BGIOSGA037819

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Revision as of 08:45, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA037819| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA037819, complete gene.| tag = OS12G06...")
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Gene Name

BGIOSGA037819

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA037819, complete gene.

LocusTag

OS12G0621500

Ensembl Transcript ID

BGIOSGA037819-TA

Ensembl Protein ID

BGIOSGA037819-PA

Length

5426

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:22137495..22142920

Sequence Coding Region

22137495..22137500,22137602..22138981,22139088..22139210,22139354..22139526,22139690..22139930
,22140289..22140381,22140450..22140590,22140716..22140808,22140991..22141195
,22141351..22141436,22141890..22141978,22142127..22142178,22142256..22142312
,22142404..22142571,22142677..22142757,22142840..22142920

Genome Context

<gbrowseImage1> name=IndicaChromosome12:22137495..22142920 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:22137495..22142920 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGCAGAAGGACAGCGGCGGCGGCGGCGGTGGGTTGGCGCGGCGGTTGATGCTGGATGCGAGCGGGAGGGAGATGGACTCGCCGCGGTTCAGGGCGATCCTGCGGGCGACGAGCGGGCGGCGGAAGCGGGCGCCCGACGTGAAGAGCTTCTCGCACGAGCTCAACATTCGCGGGCCGCTCCTCCACCCGCTGCAGCAGCGGAAGCCGCGCGGGTGCGTGAACAGCCCGGAGGAGTTCATCGGCGCCATCAGGACAAAGTTCATCAGGCTCAAGGAGGAGGTCGACGCCGAGCTCGGGGTGTTCGCCGGGGACCTCGTCGGCGCGCTCGACAAGGCCGACGGGGACGAGGAGCGCGTCGCGCTCGAGGACCTGCTCGTCGTCGCGCAGCGGTGCGCCGAGATGAGCCCCGAGGAGCTCTGGGTCAAGTGCGAGTGCATCGTCCAGGGCCTCGACGACCGCCGCCAGGAGCTCACCGCCGGCGTCCTCAAGCAGGCGCACACCCGCGTCCTCTTCATCCTCACGCGCTGCACCCGCCTCCTCCAGTTCCGCAAGGAAGGCGGCGGATACGTCGCCGCCGACGACAAGCAGCACGTCCTCAGCCTGCACCAGCTCAGCGACCTCGGCCTCTACCCCTTCAAGGTCGCCGGCGGCTCCAGCGAGCTCGGCCGCAAGAGCACCTCCAGCTTGACCGAGCTCAAGGAGAGGCTCATCAGGCGGAGGATGCTGGAGCACAAGCAACTCACCCTCGACTTCTCGGCGGGCCGTGTCATTTCGTCAGACACCGGCGGCGATTCCCCGGGCAGCGGCGGCAAGATCTCATCCTGGAAGAAGCTTCCATCCCCTGCCGAGAAGACCCTGCACAAGGTTACGGAACCGACAACGGAGGAGAAGACCACCCCTACAAAGAAGAAGGCCATTACGAGGAACAAGGTCGCCGTGGATGAGATCGTCGAGAGGATTGACGCGGCTAGCATTCACCCCGACGGATTGTCATATCTTGGGGACTCTGCTGTGAAGCTCGAGGTTCCATCTGGGTTCCCAGAGGCTCAGCAGATCATCGTCGACGGGAAGCCGAGGATGATATGCAGGATCTGTGACTTTGAGATCCCCATGGTATGCGCAGAAGGGCACTTCATAGTGTGCACATTAGCTGATCGGTGTGATTCCAAGGGCCTGAATACGGACCAGCGGCTGCAGAGGGTTGCCGAGGTGCTCGGGAGGGTTTTGGGTTGCTTTGAATCGAAGAGCCCGCAAACTGCAGAATGTAATCATAATGAGACTGCAAGAGGTAGCACGTCGAGTTTAACGGAATCCGATGGATCCATGGATCATGATATTCTGTCTCATCTGTTGACAGTGCCATCGACAGAGTTGTTTTCAGAGGGAGCACTCACACCAGCGTCAGGCAGCATGCCACAGTCACCATTGCTGACACCAAGAACTAGCCACGCAGAGTCACAGCTGACTAAACACAAGGCATTCGTGGAACTAGAGAACTTTCAGCAGGTTGAAAGCTTAATGACTATTGCTAGAGGCATCGAGAGAATAAAAAACTCTGAGTACAACTCGCTTGAGGACTTGAGCTCTTATCTAGAAGATCTAAATGCTGTCATTGACACAAGAAAAGTGGATGCCCTTGTTGTGGAGACATTTGGAAGAAGGATAGCTAAATTACTACAGGAGAAATTTATTCAACTATGCGGACAAATAGAGGACTCAAACACTGATTCATTAGGTTCAATAGACGAAGATGGTCCTATGGAGAGTAGTGTAAGCTCGAGAACAAGCCAGATGAATGGTAAATTCAAAGATCGTACCTCAATTGAGGACTTTGAAATTATAAAGCCAATCAGCCGTGGTGCATTTGGGCGTGTGTTTCTTGCAAAGAAAAGGGTAACAGGAGACCTTTTTGCCATCAAGGTGCTCAAAAAGGCTGATATGATCCGCAAGAATGCAGTGGAAAGCATCTTGGCAGAACGTGATATCTTAATATCAGCTCGCAACCCATTTGTGGTTCGATTTTTCTACTCCTTCACATGTAGGGAAAACCTTTATCTTGTTATGGAGTACTTGAATGGAGGAGATCTGTATTCCCTCTTGAGAAACCTAGGTTGTTTAGATGAAGATATGGCAAGGACGTATATGGCTGAACTTGTTCTTGCTTTGGAGTATCTGCATTCTATGAATGTGATTCATCGTGATTTGAAGCCCGATAACCTTTTGATCTCCCGTGATGGCCATATAAAGTTGACTGATTTTGGGCTATCAAAAGTTGGTCTTATCAATAGCACCGATGATTTGTCTGGTCCAGATGTCAGCAATGTTCTTGTTGGTGATCATCAACCTGCAGATGCAGAACAACGTGCACAAAAGCGAGAGCAAAGGCAAAAACAGGCAGCTGTGGGTACTCCAGACTATTTGGCCCCTGAGATACTGCTAGGGATGACCCATGGTCCAACTGCAGATTGGTGGTCAGTTGGCGTCATTCTCTTTGAGCTTCTTGTGGGAATTCCTCCATTCAACGCTGAGCATCCGCAGATAATATTTGATAATATAATGAATCGGGAAATACCTTGGCCACAAGTACCAGAGGAACTGAGTTTCGAAGCATATGACTTGATTGACAAGTTGCTAATTGAAAACCCTGTACAAAGATTAGGAGCAACTGGTGCTGGAGAGGTAAAGGCTCATCCTTTCTTCAAAGATATAAATTGGGATATGATTGCCAGACAACAGGCTGCATTTATTCCTTCTACAGATGATGAATATGATACAAGTTATTTTGCCTGTCGTCACACATGGGACGACCAAGTGAATGTAGCCTCTAACGACTACGACGATAGAAGTGAAACTAGTAGCATGAGTTGTGGCAGTAGTCCACACAGTTGTGATTATGAGGAAGATGCGGATGAATTTGGTAGCATGGAAGAATTCGGAGCTCCATCACTGTCAGTGAAATATTCTTTCAGCAATTTCTCATTCAAGAACATTTCTCAGTTAGCATCCATGAACTATGATCTGATCACAAAGCATAACGAGGATCCCCTACAGTCTTCAAAATCTTGA</cdnaseq>

