BGIOSGA037773

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Revision as of 08:44, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA037773| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA037773, complete gene.| tag = OS12G06...")
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Gene Name

BGIOSGA037773

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA037773, complete gene.

LocusTag

OS12G0609800

Ensembl Transcript ID

BGIOSGA037773-TA

Ensembl Protein ID

BGIOSGA037773-PA

Length

5298

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:21347586..21352883

Sequence Coding Region

21347586..21347705,21347787..21347975,21348085..21348249,21348481..21348877,21348958..21349076
,21349753..21349830,21349966..21350106,21350244..21350288,21350426..21350592
,21350662..21350740,21350814..21350896,21351048..21351177,21351261..21351393
,21351784..21351932,21352170..21352365,21352681..21352883

Genome Context

<gbrowseImage1> name=IndicaChromosome12:21347586..21352883 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:21347586..21352883 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGATCACCGGCGGCCAGAGCTACGTCTCCGCGCCGCCGGCCTTCTCGGCCGACGGGCGTCTCCTCCTCGACTGCACCGGCCGCACCGTCTCCGTCTTCAGCGCCTCCACCGGCATGCTGGTGTCGGAGCTGGAGGGGCACGAGGGGGACGTCACGGCGGTGGTGGTGGCGCCGCCGCCGGTGGCGGCGGCGGCGAAGCTCGCGAGCTACTGCTGGACGGCGGGGCTTGACGGGTTTCTGATTTACTGGGACTTCGCGGCGGCGGAGCTGGTGCGGAAGGTCCAGGTCGGCCTCCCCGTGCACTCCATGGTCATTCCTAACATAGCCAGAATATCGAGAGGAGCTGAAATTTACACGCCGTTTGCATTCGTCTCTGTTGAAGATACCAGTAAGCCATCTAATGAGAAATTGCGCGGGCAGTTGCGAATTTATGACTTAACCAAAGGGCGTCAAGTGGGTAGTCTTCTGGCTGAGACCCGTAAACCGGAAATGATTGTTGCAAGTAGCTCTGGTGAATTTTTGGGTATTACAAATAAGAGAAAGCTCCATGTATGGAGGATACCAACAAAAAATTTCAAGCCCGACAAGATAAGGAAGATAAAGCTTAGCCACACAAAAAACTTGAACACACTGGCCTTCCATCCAAGTGAGAGAATTGTTGCTAGTGGTGATGCAACGGGGCGAATACTGATCTGGAGAGGTTTTGGAAATGCAAAGTTTTCTGGATCAGATGGCACAAAATCTGAACTAGATGAAGACAGGGGTGATGTGAGGGGTAATGGTGATGCAGATACTTGCACTACATGGCATTGGCATTCAAGCGGAGTGAGGTTTCTCAAATTTTCTACTGATGGAGCTTACTTGTTCTCAGGTGGTATGGAGGGAGTTATTGTTGTATGGCAACTAGATACTGGGAAGAGAAGATATAAACCACGTCTAGGGTCTCCTCTTTTGTCCTTTGTAGATTCTCCGGATTCTTCCATTGCCTGTGTGTCATGTATGAATAACCAAGTCCATCTTCTAAAAATGCCCAACATGGAGGTCATGAAATCTATTGCTGGAATTAAGCTACCTATATCTTCACCAAACCTGGGTGGTTGTTATCGAGATGTGTATGGATTTGATTACAGTAACAAACTTGTTGCTGTGCCAACAGAAGATTATTGCATACAGTTCTACGATTTGTTTGAGAATACTGAAGTTTCAGAGGTGCAAGTTTGTGAGAGGAACTTTCAGCCTGTTGATGATATCACAATGTACATTTCCTTAGTTTCATTGTCAATTGATGGTAAGTTTATGTGCACCGTTGATGTCAAGCTTCCTGAAGAAGAATTAGGTGGGCTTGTTACATTGAAATTTTGGAACCAAGGATCTCGTGCTGGACAATATTTTTTGTCCACTGTCATTTATGAGCCGCACAGCGATGCTGGAATTTCTGCTATTGCTTTCCGCCCTGGAAAAAACATGGCTGTGAGCTCTTCATTTGGTGGCAACTTTAAGGTTTGGGTCCAAAGTATGCTTTCACAACCAAGTGATGAAAAAAATCAATCTGGTTGGAGATGCCAATCCGTTGGCTCATACAAGAATAAACCTATGACAGCCGCAACTTTCTCAAGCGATGGATCTGTTCTTGCGGTTGCAGCTGAGAATGTCGTCACATTGTGGGATCCTGATAATAACACACTTGTTGGTGTGATTGCAGAGGCACTATCGCCCATCACAAAACTTTCGTTCATTGGGACATCACCATTTTTGATGTCTCTATCTCAGAGCTCCAAACCACAGGTTGCCATGTGGAATGTTCCAAATCTTTCCATGCAATGGTCTTACAGCCTCTTTGCAGAAGCTGCGTGTTGCTCGTCAAGTAGAAGTGAGTTTGCAGTTCTTGCTCTTCTAAGCTGTCCTGATGGAGAAACACTGGCAGAGCAAGATGGGGTGATACTACTTTTCGATGCAGAAAATCCAAAGCCTGTTTCTTCCTGGTCAGTAAAGAAGGCAAGGGGAGGCAGCGTTGCTTTTTTGAAGGGTGATTCCTCTTTGGATACAAACAGAAAAGACATGATAGATGGAGAGGCATCATCGCTGGTTTATGTAAACGGTTCTCATGAGTATGTTATATTTGATCCCCGAAGCAATGAAGAATTGCATATTGGCAAGAGTGCACACAAAAGTATTCAAACTGAGGAGCCTGGACCAATTGGTTATGCTTCTATTTTTGGAGAACTTCCGAAACTGGAGTCAAAGAAAGATGTTCCAGAAATTCTATTTATACCTTCAGAGAGACCTTGGGAGACTATATTCAGTGGATCAACTCATGTTCTTCCGCCTCTCACAAAGTTATGTCCTGCCTTCTTGGCATCATTGCTTGAGAAGAGACCAGTTGCAAATGAGTGA</cdnaseq>

