAAAAAAATCAAGGGATTTGCCATAAGCGAAACAGCATTCAACATTTTCATTTTAATGGCATCAAGGTAACATTTAGTTCTAACTAATATTGAATGCTAGACAAAGTACCAATTTTTGTTTAAGCCCTTGCTAAACGTATTAGGCAACAACCGAGAATGTGGCTTAAGCTTATTTTGAGTGATTCAAAATTTACCCAAACCAAAGTTTATTAAGGCAAGAAAATATAACGATGTGACCATTATATATGGGTACATTACTGGTAGATCCAGAATGTTACCAGAAAAAAAAAAGAAGTCAAATGTGGAAGTACTAATTATAGATGATAACCACTCAGTTAAGATATGAATATTAATTTAACATCTCTAAAAACAGGAGGCTCGAAGCAGATCGATTTTTTACAAGCAATTTCAATGAGGAAACATACACCAAGAAGGGGATGCAATGGGTCAAAACAACAGAAGGCCTACGAGATGTGATCAACCGGCACTACCCTGAAATCACTGCCAAGTGGATGAAGTCCTCTAGTGCTTTCTCTGTGTGGGATGCAGACTACTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA037332