Protein Sequence

<aaseq>MEQKDSGGGGGGLARRLMLDASGREMDSPRFRAILRATSGRRKRAPDVKSFSHELNIRGPLLHPLQQRKPRGCVNSPEEFIGAIRTKFIRLKEEVDAELGVFAGDLVGALDKADGDEERVALEDLLVVAQRCAEMSPEELWVKCECIVQGLDDRRQELTAGVLKQAHTRVLFILTRCTRLLQFRKEGGGYVAADDKQHVLSLHQLSDLGLYPFKVAGGSSELGRKSTSSLTELKERLIRRRMLEHKQLTLDFSAGRVISSDTGGDSPGSGGKISSWKKLPSPAEKTLHKVTEPTTEEKTTPTKKKAITRNKVAVDEIVERIDAASIHPDGLSYLGDSAVKLEVPSGFPEAQQIIVDGKPRMICRICDFEIPMVCAEGHFIVCTLADRCDSKGLNTDQRLQRVAEVLGRVLGCFESKSPQTAECNHNETARGSTSSLTESDGSMDHDILSHLLTVPSTELFSEGALTPASGSMPQSPLLTPRTSHAESQLTKHKAFVELENFQQVESLMTIARGIERIKNSEYNSLEDLSSYLEDLNAVIDTRKVDALVVETFGRRIAKLLQEKFIQLCGQIEDSNTDSLGSIDEDGPMESSVSSRTSQMNGKFKDRTSIEDFEIIKPISRGAFGRVFLAKKRVTGDLFAIKVLKKADMIRKNAVESILAERDILISARNPFVVRFFYSFTCRENLYLVMEYLNGGDLYSLLRNLGCLDEDMARTYMAELVLALEYLHSMNVIHRDLKPDNLLISRDGHIKLTDFGLSKVGLINSTDDLSGPDVSNVLVGDHQPADAEQRAQKREQRQKQAAVGTPDYLAPEILLGMTHGPTADWWSVGVILFELLVGIPPFNAEHPQIIFDNIMNREIPWPQVPEELSFEAYDLIDKLLIENPVQRLGATGAGEVKAHPFFKDINWDMIARQQAAFIPSTDDEYDTSYFACRHTWDDQVNVASNDYDDRSETSSMSCGSSPHSCDYEEDADEFGSMEEFGAPSLSVKYSFSNFSFKNISQLASMNYDLITKHNEDPLQSSKS</aaseq>

