BGIOSGA037524

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Revision as of 08:40, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA037524| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA037524, complete gene.| tag = OS12G05...")
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Gene Name

BGIOSGA037524

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA037524, complete gene.

LocusTag

OS12G0538800

Ensembl Transcript ID

BGIOSGA037524-TA

Ensembl Protein ID

BGIOSGA037524-PA

Length

4702

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:17113221..17117922

Sequence Coding Region

17113221..17113267,17113885..17113963,17114060..17114218,17114327..17114404,17114495..17114599
,17114795..17114861,17114935..17114996,17115081..17115220,17115426..17115552
,17115631..17115745,17115884..17115972,17116209..17116292,17116533..17116895
,17116976..17117422,17117511..17117570,17117848..17117922

Genome Context

<gbrowseImage1> name=IndicaChromosome12:17113221..17117922 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:17113221..17117922 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCGAATATGTTCGGGTTCTCGAGGAGCCGGATGAGGATCGGAAGATCGAAAGGGCACTCAACAGATCCTTTGGACAGCTCTAAGAGTCCTTCAGGGCTTGTGAAGCACCTCAGCCTGCCTAATGGGGACGACCAAATTACAACGTCAGTGAGTGGCCGTGTAGATGATCTCGCCTTCCGTTGCTCATCTGACACATATGATCTCGACGACCGCGCTTTGGTTAGCTCACGGAACTGGGCTGTCCTTTCTACAGAGGGCAGTAGACCATCACCGCGTTTTGCGCATGCAGCAGCCCTTGTAGGGAGCAAAATGGTAGTGTTTGGTGGCGATTCTGGTGATCAATTGTTGGATGATACAAAGATATTGAATTTAGAGAAGCTTACATGGGACTCTGTAGCTCCTAAGGTCCGTCCATCGCCAAACAGACGTCCGTCAAAGTTGCCAGCCTGCAAAGGTCATTGTCTGGTCCAATGGGGGAACAGTGTTATTCTTGTTGGCGGTAAAACTGAACCTGCATCCGATCGTTTAGCAGTGTGGACTTTCAATATGGAAACAGAGGTTTGGTCACTTATGGAAGCCAAGGGTGATATCCCTGCAGCTCGGAGTGGCCACACGGTGACCAGAGCAGGTGCTACATTGATACTTTTTGGTGGTGAGGACACAAAAGGAAAGAAACGACACGACCTTCACATGTTCGACCTGAAGTCATCAACATGGCTACCTTTGAACTATAAAGGCTCTGGACCTTCTCCAAGATCCAATCATGTAGCTGCACTATATGAAGATAGGATCCTTCTGATTTTTGGAGGCCACTCAAAATCCAAGACCCTGAATGATCTGTTTTCTTTGGATTTTGAGACAATGGTATGGTCAAGAGTGAAAATCCATGGTCCTCATCCAACACCTCGAGCCGGTTGCAGTGGAGTTCTATGTGGAACTAAGTGGTACATTGCTGGCGGTGGAAGCAAGAAAAAACGGCATGCAGAAACCTGGGCTTTTGATGTTGTAGAATATAAGTGGTCGGTATGTGTAGTACCCCCTAGTTCCTCGATTGCTACAAAGAAAGATTTCAGTATGGTTCCTTTGTACCACAGGGACAAAATTGTTCTTGTTGCTTTTGGAGGAAACAGAAAGGAGCCATCCGACAAGGTTGAAATATTGGTGGTACTGCAAAATGAACATTCTTTTAGCAGGCGGTCTGCACCAGATGTAGATCCTTTACTATATGAATACTCTCCGAGCACCAAGGAGCTTGCCGGCCATCTTAACAACTGTGCTCCTTTGTATTCCAATAGTTCTGTTGCAAGGCACAGTCTCGCTTCTACGGTAGAACACCCACCTAGAAGGGAATTACTCTCTGAGCCATTGTTACAGAATCCAAATTTGGGCGCTTCACTCCACAGGCAGTTCCATCAATCAGAAGCGTGCAGTTTAGCCCAAAAACTGCAGAAACCGATCGACGATGACAAGTACGATGACACTGATGATTGTTCTTCATGTCAAGCAAGCACTCCAAAAGAGTATCGAAGCAAGAGAACTGGAACTGATGCGCAGATTGACATGGCCAGAATTTTATCCAGCAAGGAAGAAAATCTGGAGACCACGGGATCAAGTGCAAGAAGGATAGCAAGATGCTCTTCAGACATTAGTCATCTATACAATACAAAAATAGCAGACTTGATCAAAAGAAGCTCTGCACTTGAAGACCAGCTTGCGACTGCCTTGGTGAGCAAAGAACAGGCGGAGAAGAATTTATCGTCGGTCATCAACAGCAGGGAGCAGCTGGAAAGGAGGCTTGCCAATAAGGAAAAAGAAGCTGAGATGCTGAAGGAGAAGATAGCAGGCTTAGAGTTGGCACAAGAGGAGTCAAACAACCTCTCGAACACCGTTCATGCCGATAATGTGCGTCTGGAACGTGAAGTGGCATTCTTGAAGGCCATTACAGATGAGACTCAAAAGGAACTCCATTCGACCCGCCGAGTTTTAGCGGGAGAACAGTCGAGGGCATTCCAGCTCCAGGTTGAAGTGTTCCATCTCAAACAACGGTTGCAGATGGAAGGAAGAGCGGGAACGCCAAAGAACCCTCCTGTTTAA</cdnaseq>