Protein Sequence

<aaseq>MITGGQSYVSAPPAFSADGRLLLDCTGRTVSVFSASTGMLVSELEGHEGDVTAVVVAPPPVAAAAKLASYCWTAGLDGFLIYWDFAAAELVRKVQVGLPVHSMVIPNIARISRGAEIYTPFAFVSVEDTSKPSNEKLRGQLRIYDLTKGRQVGSLLAETRKPEMIVASSSGEFLGITNKRKLHVWRIPTKNFKPDKIRKIKLSHTKNLNTLAFHPSERIVASGDATGRILIWRGFGNAKFSGSDGTKSELDEDRGDVRGNGDADTCTTWHWHSSGVRFLKFSTDGAYLFSGGMEGVIVVWQLDTGKRRYKPRLGSPLLSFVDSPDSSIACVSCMNNQVHLLKMPNMEVMKSIAGIKLPISSPNLGGCYRDVYGFDYSNKLVAVPTEDYCIQFYDLFENTEVSEVQVCERNFQPVDDITMYISLVSLSIDGKFMCTVDVKLPEEELGGLVTLKFWNQGSRAGQYFLSTVIYEPHSDAGISAIAFRPGKNMAVSSSFGGNFKVWVQSMLSQPSDEKNQSGWRCQSVGSYKNKPMTAATFSSDGSVLAVAAENVVTLWDPDNNTLVGVIAEALSPITKLSFIGTSPFLMSLSQSSKPQVAMWNVPNLSMQWSYSLFAEAACCSSSRSEFAVLALLSCPDGETLAEQDGVILLFDAENPKPVSSWSVKKARGGSVAFLKGDSSLDTNRKDMIDGEASSLVYVNGSHEYVIFDPRSNEELHIGKSAHKSIQTEEPGPIGYASIFGELPKLESKKDVPEILFIPSERPWETIFSGSTHVLPPLTKLCPAFLASLLEKRPVANE</aaseq>

