BGIOSGA037680

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Revision as of 08:42, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA037680| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA037680, complete gene.| tag = OS12G05...")
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Gene Name

BGIOSGA037680

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA037680, complete gene.

LocusTag

OS12G0582800

Ensembl Transcript ID

BGIOSGA037680-TA

Ensembl Protein ID

BGIOSGA037680-PA

Length

5676

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:19712522..19718197

Sequence Coding Region

19712522..19712757,19712865..19713020,19713729..19713792,19714080..19714289,19715020..19715208
,19715386..19715684,19715917..19716193,19716386..19716658,19717657..19717890
,19718048..19718197

Genome Context

<gbrowseImage1> name=IndicaChromosome12:19712522..19718197 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:19712522..19718197 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGATTCTGTCGGCGCTCGCGACGTCGGTGGGGATCAACCTGGGGCTGACGGTGCTCCTCGCGGCGGCGTACACGCTGCTCCGGCGGCGCCCGCCGTACGTCGCCGTGTACTCGCCGCGGCGGCCGTACGCGCCGCCGGAGCCGTGGCTGCCCGCGGCGTGGCGCCGCACCGAGGCCGACGTCCACGCCGCCGCCGGGCTCGACGGCGTCGTCTTCCTCCGCATCTTCGTCTTCAGCATTAGGGTGTTCGCGGCGGCGGCGGTGGTGGGGGTGGGAGTGCTGATGCCGGTGAACTTCATGGGGGACCAGCTGCGGCAGATTGACTTCTCCGATCTGCCCAACAAGTCCGTCGATCTCTTCAGCGTCTCCAACGTGCAGGATGGCTCCAACAAATTGTGGCTCCACTTTTCGGCTGTGTACATCATAACTGGAATTACATGCTACCTCCTTTATTATGAATACAAATATATTTCTGGCAAGAGGCTCGAATATTTTATGACATCAAAACCACTACCTCAGCATTTCACAGTTCTAGTTCGAGCTATACCTGTAACCAATGGTGTGTCTGTGAGTGATGCTGTTGATAAGTTCTTCAAAGAGTACCATTCATCTACCTACTTGTCACACACTGTTGTTCATCAAACTGGCAAACTCCGCCGCCTTCTTAATGACGCTGAGAATATTTGCACAAAGCTTGCCAACTTGAAGTCTGTACGGCGTACTTCTGGAGATCCTCCAGGAAAATTTCTTGGAATATTTGGCAGAAATGATCTTGTTGGGAAATATCAGAAAAGGCTGGAGGACCTAGAAGAAAATGTTAGAATGGAACAATCAGACACTACTAGGAGCAGACAGGAAGTTCCCGCTGCTTTTGTGTCATTCAGATCTCGATATGGTGCTGCAAATGCTATTTACATAAGACAATCAGACAAGCCTACTGAGTGGCAGACTGAGCATGCTCCTGATCCCCATGACGTTTATTGGCCTTTCTTTTCAACATCATTCATGGACAGATGGATATCCAAGTTTGTAGTCTCTGTAGCTTCTATTCTCCTGATACTCGTCTTTCTCCTAGTTTCGGCATTTGTTCAAGGACTCACCTATATGGAACAGCTAGAGACATGGTTGCCTTTCCTGAAAAATATACTGGAAATAGCTGTTGTCAGTCAGTTGGTTACAGGATATCTTCCCAGTGTCATTCTTCACTTTCTTTCCTCTTATGTGCCCTCTATAATGAAGCTGTTTTCAACGATGCAAGGATTCATCTCTGTTAGTGGGATTGAGAGAAGTGCTTGCAACAAAATGCTTCGGTTTACAATATGGAGTGTGTTCTTTGCAAATGTTCTTACTGGCTCAGTACTTGGTCAACTCGAGATATTCCTTGATCCGAAGGAAATCCCTAAAAGGCTTGCAGTTGTTGTACCAGCGCAGGCCTCTTTCTTTATTACATATGTTGTGACATCTTGGACAAGTATAGCATCAGAACTTACTCAAACTGCTGCCCTTTTATTCCATTTGTGGGGTAGCTGTGCAAAATGCTGCAAGAGGGATGAGTCCAAACCTCCATCAATGCATTACCATAGTGAAATTCCTCGGGTTCTCCTGTTTGGACTTCTTGGGCTCACATACTTCATTGTATCCCCACTTATCCTCCCATTTGTACTGGTTTACTTCTGCCTTGGCTACTTCATATATCGTAATCAGCTTTTTAATGTATATTCACCCAAGTATGACACTGGTGGAAGATTCTGGCCCATTGTGCACGGGGGAACAATATTTTCTCTGGTGCTGATGCATGTTATTGCAATTGGAGTATTTGGATTGAAGAAACTTCCCCTTGCATCAAGTTTGCTGGTACCTCTTCCAGTGCTGACCCTTCTGTTCAATGAATACTGCCGGAACAGATTTTTACCGATCTTCGAAGCATATTCTACTGAGTCATTGATAAAGAAAGACAGAGAAGAAGAGAGCAAACCAGAAATGGCAGAATTCTTCAGCAATCTTGTAAATGCGTACTGTGACCCGGCGATGAAACCTATCCAACACTCCTCGAATTCAGATGAACGCACTACCCCTCTATTGTCTTAG</cdnaseq>