Gene Sequence

<dnaseqindica>1..6#108..1487#1594..1716#1860..2032#2196..2436#2795..2887#2956..3096#3222..3314#3497..3701#3857..3942#4396..4484#4633..4684#4762..4818#4910..5077#5183..5263#5346..5426#ATGGAGGTAAGGTGACGAGATGGGTGTTGGGTGTTTGCGATCGCGGGGTTGGTGGTGGATGCAGATGAGGTGTTCGATGTAACGCCGGGTGGTTTTGTTTGGTGCAGCAGAAGGACAGCGGCGGCGGCGGCGGTGGGTTGGCGCGGCGGTTGATGCTGGATGCGAGCGGGAGGGAGATGGACTCGCCGCGGTTCAGGGCGATCCTGCGGGCGACGAGCGGGCGGCGGAAGCGGGCGCCCGACGTGAAGAGCTTCTCGCACGAGCTCAACATTCGCGGGCCGCTCCTCCACCCGCTGCAGCAGCGGAAGCCGCGCGGGTGCGTGAACAGCCCGGAGGAGTTCATCGGCGCCATCAGGACAAAGTTCATCAGGCTCAAGGAGGAGGTCGACGCCGAGCTCGGGGTGTTCGCCGGGGACCTCGTCGGCGCGCTCGACAAGGCCGACGGGGACGAGGAGCGCGTCGCGCTCGAGGACCTGCTCGTCGTCGCGCAGCGGTGCGCCGAGATGAGCCCCGAGGAGCTCTGGGTCAAGTGCGAGTGCATCGTCCAGGGCCTCGACGACCGCCGCCAGGAGCTCACCGCCGGCGTCCTCAAGCAGGCGCACACCCGCGTCCTCTTCATCCTCACGCGCTGCACCCGCCTCCTCCAGTTCCGCAAGGAAGGCGGCGGATACGTCGCCGCCGACGACAAGCAGCACGTCCTCAGCCTGCACCAGCTCAGCGACCTCGGCCTCTACCCCTTCAAGGTCGCCGGCGGCTCCAGCGAGCTCGGCCGCAAGAGCACCTCCAGCTTGACCGAGCTCAAGGAGAGGCTCATCAGGCGGAGGATGCTGGAGCACAAGCAACTCACCCTCGACTTCTCGGCGGGCCGTGTCATTTCGTCAGACACCGGCGGCGATTCCCCGGGCAGCGGCGGCAAGATCTCATCCTGGAAGAAGCTTCCATCCCCTGCCGAGAAGACCCTGCACAAGGTTACGGAACCGACAACGGAGGAGAAGACCACCCCTACAAAGAAGAAGGCCATTACGAGGAACAAGGTCGCCGTGGATGAGATCGTCGAGAGGATTGACGCGGCTAGCATTCACCCCGACGGATTGTCATATCTTGGGGACTCTGCTGTGAAGCTCGAGGTTCCATCTGGGTTCCCAGAGGCTCAGCAGATCATCGTCGACGGGAAGCCGAGGATGATATGCAGGATCTGTGACTTTGAGATCCCCATGGTATGCGCAGAAGGGCACTTCATAGTGTGCACATTAGCTGATCGGTGTGATTCCAAGGGCCTGAATACGGACCAGCGGCTGCAGAGGGTTGCCGAGGTGCTCGGGAGGGTTTTGGGTTGCTTTGAATCGAAGAGCCCGCAAACTGCAGAATGTAATCATAATGAGACTGCAAGAGGTAGCACGTCGAGTTTAACGGAATCCGATGGATCCATGGATCATGATATTCTGTCTCATCTGTTGACAGTGCCATCGACAGAGTTGTTTTCAGAGGTAGTTGCCTCTTCTTCCTCAAACAATAGTATCCTTCGAAGAAACAATTATAACTGCTCTGTTTTGATCATATGGATTGTGGACATTTTGCTGGTGAAATTGGCAGGGAGCACTCACACCAGCGTCAGGCAGCATGCCACAGTCACCATTGCTGACACCAAGAACTAGCCACGCAGAGTCACAGCTGACTAAACACAAGGCATTCGTGGAACTAGAGAACTTTCAGCAGGTTTGTGCATATCAACTTAATACTGATCCTTGTTTCATTAAATTCTGTTCTTGTCAGAATGTTAGTTGGAACATTATTCTTTTGAGGTTATGTTAAATTTTGCTTCTTCAGTGATCTAGACTGGTAGTTTACCATACTGGCAGGTTGAAAGCTTAATGACTATTGCTAGAGGCATCGAGAGAATAAAAAACTCTGAGTACAACTCGCTTGAGGACTTGAGCTCTTATCTAGAAGATCTAAATGCTGTCATTGACACAAGAAAAGTGGATGCCCTTGTTGTGGAGACATTTGGAAGAAGGATAGCTAAATTACTACAGTAAGTGCAATGCCAGTTTAATTGTTTTACATGTGTTTGTGCCCCTTAGCATCTTCAGATTTATTTGTCCTTAGCAGCGATATACGCATTGCTGTTTCATTACTCAAATTACACTACCTGAAAATATAGCCCTGAGTGTCTCGTTAACATTATGGCTTCTCAGGGAGAAATTTATTCAACTATGCGGACAAATAGAGGACTCAAACACTGATTCATTAGGTTCAATAGACGAAGATGGTCCTATGGAGAGTAGTGTAAGCTCGAGAACAAGCCAGATGAATGGTAAATTCAAAGATCGTACCTCAATTGAGGACTTTGAAATTATAAAGCCAATCAGCCGTGGTGCATTTGGGCGTGTGTTTCTTGCAAAGAAAAGGGTAACAGGAGACCTTTTTGCCATCAAGGTAATGGTCATTACACTGGGCCTTCAGATTCTTATTTGTGCCAATGTAGTAGTGTCCTTCTGGATCAAGTGCAATAAGAGTATAAACTTAAAAATAATCAATTTTGGCTTTTTAATTCTCCTTCTGTTGAGAAAAGGAAAGTGTTTGAGATCCTTTTAGTGTGAATTTTGAATTTTGATGAAACTAAATGGATGCTTTGCTTCAAGATTATTAGAGAACTCTTCAAATGAATAGACTAGGATAATTCGCCGGCCCGGCGAAAAAGAATAGACTAGGATAAAAAAAATATAGCACTTACATAATTGAATTGCTAGCTTCAGTGGTGGCTTTTATCCTGATGGTTTCATCTTGAATCCAGGTGCTCAAAAAGGCTGATATGATCCGCAAGAATGCAGTGGAAAGCATCTTGGCAGAACGTGATATCTTAATATCAGCTCGCAACCCATTTGTGGTAAGTACTTCGAATGTTAAGTAAAATGAAATATTGGATTTCATTTAACTTCAATCTGTAATGGACAGGTTCGATTTTTCTACTCCTTCACATGTAGGGAAAACCTTTATCTTGTTATGGAGTACTTGAATGGAGGAGATCTGTATTCCCTCTTGAGAAACCTAGGTTGTTTAGATGAAGATATGGCAAGGACGTATATGGCTGAACTTGTAAGTTATGAGTGTCTTTTATTTCCTGAAAGTATTTTACAAACAACTAAATCAGAAAGGTCCATCCTTAGCCATTCCTTTATTTTAAAAGTTTTAATCGTAGGCATTTTTATTTCTATCTGTAGGTTCTTGCTTTGGAGTATCTGCATTCTATGAATGTGATTCATCGTGATTTGAAGCCCGATAACCTTTTGATCTCCCGTGATGGCCATATAAAGGTAATACTACCTTCTTATTTCTTTTCTTTCAATACCTATTACCTATTAGGTTCTTATGTGTTTAGTGTTGTTATCGGTGACTGATGATTAGATTGTCTGAGGAAAATTGTTGCTGTACTTTCAAGTCTTATAAGTATTTTTTTCATGCAATAGAATGAAGGCGGTTGTCTATTTCCGTGCAGTTGACTGATTTTGGGCTATCAAAAGTTGGTCTTATCAATAGCACCGATGATTTGTCTGGTCCAGATGTCAGCAATGTTCTTGTTGGTGATCATCAACCTGCAGATGCAGAACAACGTGCACAAAAGCGAGAGCAAAGGCAAAAACAGGCAGCTGTGGGTACTCCAGACTATTTGGCCCCTGAGATACTGCTAGGGATGACCCATGGTCTGTTTGCATCTTTTTCGTAGAACTTACATTTACTTTAAAATGTTTAAGTCAGTACTTTAGGGTGTTGAATTTATTACATATAACTTATGTTTACCTTCATCGAAAAGTGAAAATGCATCTTCTATTAAAATATATGGCACTCTTACATGCAGGTCCAACTGCAGATTGGTGGTCAGTTGGCGTCATTCTCTTTGAGCTTCTTGTGGGAATTCCTCCATTCAACGCTGAGCATCCGCAGGTAGTCTTCTATCCTCTCTAAGGCTCTGTTCTATTTCTTCAATTCCAACTTCAACTTCCTCGTTAAATGATGTATTTTTGACAAAAAGTTTCTATATAGAAGTTGTTTTAAAAAGCAAATAAATCCATTTTTTAATTTTTTACAATAATTAATACTTAATTAATTAGGTGCTAATGAGCTTTCTTGTTTTGAGTGCGCCAAAAATATCTCTCCCAAGTCAGGGAACGAACGGGGCATGTTTGATAATATAGTGACAAGCTGGCTCTAACTAATTTGTTGGTACTACTAACATGTTGGTTGTCTGTTGGAACCATTCTAAGAGAGAGAATTTATTTACTGAAGAAGACGAATATTAGTTAGAGCCAGTTTGTCATTTAATTACTCCAATGTCTCGATGCTTATGGTCTATCAAAGGTCTTCCAGCAGTAACATAACAATGTTGTTTATTTACAGATAATATTTGATAATATAATGAATCGGGAAATACCTTGGCCACAAGTACCAGAGGAACTGAGTTTCGAAGCATATGACTTGATTGACAAGTAAGTCAGAAAATTATTATTTTGGAAATAATTGCTATCAACCGTTTATTTCTGTTCATCGGTATTTCTTGGTGAATCTGTAGTGTTAAATGTCCAACAAATCTGCATTCTACAGATGCTATTTTAACTCAGTTAACTTTCATGTCAGGTTGCTAATTGAAAACCCTGTACAAAGATTAGGAGCAACTGGTGCTGGAGAGGTACTCGTTTTCCTTTTTCGTATTCCAGTTATACCTCTTATGTACACACCACTAACTGACATATGCTATTAGAGCAGGTAAAGGCTCATCCTTTCTTCAAAGATATAAATTGGGATATGATTGCCAGACAACAGGTTAGAAGCTAAACTAATGGGCAGTCTGAAAAACAGGAACCTCAAAAAACTGCCTCCAAAGAAGTTTCTGAACTGGATTCAATTTTTGTAGGCTGCATTTATTCCTTCTACAGATGATGAATATGATACAAGTTATTTTGCCTGTCGTCACACATGGGACGACCAAGTGAATGTAGCCTCTAACGACTACGACGATAGAAGTGAAACTAGTAGCATGAGTTGTGGCAGTAGTCCACACAGTTGTGATTATGAGGAAGATGTATGCTAGATCAATCCCTCTAAAATCCCCCTTCTGATTTAGACATCCAAATCATTATGTAGCCCACACCTCATACCTCTAACCTTTTCTAAAAAACATTAACAGGCGGATGAATTTGGTAGCATGGAAGAATTCGGAGCTCCATCACTGTCAGTGAAATATTCTTTCAGCAATTTCTCATTCAAGGTAACCCTCACCTGAAGTTCCCACGATATTTGAATCTTTTTCTCGGTTAGTAAGTTTTTTTTTTCTTTTCCTTTGTAAACAGAACATTTCTCAGTTAGCATCCATGAACTATGATCTGATCACAAAGCATAACGAGGATCCCCTACAGTCTTCAAAATCTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA037819