Protein Sequence

<aaseq>MPNMFGFSRSRMRIGRSKGHSTDPLDSSKSPSGLVKHLSLPNGDDQITTSVSGRVDDLAFRCSSDTYDLDDRALVSSRNWAVLSTEGSRPSPRFAHAAALVGSKMVVFGGDSGDQLLDDTKILNLEKLTWDSVAPKVRPSPNRRPSKLPACKGHCLVQWGNSVILVGGKTEPASDRLAVWTFNMETEVWSLMEAKGDIPAARSGHTVTRAGATLILFGGEDTKGKKRHDLHMFDLKSSTWLPLNYKGSGPSPRSNHVAALYEDRILLIFGGHSKSKTLNDLFSLDFETMVWSRVKIHGPHPTPRAGCSGVLCGTKWYIAGGGSKKKRHAETWAFDVVEYKWSVCVVPPSSSIATKKDFSMVPLYHRDKIVLVAFGGNRKEPSDKVEILVVLQNEHSFSRRSAPDVDPLLYEYSPSTKELAGHLNNCAPLYSNSSVARHSLASTVEHPPRRELLSEPLLQNPNLGASLHRQFHQSEACSLAQKLQKPIDDDKYDDTDDCSSCQASTPKEYRSKRTGTDAQIDMARILSSKEENLETTGSSARRIARCSSDISHLYNTKIADLIKRSSALEDQLATALVSKEQAEKNLSSVINSREQLERRLANKEKEAEMLKEKIAGLELAQEESNNLSNTVHADNVRLEREVAFLKAITDETQKELHSTRRVLAGEQSRAFQLQVEVFHLKQRLQMEGRAGTPKNPPV</aaseq>