Protein Sequence

<aaseq>MILSALATSVGINLGLTVLLAAAYTLLRRRPPYVAVYSPRRPYAPPEPWLPAAWRRTEADVHAAAGLDGVVFLRIFVFSIRVFAAAAVVGVGVLMPVNFMGDQLRQIDFSDLPNKSVDLFSVSNVQDGSNKLWLHFSAVYIITGITCYLLYYEYKYISGKRLEYFMTSKPLPQHFTVLVRAIPVTNGVSVSDAVDKFFKEYHSSTYLSHTVVHQTGKLRRLLNDAENICTKLANLKSVRRTSGDPPGKFLGIFGRNDLVGKYQKRLEDLEENVRMEQSDTTRSRQEVPAAFVSFRSRYGAANAIYIRQSDKPTEWQTEHAPDPHDVYWPFFSTSFMDRWISKFVVSVASILLILVFLLVSAFVQGLTYMEQLETWLPFLKNILEIAVVSQLVTGYLPSVILHFLSSYVPSIMKLFSTMQGFISVSGIERSACNKMLRFTIWSVFFANVLTGSVLGQLEIFLDPKEIPKRLAVVVPAQASFFITYVVTSWTSIASELTQTAALLFHLWGSCAKCCKRDESKPPSMHYHSEIPRVLLFGLLGLTYFIVSPLILPFVLVYFCLGYFIYRNQLFNVYSPKYDTGGRFWPIVHGGTIFSLVLMHVIAIGVFGLKKLPLASSLLVPLPVLTLLFNEYCRNRFLPIFEAYSTESLIKKDREEESKPEMAEFFSNLVNAYCDPAMKPIQHSSNSDERTTPLLS</aaseq>