Gene Sequence

<dnaseqindica>1..120#202..390#500..664#896..1292#1373..1491#2168..2245#2381..2521#2659..2703#2841..3007#3077..3155#3229..3311#3463..3592#3676..3808#4199..4347#4585..4780#5096..5298#ATGATCACCGGCGGCCAGAGCTACGTCTCCGCGCCGCCGGCCTTCTCGGCCGACGGGCGTCTCCTCCTCGACTGCACCGGCCGCACCGTCTCCGTCTTCAGCGCCTCCACCGGCATGCTGGTACGCGCCGTGGAGAGAGAGATTTTGTGGCTCGCTGTGTGTGTGTGTTTTTTTTGTACTGATGGGGGAGTGTGTTTGCAGGTGTCGGAGCTGGAGGGGCACGAGGGGGACGTCACGGCGGTGGTGGTGGCGCCGCCGCCGGTGGCGGCGGCGGCGAAGCTCGCGAGCTACTGCTGGACGGCGGGGCTTGACGGGTTTCTGATTTACTGGGACTTCGCGGCGGCGGAGCTGGTGCGGAAGGTCCAGGTCGGCCTCCCCGTGCACTCCATGGTGAGCCGCTTTGCGAATTTCGCCGCCTTGGTTGCTACCGTTTTGTTGTGAGCAGTGAATTGGGCAAATGTTTATAGGTTAATTTTTTTTTATTCTGTTTTGGGCGCAGGTCATTCCTAACATAGCCAGAATATCGAGAGGAGCTGAAATTTACACGCCGTTTGCATTCGTCTCTGTTGAAGATACCAGTAAGCCATCTAATGAGAAATTGCGCGGGCAGTTGCGAATTTATGACTTAACCAAAGGGCGTCAAGTGGGTAGTCTTCTGGCTGAGGTACAATTTTTACCTGTCCCAGTTCGTTTTCTGCCCATTTTCCTTCGACAATATGTTTTTAGATATTTTATTGATCATGCTATGAATAGTGAGCGTCCATTTGGAAATGTAGTTTGCTGCTAATATTGCTATTGCAATTAGAAATATAACAATAATATTGTGCCGTAGTAGCTGTGGTAAGGTTTTCTTTTAAAACTTACATCAATGCGTTGTTTGCTTCGATTTAAACAGACCCGTAAACCGGAAATGATTGTTGCAAGTAGCTCTGGTGAATTTTTGGGTATTACAAATAAGAGAAAGCTCCATGTATGGAGGATACCAACAAAAAATTTCAAGCCCGACAAGATAAGGAAGATAAAGCTTAGCCACACAAAAAACTTGAACACACTGGCCTTCCATCCAAGTGAGAGAATTGTTGCTAGTGGTGATGCAACGGGGCGAATACTGATCTGGAGAGGTTTTGGAAATGCAAAGTTTTCTGGATCAGATGGCACAAAATCTGAACTAGATGAAGACAGGGGTGATGTGAGGGGTAATGGTGATGCAGATACTTGCACTACATGGCATTGGCATTCAAGCGGAGTGAGGTTTCTCAAATTTTCTACTGATGGAGCTTACTTGTTCTCAGGTTTTGCTTGCTGATTTGTGTTCATTCAGTTGTGATTCTAGGGTTTTATGCTTTTCAATGACAAGTTCCTTATCTTATAGGTGGTATGGAGGGAGTTATTGTTGTATGGCAACTAGATACTGGGAAGAGAAGATATAAACCACGTCTAGGGTCTCCTCTTTTGTCCTTTGTAGATTCTCCGGATTCTTCCATTGCCTGTGTAAGTATCCCCATATTTTACATCTCCCATTGAACTTCGTTGGACCTGATATAGTAATCTGAAGAGTGAAAAACACTATTTTGTTGATTTAAGAGTTATTTGAATATGATGTTGCCACATAGTAGCCTCCAGTCACAAAAACAAGTCGTTTTGGACTTATCTAAGTCCACATTATACAATTTTTTACTGCCTAGTTCTTTAGCATAAATTTTAAAAAAGTTTATATAACTGTAATATTATGAAAGCTCTTGTTATGACAAAATTGAATTTATCAGTTTCATTTGCATACCGGAATACTATATTTTAACTGATATTTATGGTCAAAGAACTCATGTTGACTGCATGCATTTTAAATTGACTTGTTTTTTTGTGGCCAGAGTGAGCATAATTATATATCATAATCATACATGTCCACATTAGGTTACATGATGTTATTAGAACCGTATGAGAAAACTAGAATGGTTCAGCACTTCAGCATCTTTTTATGGTAACACATTTACTTCCTAATGGGCTGTACTGATGATGGGGGCTCATAAAGTGTAGCAGGTAGCATTTTTGTATTAGACTTTTTTTTGGCTCTATGATTGTTTCAAACTACCGTTTCTTTTTGTCTGTTTCTGTTTCATTTGTTTGCAATTCATTTTTGAAGTAGAGCTTAATGTTCTTTGTATTTCAGGTGTCATGTATGAATAACCAAGTCCATCTTCTAAAAATGCCCAACATGGAGGTCATGAAATCTATTGCTGGAATTAAGGTTTGTAATAGCATAAATATGCCCTTTAAGAGCCCACTCTAATCCAAATAAATTGTATTGATGATCTCTGCTGTTTCACTTTTTGGTGATTATATTATGTGCTAATGGATGTCTTTTATTTGTTTATCTCTTCAGCTACCTATATCTTCACCAAACCTGGGTGGTTGTTATCGAGATGTGTATGGATTTGATTACAGTAACAAACTTGTTGCTGTGCCAACAGAAGATTATTGCATACAGTTCTACGATTTGTTTGAGAATACTGAAGTTTCAGAGGTAAAACAGTAAGCATATGAGAGCATTTTATCATATTTTATCCAGTTCTGTGGTTCTCAGTATATTGAATCGGTACTTGTCTTCCTGTTCTGGTTTTGTGCAAGAATATCCCATCCCAATATTTTTACTTTCTACAGGTGCAAGTTTGTGAGAGGAACTTTCAGCCTGTTGATGATATCACAGTGAGATAACAACTTCCTTTTGCTTGTACCGTAGATTTCTTTTGTTAGGTTCTTGTGGCTTAAAATTTTTCTTTGTTTTTCACATTTATTTTAGTATCCAGAAGTTTGCTCTGATGAGAATGCTTTCATTTCCACAGATGTACATTTCCTTAGTTTCATTGTCAATTGATGGTAAGTTTATGTGCACCGTTGATGTCAAGCTTCCTGAAGAAGAATTAGGTGGGCTTGTTACATTGAAATTTTGGAACCAAGGATCTCGTGCTGGACAATATTTTTTGTCCACTGTCATTTATGAGCCGCACAGGTACCAACATGACTATATAAGGTCAATTATAAATGGTTGCATATGTTCTCTTACCATTCTTTCATACAGCGATGCTGGAATTTCTGCTATTGCTTTCCGCCCTGGAAAAAACATGGCTGTGAGCTCTTCATTTGGTGGCAACTTTAAGGTGTGCATATCTATTGGTTATTGAGATGATGCTCTGCGTATCTATTTCTTAATTTTTACTGTTTTACCTGTAGGTTTGGGTCCAAAGTATGCTTTCACAACCAAGTGATGAAAAAAATCAATCTGGTTGGAGATGCCAATCCGTTGGCTCATACAAGTGAGTTGACTTTGTTAATTTAATTTCCCTTTAAACAATACCTCAATATTGCTGCCATAAGCATATATGTTATTGTTTATGCTGCTATAATATCATCTATTAATTTGTGGCAAATGTTGTAAATGGTGACGTAAAAAATGAAAAATTGCAGGAATAAACCTATGACAGCCGCAACTTTCTCAAGCGATGGATCTGTTCTTGCGGTTGCAGCTGAGAATGTCGTCACATTGTGGGATCCTGATAATAACACACTTGTTGGTGTGATTGCAGAGGCACTATCGGTATTGTATTATTCCTCAGCGTGGACTTTTGCCATTCTGTTCAGATTAATAGTTTGATATGTGTATCTCATTTCAATTTGCAGCCCATCACAAAACTTTCGTTCATTGGGACATCACCATTTTTGATGTCTCTATCTCAGAGCTCCAAACCACAGGTTGCCATGTGGAATGTTCCAAATCTTTCCATGCAATGGTCTTACAGCCTCTTTGCAGAAGGTACAAAATTATCTCGTTGAAATGTTTCTTATGATTTTATTACATGAGTTGGTTCAGATTGCATGTCTAGTTATTCATCTTCATGATGACTATTAAGATTTAATCTTACCAGCTTGAAGAGCTGCCAAATGATAGTTCTAATAATTCAATTACCCTATACAGATGTAGTCGTCTAGATCCAATTGTTCTGTACGTTCATGATATAGAATTAAGTAGGCAAACTATAGCTAATAGTCTAGTACAGAACTTAGGTTTGACCTTTGTGCGAACATTTCGAAATTCTATCAAAGAAGTTGGGTTTGTGAAAACAAACTGCTGATATCTCCTTGGATAAGTCCGCAGAAAAATGCAGCTGATATAATTCTCATTTTATATATGTACTTTTGACAGCTGCGTGTTGCTCGTCAAGTAGAAGTGAGTTTGCAGTTCTTGCTCTTCTAAGCTGTCCTGATGGAGAAACACTGGCAGAGCAAGATGGGGTGATACTACTTTTCGATGCAGAAAATCCAAAGCCTGTTTCTTCCTGGTCAGTAAAGAAGGTATGTTTGGCTGAGTTGTTATACTCTGAACAGTCCATAGAGCACATTATATATTTTCTGGGACTAAATTTTCTGGTTAGTGATTGTAGGCAGTGCGCATTGTTAGCTACCTATTGCTTTGGTTCTCAAGTGAAATGTTTATATTTTGTTTCTTTCCTCTGCTTGTGTCAATCTGTGTTGAATGCATCAGTGGCCCATTAATGTGTTACAAGAATTAATTTCACATTTCTTTTGTAGGCAAGGGGAGGCAGCGTTGCTTTTTTGAAGGGTGATTCCTCTTTGGATACAAACAGAAAAGACATGATAGATGGAGAGGCATCATCGCTGGTTTATGTAAACGGTTCTCATGAGTATGTTATATTTGATCCCCGAAGCAATGAAGAATTGCATATTGGCAAGAGTGCACACAAAAGTATTCAAACTGAGGAGCCTGGTGAGTTATGGTTTTGCTGCATTTATTCTAATCGGCTTCTGTATACTTGTATTGTTCATTGTGTTAACCTGCTCTTCTCTACGGCCATATTTGCTGGTGGCAAGATTATATACTAATATGAACATCATGTCCCAACATTTTCTCATGCTAAATGTTTTAAACTCCAGAAACCATTCTCTTTTTAATGCTAGCCTTCCAGAAACCCTTTCTGAATATTGTTGCACTGTGCTTGACAAAACCATTTATTTGCCCCTTTTTCTTTTGTACTCTAAAACATGTTGAAAAAGGTTCTGAAAATCATTTTTGTTATTCCAGGACCAATTGGTTATGCTTCTATTTTTGGAGAACTTCCGAAACTGGAGTCAAAGAAAGATGTTCCAGAAATTCTATTTATACCTTCAGAGAGACCTTGGGAGACTATATTCAGTGGATCAACTCATGTTCTTCCGCCTCTCACAAAGTTATGTCCTGCCTTCTTGGCATCATTGCTTGAGAAGAGACCAGTTGCAAATGAGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA037773