BGIOSGA037494

From RiceWiki
Revision as of 08:39, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA037494| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA037494, complete gene.| tag = OsI_385...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA037494

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA037494, complete gene.

LocusTag

OsI_38553

Ensembl Transcript ID

BGIOSGA037494-TA

Ensembl Protein ID

BGIOSGA037494-PA

Length

2703

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:16520230..16522932

Sequence Coding Region

16520230..16520577,16520779..16521393,16521828..16522016,16522174..16522305,16522909..16522932

Genome Context

<gbrowseImage1> name=IndicaChromosome12:16520230..16522932 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:16520230..16522932 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGACTCCACCAACTTGCCGGAGACGACGACTCCGCCGCCGCCGGCCGACGACATGATCAGCGGCCTCACCGAAGACCTGCTGCTGATAATCCTCGGCTTCTTGCCGGCGGCGAGGGACGTGGTGCGCACCTCCGCGCTGTCGACACGGTGGCGCAACCTCTGGACCCTCGCCCCGGCGCTCCGCTTCGACATCGGCCAGCGCAACCTGCGGCTAACCGACGACGCCGAGGCCGCTGCCGCTGGCCGCCTCGTCGCCGCCGTGGACTCCGTGCTCGCCCGCCGCGACGTCGACGCCGGCGCGCCCGACGTGAAGGACCTGGAGATCAACTTCGTGTTCCGATCCGTTGAAAGTGGTCTGCCGACCTCCCTTGCTCCGAGAGGCTTCGCACGATGCGCCTCACGCTCGGCGGCGCCCACCGTCGGCGTCCCGGTCGCCGGCGCCGGCGCCGACGCCTACCGCTCTCTCGCCGACCTGCTTCTCAGCAACGTCTGCCTCGACGACGGCGACGGCGTCCGCCTCTGCAACCTCCTCTCCTCCACCAGCTGCCCTAGCCTGCGTCGGCTGGAGCTCAGCGTCATCACCGGACTAACCATCCTTCGCCTCGACGCCGCCGCCACGCTCGAGGAGCTCCGGCTCATCGGCCTCCGCGACATGGAGCAGATGGAGGTGGACGCGCCGGGCCTCCGGGACCTCACCGTGAAGGGCATCACCGTCCACCTGATGGCGGCGGCGGCGGCGAGGATCGCCGCGCCGAGGCTGCAGGCGCTGGCGTACGAATACAGGCGCTCGTGGGACGACTGCCAGCTGATGGTGCTCGACGGCGAGCGCACCGCGAAGCTCCGGGTACTCTCCCATGGCGACCCCGCCGGCAAGCACAACAACGGCGCGGCAGCGTGGTTCCTGCAGCACTGCGCCGCCGCGGATCGCCTCGACATCGAACTAAAGATGGAATTTGATGAGGAAAAACTCCATGCGGGTATTGAGGATGTGATCAAGGACATACCGAAACTTCCGAATATAACAGATTTGAGAATAACGGTAGCCATGTCCACAGATACCATGGATACACACGCTATCGGGGCAAGCACAACCAAGCTCATTGCAAAGTTTAGTAGAATTGAGTATCTCTCCATTGACATTGACAAAAAGGCCGGTGATTGTACAAATTTTGACTGCAAATGTGAGCAATATAAAGGCTGGAATAACAAGATGATTCCACTAGAGCGTCTTCGGATTGCAGACATACGTAACTTTCTGCCTTTCGATGATCAAATAGAATTGCTGTCTATTGATGTGAACTTCTGA</cdnaseq>

Protein Sequence

<aaseq>MDSTNLPETTTPPPPADDMISGLTEDLLLIILGFLPAARDVVRTSALSTRWRNLWTLAPALRFDIGQRNLRLTDDAEAAAAGRLVAAVDSVLARRDVDAGAPDVKDLEINFVFRSVESGLPTSLAPRGFARCASRSAAPTVGVPVAGAGADAYRSLADLLLSNVCLDDGDGVRLCNLLSSTSCPSLRRLELSVITGLTILRLDAAATLEELRLIGLRDMEQMEVDAPGLRDLTVKGITVHLMAAAAARIAAPRLQALAYEYRRSWDDCQLMVLDGERTAKLRVLSHGDPAGKHNNGAAAWFLQHCAAADRLDIELKMEFDEEKLHAGIEDVIKDIPKLPNITDLRITVAMSTDTMDTHAIGASTTKLIAKFSRIEYLSIDIDKKAGDCTNFDCKCEQYKGWNNKMIPLERLRIADIRNFLPFDDQIELLSIDVNF</aaseq>