Gene Sequence

<dnaseqindica>1..47#665..743#840..998#1107..1184#1275..1379#1575..1641#1715..1776#1861..2000#2206..2332#2411..2525#2664..2752#2989..3072#3313..3675#3756..4202#4291..4350#4628..4702#ATGCCGAATATGTTCGGGTTCTCGAGGAGCCGGATGAGGATCGGAAGGTGAAAAATTTGTTCCATGGATTTCACCAATTTGGTACTTTTGATCCAAAGCGAGCTATTTTGTTGTTTGGTGGTTCAAAATTTACTGTGCTTACATGAGGTGGCTTACTGTGATGGGAATCTGGTGGATAGATTAGATTGTACTCTCCCAATTTTGTTACTTTCGATCCAAAAGGAAAAATTCTTTTATTCGGTTTCTTGTGGTCTCAGTACAGCTATTATTTTTGGCAATCAATCAAGGACCTTCACCTGATTTAGTTCATGGCCATTTGCACATTATTCTTGGTTTAATGTTGTAAGTGTGGTCCAGGAACATTGCTGGTGAAGAATGCTTTCTTTTGGTAAACTTGCTATGTTCAGAATGGTAATGCTGATACAGCAAGTCCTATAGATCCATTGTAAATTTGCGGAGCCGGTTAGCTTTACGAAACCCAGTTAACCTACCGGTTTCAGTGATTTCGTCATATGCTATTTAAGTCTCTCTTTTTTTTTACAGTCAAATTTCCTTGTTACATTTTGGTGCTAAATCATATTTACACAATTGATTTGTTGTTACCTCGTTTTCATGTTTGCCTTTCCTTTTAGAATAATCTTTCATGAATTTATTGTTCTTATAGATCGAAAGGGCACTCAACAGATCCTTTGGACAGCTCTAAGAGTCCTTCAGGGCTTGTGAAGCACCTCAGCCTGCCTAATGTGAGCCTTTGTAACTGAAGTGCTTGTCTCTAGTCTTAGTACTGATGTCAATATTTTGGCAACACTTGGATGGTTTAGCACCCACCTTTGTTTCAGGGGGACGACCAAATTACAACGTCAGTGAGTGGCCGTGTAGATGATCTCGCCTTCCGTTGCTCATCTGACACATATGATCTCGACGACCGCGCTTTGGTTAGCTCACGGAACTGGGCTGTCCTTTCTACAGAGGGCAGTAGACCATCACCGCGTTTTGCGGTGAGTACACGTCTGAACTCTAGCTAGGATCAAGTCTGCAGCTTTCATTGATATATCCAGTTATCCACAACTCCACATATGACATATCAAACTCCTGTTTTTAAACAGCATGCAGCAGCCCTTGTAGGGAGCAAAATGGTAGTGTTTGGTGGCGATTCTGGTGATCAATTGTTGGATGATACAAAGGTAATGAGATTTTGACTTTTGTGTGTTGGTAGGGAATTTCACTTGAGCACTACCATTTATTTGTCCACTAACAGTTATGGTATCCATCAGATATTGAATTTAGAGAAGCTTACATGGGACTCTGTAGCTCCTAAGGTCCGTCCATCGCCAAACAGACGTCCGTCAAAGTTGCCAGCCTGCAAAGGTCATTGTCTGGTATATCTCTTGTATCTCACTGCTGTTGGTATGCAAAGGTCACTCTACTTCTTTGTTTTGATCAGTCTTTTCAAGTTATAAGGATACCTTTCCTCTCACCTTTTTTACTTCTTTTAGTAGTGGAACTAGGGACAGAAGAAATATTTATACATGGGACTTATATAGCAAGAACCACTTGCTTCTTTTGATGTCTAGGTCCAATGGGGGAACAGTGTTATTCTTGTTGGCGGTAAAACTGAACCTGCATCCGATCGTTTAGCAGGTTTGATCATACTACTTGGTTCTGCTATATTGGCCACTTCCAGATATGTTACATTTCCTTTGGCTTGCTGCAGTGTGGACTTTCAATATGGAAACAGAGGTTTGGTCACTTATGGAAGCCAAGGGTGATATCCCTGTAAGTTATGAGAAACATCAAGAACTACATTTTATTCAAACGTTCTCATGAACTAACAGAATTATCTTGTGGTACTGTTTGTAGGCAGCTCGGAGTGGCCACACGGTGACCAGAGCAGGTGCTACATTGATACTTTTTGGTGGTGAGGACACAAAAGGAAAGAAACGACACGACCTTCACATGTTCGACCTGAAGTCATCAACATGGCTACCTTTGAACTATAAGTAAGTCATTCTTCCAGGAACCAAGCATTGGCGCATTGCAGGAAAAGGAAGGATTTATAGATTTTAAAACGTAAAAGGCTCGTAGTAGCTAACAATCTATTTGTGTCCTAACTCCCAACTGTCCTAATTTACAAATATCAAGTTTCAGAATTGTTGTTTCAATTAAATTTGCATTCTTTATATTAATTGAACCTCAAAACTGTAGAGGCTCTGGACCTTCTCCAAGATCCAATCATGTAGCTGCACTATATGAAGATAGGATCCTTCTGATTTTTGGAGGCCACTCAAAATCCAAGACCCTGAATGATCTGTTTTCTTTGGATTTTGAGACAGTAAGTTGTAAGAGATTTCTTGTATCTCACAAAGTATTGCTAAAGTAGATTTTCCTTACATAGTTATCTTCTTGTTAGATGGTATGGTCAAGAGTGAAAATCCATGGTCCTCATCCAACACCTCGAGCCGGTTGCAGTGGAGTTCTATGTGGAACTAAGTGGTACATTGCTGGCGGTGGAAGCAAGAAAAAACGTATGTTTCAAGCTCTCAACTTATGGAAATAGAATTGGAAATGAGGTCTATTTCAGTTTGTCTCTGAGAAATCACACTTTCACAAGAATGGTTTATCTTGATTATAGCAGTTTGTAACAAAAAATATCGAATTCTCAGGGCATGCAGAAACCTGGGCTTTTGATGTTGTAGAATATAAGTGGTCGGTATGTGTAGTACCCCCTAGTTCCTCGATTGCTACAAAGAAAGTAAGTTCTTTTCAATCTTGACACTCTTGTTATGGAAATAAATATAATTTTACTAAATCAGTGGAAAAATGCATCTGTTAATGTCAGAACTTTTCTCATAATAGTGATTATATTCCAAAGAAAAACTTAATGTATTTTTCTTCATGGCCAAAGTGAACTTATCATCTCATATTCGCACTAGTTGCCATGTTATCTCATTTCATCTTTTTGCTGAATAAGTAAAAAAAATCATGCAGGATTTCAGTATGGTTCCTTTGTACCACAGGGACAAAATTGTTCTTGTTGCTTTTGGAGGAAACAGAAAGGAGCCATCCGACAAGGTGAAATATCAACACTTTACATAAGAGCATTTCCTTGTATTTAGTTAAAGAGTTGAATCCTAAATTTGAATAAAAAAATGGTCAAAATGTACTTTTGCTCAAGGTATTAAAAACTCAACAAATAACTTTGTTACTGTCAGATTCTGACATTTACTTCTTAACATAATTCGTTCTTCAGACATGGTAGTTTTGTTTCTACTTGAAATGCGCCGGCAGCTGAATATGTGAGACTATCTGCAGGTTGAAATATTGGTGGTACTGCAAAATGAACATTCTTTTAGCAGGCGGTCTGCACCAGATGTAGATCCTTTACTATATGAATACTCTCCGAGCACCAAGGAGCTTGCCGGCCATCTTAACAACTGTGCTCCTTTGTATTCCAATAGTTCTGTTGCAAGGCACAGTCTCGCTTCTACGGTAGAACACCCACCTAGAAGGGAATTACTCTCTGAGCCATTGTTACAGAATCCAAATTTGGGCGCTTCACTCCACAGGCAGTTCCATCAATCAGAAGCGTGCAGTTTAGCCCAAAAACTGCAGAAACCGATCGACGATGACAAGTACGATGACACTGATGATTGTTCTTCATGTCAAGCAAGCACTGTAAGTGCTGCACCTTCAATTCAGTTCAATAGAAAAGTATATTATCTCTTCCCCTGCATAACAGATTTTGTAACTTACAGCCAAAAGAGTATCGAAGCAAGAGAACTGGAACTGATGCGCAGATTGACATGGCCAGAATTTTATCCAGCAAGGAAGAAAATCTGGAGACCACGGGATCAAGTGCAAGAAGGATAGCAAGATGCTCTTCAGACATTAGTCATCTATACAATACAAAAATAGCAGACTTGATCAAAAGAAGCTCTGCACTTGAAGACCAGCTTGCGACTGCCTTGGTGAGCAAAGAACAGGCGGAGAAGAATTTATCGTCGGTCATCAACAGCAGGGAGCAGCTGGAAAGGAGGCTTGCCAATAAGGAAAAAGAAGCTGAGATGCTGAAGGAGAAGATAGCAGGCTTAGAGTTGGCACAAGAGGAGTCAAACAACCTCTCGAACACCGTTCATGCCGATAATGTGCGTCTGGAACGTGAAGTGGCATTCTTGAAGGCCATTACAGATGAGACTCAAAAGGCAAGAAATGCTCATTTTGATTGTTTAATATGAAATAATTTAGCTGCATGCTTTGCATAGCTGTACTGACTGAACTTCATCCATGTAGGAACTCCATTCGACCCGCCGAGTTTTAGCGGGAGAACAGTCGAGGGCATTCCAGCTCCAGGTATTTAAATTTTGAGTGATGCATTACTGTCCCTTTATTCAATATTGCTTGCTTTTCTTTCTAAGTTGTGATGCATTAAAGTTGTGAAGTTATCGGTAAATTTAATTGAAAAATGTCAAGCTACAGACTTATGACTATCTATTTCTCAAGGCATGTCAAACAATTTGGATAATGAACAATAATTACTGGCACTTAAGTTTTCTTCATCAGCACAAATTATTGTTCATGCATGCAACACAAGAAAACTCACCTGACATTCTGATCGTGCTTTGATCAGGTTGAAGTGTTCCATCTCAAACAACGGTTGCAGATGGAAGGAAGAGCGGGAACGCCAAAGAACCCTCCTGTTTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA037524