Gene Sequence

<dnaseqindica>1..236#344..499#1208..1271#1559..1768#2499..2687#2865..3163#3396..3672#3865..4137#5136..5369#5527..5676#ATGATTCTGTCGGCGCTCGCGACGTCGGTGGGGATCAACCTGGGGCTGACGGTGCTCCTCGCGGCGGCGTACACGCTGCTCCGGCGGCGCCCGCCGTACGTCGCCGTGTACTCGCCGCGGCGGCCGTACGCGCCGCCGGAGCCGTGGCTGCCCGCGGCGTGGCGCCGCACCGAGGCCGACGTCCACGCCGCCGCCGGGCTCGACGGCGTCGTCTTCCTCCGCATCTTCGTCTTCAGGTCCCGCTTCCCCGCTCTCCTCTCCTCCAATCTCGGCATACACGCTGCTCGCTTTACTATGGGGGATGGAGATTGACGAGGTGATGGGGGATTTTGGTGTTGTGCAGCATTAGGGTGTTCGCGGCGGCGGCGGTGGTGGGGGTGGGAGTGCTGATGCCGGTGAACTTCATGGGGGACCAGCTGCGGCAGATTGACTTCTCCGATCTGCCCAACAAGTCCGTCGATCTCTTCAGCGTCTCCAACGTGCAGGATGGCTCCAACAAGTGAGCTATTTCGAGCTTCCTGATGCCTAATTTTTGTTCGCGGATTTAGGGGGTTTTAGTGGGTTTTGTGTGATTGTTAGTGCTTCAAGGTGGATACAATTGTTTAATAATAATAAATTACGTGCCAGTTATAGATTAAATTCTCGTTTTCGTATTAGGAGGATGAATCTCTTGGATTGTTTTAATGAGGTTGAGTATTTTGTTTATGCTAGTGGCTATTGAGATGTTCAGAGTATGCTTCACTGCACAGTTTTAGCTTAGGATTGCTCAGTTTGGTGAGCACTTTGATGGTTTTCTTTTCCTGGCCACTAGTCTATTTATAAAGCATGATTTGTTTTTATCATTGGTTCCTTATTTTTCTGAAATTCTAATTTGTATTTTCTTTGTTTTGAAGGGGCAAAGTGCTAACTGCATGAAAAAAAACACAGAGATTCACTAATTCACCTATTTGATGCTGTCTCGAGAAAATGCGTTGAATCTCTCTCATAAAAGAAAAATATTTCTTTTAGTAGTATCTAGAATTTGATGTCGGTCATTTAAAATCCAACGGTTTCAAACATGGGCCTGCATGCTTAGGCCTTCTCCATGGCTCCAGGCTGATGCGACCATTTTGCTAGAGTGTTAAGTTGATTTCTGTCTGGAATTTATCTTCATTATTGGGCTAGCAATGCATAACATACTCATTACCGGTGGTAATGTGGTGAACAGATTGTGGCTCCACTTTTCGGCTGTGTACATCATAACTGGAATTACATGCTACCTCCTTTATTATGTAAGTAATTGAGTATTTTGCTTCTTTTTGGCTACCTACTCACTGTTTTCAAACTAATTCAACATTTTACTTCCCTCTCTTATATTTGTGCTAGACCTAATAATTTGATCTATTTTCTTGATTGGATACTTCTTCAGTCAAACTCATTTGATATTTCAGTTACCATACCATGCATGCTTGTCAGATCTGGCATTCATTTATCAAATTCTTCTCGTTGAAGTTCTGCTTTGCTGCTTTCCTGTTTTCACATCTTTATGTACACAGTGGTTTATGTTAGCTCTTTGCAGGAATACAAATATATTTCTGGCAAGAGGCTCGAATATTTTATGACATCAAAACCACTACCTCAGCATTTCACAGTTCTAGTTCGAGCTATACCTGTAACCAATGGTGTGTCTGTGAGTGATGCTGTTGATAAGTTCTTCAAAGAGTACCATTCATCTACCTACTTGTCACACACTGTTGTTCATCAAACTGGCAAACTCCGCCGCCTTCTTGTAAGATTCGATTGTTTTGCTACTTTCTATTGCTTCAGTATGGTTAACATCCTATATTTTATCCATGGTTCCAACAACACTTACTATATGGGGTGTCTATAGATTGACTTACTGCATTGGGTACATGTTGTTGTATTGAAAGTAGATAGTGATAGGTTTGCAAGGCTTGCATTTTGTTTCAGTTATAATCAATATGTTTTGACAACTTATTAGTCCTTTACTTAATTTCTTGTGACTAAAACAACTCACCATACTGGAAGTTGCTATTTTACTTTCAACATGTCACTTCTAACTCTATGTTATTAGTCTGATATATACATCTAGTGATTATGTCGAAAAGTAGATTTTAGATTAAACGTGGAGTCACAGAATTGCTCCTTTCCATTGTTTCATAAATAAAATACAGAAAGTATCTAATATGTTTCTGCCTAGACATGTCAAAAAATTCAAGGGGAGAATATATACATCAGTTGTGATCCTCATTTGAAAGTTGTCCGTATCTTATTTCACCTTTCAACACGCAGATTTATTCCCTTTTTTTTTGTCATGCGAACAATTTTGTTTATCCTAAATGTATCTTAAGAAATGGTACACCAGTAGATTTTCTTCATCAGCTGGAAAACTAAACAGTTCCATCTCTACATTTAGATCAACTTTATAATGTCTTTGTTCTATATTGCTTAATGTAATCTCCAGTTCCATTTTGATAGTTGACTCCATCTCTGTCCAGAATGACGCTGAGAATATTTGCACAAAGCTTGCCAACTTGAAGTCTGTACGGCGTACTTCTGGAGATCCTCCAGGAAAATTTCTTGGAATATTTGGCAGAAATGATCTTGTTGGGAAATATCAGAAAAGGCTGGAGGACCTAGAAGAAAATGTTAGAATGGAACAATCAGACACTACTAGGAGCAGACAGGTGCATATTTCTACCAATTTTGGTCTTGCTCAAACCATGATGTTTCAATATCTCCCTATCTGTTTGTTATACTGCATTGGAATTAGTATTTGGCTCTGGTGCTCATCTTTCAGAAAATTTATTTATAAACATTTCAATATTTTGTCATCTGTTCTGATTTTCTTTACATCTCTTTAGGAAGTTCCCGCTGCTTTTGTGTCATTCAGATCTCGATATGGTGCTGCAAATGCTATTTACATAAGACAATCAGACAAGCCTACTGAGTGGCAGACTGAGCATGCTCCTGATCCCCATGACGTTTATTGGCCTTTCTTTTCAACATCATTCATGGACAGATGGATATCCAAGTTTGTAGTCTCTGTAGCTTCTATTCTCCTGATACTCGTCTTTCTCCTAGTTTCGGCATTTGTTCAAGGACTCACCTATATGGAACAGCTAGAGACATGGTTGCCTTTCCTGAAAAATATACTGGAAATGTTAGTGTTTATCCATCTATTTATTTTTCACTACTTTCTGTATTTTGTTATTTCAGAAAAGAATCACCATTTCTTATAAAGTTCCAGTTTGCAGCAGTCATGCATTTTTTTGGATGCTTAATTTGGGATACTAATATTTACAAATTTTACCATGTTGGTTTTAATTTTTCTAATGCATTGCACAATATGATGGGATTCACTAACCAAGCTAAAATTTATTTGATTGTTGCAGAGCTGTTGTCAGTCAGTTGGTTACAGGATATCTTCCCAGTGTCATTCTTCACTTTCTTTCCTCTTATGTGCCCTCTATAATGAAGCTGTTTTCAACGATGCAAGGATTCATCTCTGTTAGTGGGATTGAGAGAAGTGCTTGCAACAAAATGCTTCGGTTTACAATATGGAGTGTGTTCTTTGCAAATGTTCTTACTGGCTCAGTACTTGGTCAACTCGAGATATTCCTTGATCCGAAGGAAATCCCTAAAAGGCTTGCAGTTGTTGTACCAGCGCAGGTACAGCTTGCATTTATTGTTGCCTTAAAAACTGCTTAGTGAGTGAAAAAGCTCTTTGTTTTGTAGATATTACTGTGGGCATTTCAATGTAAAATCTGCTTCTTAAACAACTGTCTCTTGTGTAGTATTGTATTGATCTCTTCCTCAACTGTGCATTGCTAAACTGTCCTTTGTTTATGCTTTGCTCTACAGGCCTCTTTCTTTATTACATATGTTGTGACATCTTGGACAAGTATAGCATCAGAACTTACTCAAACTGCTGCCCTTTTATTCCATTTGTGGGGTAGCTGTGCAAAATGCTGCAAGAGGGATGAGTCCAAACCTCCATCAATGCATTACCATAGTGAAATTCCTCGGGTTCTCCTGTTTGGACTTCTTGGGCTCACATACTTCATTGTATCCCCACTTATCCTCCCATTTGTACTGGTTTACTTCTGCCTTGGCTACTTCATATATCGTAATCAGGTGAGAGTGTTGCAGTTCATTTATCAGTACTTTATAATTTTCTGTTCTTCTACTCATGGAGTCTTTATGCTGTAATATACCTGGTTGGAATTTGGAAGGACATATTAGTACCTAAACCTGTTCGAAATTTGGATAGGGACTGACCAATTTGTTTGACACTTGCATAGTAATTTACTGAACTTGGTTTTGCAGACTGCCAGACTTGGTACTTAAAATTCACTTACACCACAAGGTGTAGATGGAATCAGGATAACGTGGGTCCAACTATAAATAACTTTTTCTTAGAATGTTTAGCACATAATCGTAGTGTTGTTTCCTGAAAGATGATCTAGATAATCTAGTGATGTAATTTGTAACACTCAGTCTGAAAGGCATCCAACAGTTCAAGTGTTATAATGAGGACTTTCTTGTGTGCAATGATTGCCTGGTAGAACAGTAGAAATTGCTTTCCCGCAAGTATTTGTCTTCTTTCACATCTTGCAAATAAGATTATGTTTGGTTTTTTAATCTCAGTGAGATATAAGAGAACAAAGAACGCCCTTTATATGTTCTTAAGAATTTCGAGAACTTCCACAGTTGATTTCATGCGTTTGCAACGGTCACATCATCTATAATAGGTGTTGTAAATACTTCAGGCGTCCTATTTATCCATGCATTTGGAAGCTGGTATCAGTATACCATGTATTCTGGTTACACTGGTCCTGCAAAGATTAAACGATGTATTATTTGTTATATGAAAAATTGCCAAATCAACACCATGCATTCTAAAAGTGGATTGTTTAGCTGGATAAATGTGCCATACCAGAGAACCATGACACAGTTAAAGTGATATTTTTCCATCCATATAGTAGTTAATAAGGCACCAATAATTCTACATTGCATCATAGTAATACTTTAGGCCCCTTTAGTCCGACCAATCTGGAATTTGCACGTGTTTAACTCTGTAAAGCATTAGTTTATCCGTGTACACTTCTTAACTTTGCATAGTACAAATGCAGCTTTTTAATGTATATTCACCCAAGTATGACACTGGTGGAAGATTCTGGCCCATTGTGCACGGGGGAACAATATTTTCTCTGGTGCTGATGCATGTTATTGCAATTGGAGTATTTGGATTGAAGAAACTTCCCCTTGCATCAAGTTTGCTGGTACCTCTTCCAGTGCTGACCCTTCTGTTCAATGAATACTGCCGGAACAGATTTTTACCGATCTTCGAAGCATATTCTACTGAGGTAATGTGTTTTTCATTTTGTCCAAGGGTGCAATGTAATTCTCTTTGTGCAACTATGTATCAAAACGAACAACGCATCATTCTGGTCCTTTTAGCTTATCACTTCGATAGTTCGATTAGATATAATGTGTATTCACGTTCTACCTTTCGTGCTGCAGTCATTGATAAAGAAAGACAGAGAAGAAGAGAGCAAACCAGAAATGGCAGAATTCTTCAGCAATCTTGTAAATGCGTACTGTGACCCGGCGATGAAACCTATCCAACACTCCTCGAATTCAGATGAACGCACTACCCCTCTATTGTCTTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA037680