Gene Sequence

<dnaseqindica>1..348#550..1164#1599..1787#1945..2076#2680..2703#ATGGACTCCACCAACTTGCCGGAGACGACGACTCCGCCGCCGCCGGCCGACGACATGATCAGCGGCCTCACCGAAGACCTGCTGCTGATAATCCTCGGCTTCTTGCCGGCGGCGAGGGACGTGGTGCGCACCTCCGCGCTGTCGACACGGTGGCGCAACCTCTGGACCCTCGCCCCGGCGCTCCGCTTCGACATCGGCCAGCGCAACCTGCGGCTAACCGACGACGCCGAGGCCGCTGCCGCTGGCCGCCTCGTCGCCGCCGTGGACTCCGTGCTCGCCCGCCGCGACGTCGACGCCGGCGCGCCCGACGTGAAGGACCTGGAGATCAACTTCGTGTTCCGATCCGTTGTTGGCGACGACCAGACCACCGGCGCCGGCCGCTACTAACGATCCTCCTCCCGGTTCGGGCTTATGCGGGAACCGGGGGGGGCTTCCCATGGGACGTTTCGCCGGGGGGAACGTTCGCCGGGTGTGGGTCTCCGCTTCGCCGAGTGTGCCGCGTCGCGGGGGGGCGTTCTCGCTCGAGCTCCCCGCGCTGTCGTCGTCGAGGAAAGTGGTCTGCCGACCTCCCTTGCTCCGAGAGGCTTCGCACGATGCGCCTCACGCTCGGCGGCGCCCACCGTCGGCGTCCCGGTCGCCGGCGCCGGCGCCGACGCCTACCGCTCTCTCGCCGACCTGCTTCTCAGCAACGTCTGCCTCGACGACGGCGACGGCGTCCGCCTCTGCAACCTCCTCTCCTCCACCAGCTGCCCTAGCCTGCGTCGGCTGGAGCTCAGCGTCATCACCGGACTAACCATCCTTCGCCTCGACGCCGCCGCCACGCTCGAGGAGCTCCGGCTCATCGGCCTCCGCGACATGGAGCAGATGGAGGTGGACGCGCCGGGCCTCCGGGACCTCACCGTGAAGGGCATCACCGTCCACCTGATGGCGGCGGCGGCGGCGAGGATCGCCGCGCCGAGGCTGCAGGCGCTGGCGTACGAATACAGGCGCTCGTGGGACGACTGCCAGCTGATGGTGCTCGACGGCGAGCGCACCGCGAAGCTCCGGGTACTCTCCCATGGCGACCCCGCCGGCAAGCACAACAACGGCGCGGCAGCGTGGTTCCTGCAGCACTGCGCCGCCGCGGATCGCCTCGACATCGAACTAAAGATGGAATTTGATGAGGTAATACTTCTGGTTATAAAATGTTTTGACTTTAGTCAAAATCAAATTGTTTTAAGTTTGACTAATTTTATAGACAAATATAGTAATATTTATAATACTAAATTAGTTTCATCAGATCAATAATTAAATATATTTTCATAATATTCTTTTGGGGTTGAAAATGTTTTTTTCTATAAATTTAGTCAAATTTAAAGCAGTTTGAATTTGACCAAAGTCAAAACCAAAGTCAAAACGTATTATAACCTGAAACGGAGGGAGTAACAAAATGGACCATGACTTCGTGTAAATTTTACAGATACTTTGAATTCCATCTTACATGCAATTTTTTGGAAAATTATCGGAAAAAGAAATATGGTACATAGAAATTTAAATGTACTATCGAACACTTTTTGGTTCATGTGAAATTTCATTGCGAATCTCAATTGAATTTGCAGGAAAAACTCCATGCGGGTATTGAGGATGTGATCAAGGACATACCGAAACTTCCGAATATAACAGATTTGAGAATAACGGTAGCCATGTCCACAGATACCATGGATACACACGCTATCGGGGCAAGCACAACCAAGCTCATTGCAAAGTTTAGTAGAATTGAGTATCTCTCCATTGACATTGACAAAAAGGTGAGATCAATTATCATAATCGTCTTGTGGTTTCTTTGTAGAATTTTGTTTCGATGGAAATAACTTTGATTTTTACTAATTAGCTCTAGAAACTAAGTATAATGTTTATGGTGAAAACACCATTTCTCATGTTGTTTTGTTTTGATGCAATTTGTAGGCCGGTGATTGTACAAATTTTGACTGCAAATGTGAGCAATATAAAGGCTGGAATAACAAGATGATTCCACTAGAGCGTCTTCGGATTGCAGACATACGTAACTTTCTGCCTTTCGATGATCAAATAGAATTGGTATGTGTACTAATTGCGAATGCGCCACTACTGGAGAAAATGACTGTAGCATTGCATGAGTTATATGGAGAGACGAGACAGAGAAGAAATGACATGGATGCATATTTATGCATTCCAAGCTGTGGGGGTCGTTGGACCCCTTGTTCTGGTAATGGGAGTAAATTTGGTAGTTTTACTAAATATGAGTGGAAACCATATAAACGGAAACGGTGAGAAGAAAGGATGGAGAAGGTCAATGAGAAAAAGGGGTGGAGAAGGTTTGAAATGCCTCATTAGATATGTTTTAATTATTGATCGATATATGTAATACATATATGAAATATATGCATGTATCTTTGGAGTTGATCGATTATACCTACTCCGTTTCAACAGAGTGAACAAAATTAATGTTATAGTGATTTTGCCATTTTTACCCTTATCGCTTTTAATCCATGTGTCTGTCCACGCCATTCCGCCGCCGAGGCGTGAGGAGGAGCACGGCGCTGCGCATCTCCCTCACGCCGTCGCTGGCCCTGCACCGCCGTGGTGAGAGGTGTGGTTGCGGAGAACCGGTGGTGGTGGTGGTGTTGATCTGAAATTGCTGCTGTTGCTGCTGATCTGAAGCTGTCTATTGATGTGAACTTCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA037494