Os01g0102950

From RiceWiki
Revision as of 04:15, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0102950| Description = Snf7 family protein| Version = NM_001185188.1 GI:297719510 GeneID:9266052| Length = 2347 bp| Definition = Oryza sat...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os01g0102950

Description

Snf7 family protein

Version

NM_001185188.1 GI:297719510 GeneID:9266052

Length

2347 bp

Definition

Oryza sativa Japonica Group Os01g0102950, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:169798..172144

Sequence Coding Region

170045..170095,170406..170554,170764..170875,171398..171469,171578..171671
,171770..171921,172004..172072

Expression

GEO Profiles:Os01g0102950

Genome Context

<gbrowseImage1> name=NC_008394:169798..172144 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:169798..172144 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaagaagatctttggagccaagaagagcaaggacccgcccccatccatccaggacgctaccgaacgaatcaacaagaggggggagagcgtggacgacaagatcaagaagctggacgaagagctcggccgttacaaggagcagatcaggaagacacgccctggaccctcccaggacgccattaaggcccgcgccatcaggcttctcaagcacaagcgcatgtacgaagaacagcgcaacatgctctacaaccagacctataatctcgaccaagtcgctttcgctgccgatggcctcaaagacgctcagcagaccatgaatgccatgaaggccgccaataaagagctcaagggaatgatgaagacagtcaagattgaggacatcgataatatgcaagatgaaatgactgacctgatggatgtgagcaacgaaatacaagaatcccttggtagaagctacaacatccctgacgatgttgatgaggaagaactaatgggagaactggatgctttggaggctgatatggagtttgagtcaagtgcagtcccatcgtatcttcaaccagacaaggaatccgatttcgatgcagagcttaatttgccagctgcacctaccgctcctgcagcagtcccagtaagcaggcagcaggtggatgagctaggattgccagcagtccctcgagcatcaatccgcagttag</cdnaseq>

Protein Sequence

<aaseq>MKKIFGAKKSKDPPPSIQDATERINKRGESVDDKIKKLDEELGR YKEQIRKTRPGPSQDAIKARAIRLLKHKRMYEEQRNMLYNQTYNLDQVAFAADGLKDA QQTMNAMKAANKELKGMMKTVKIEDIDNMQDEMTDLMDVSNEIQESLGRSYNIPDDVD EEELMGELDALEADMEFESSAVPSYLQPDKESDFDAELNLPAAPTAPAAVPVSRQQVD ELGLPAVPRASIRS</aaseq>

Gene Sequence

<dnaseqindica>2050..2100#1591..1739#1270..1381#676..747#474..567#224..375#73..141#actcccaacactctctctcctcgctgccgctgccgccgccgccgccgccgccgccgcacacacgcgccggaaatgaagaagatctttggagccaagaagagcaaggacccgcccccatccatccaggacgctaccgaacgagtattctcctcgtctaggccatttgctcgcacgccatctctcttagtttgaacatttcctctctatgtgtatgtgattgaagatcaacaagaggggggagagcgtggacgacaagatcaagaagctggacgaagagctcggccgttacaaggagcagatcaggaagacacgccctggaccctcccaggacgccattaaggcccgcgccatcaggcttctcaagcacaagcgcatgtactctactctactcttactcactattctactactagtagagtatttgctactactccactatgcaactctgatgaatgtacgttgcctgtttcaaggtacgaagaacagcgcaacatgctctacaaccagacctataatctcgaccaagtcgctttcgctgccgatggcctcaaagacgctcagcagaccgtacgtactactccacatatatagcccgccttgtttgttcctactgtctccatgtctatgaattattgccgaaccattcttttgtttgttaatttatcgattcctcagatgaatgccatgaaggccgccaataaagagctcaagggaatgatgaagacagtcaagattgaggacatcgatgtatgcttctctttctctttagttgctacttactacagctaccttaccaagatattccttcctcatgtgcatttctttatcaggtgctaccatttgagctgtccccatcctgtgttttgtatcatgcccattccttgaaaaaaacttgctgtcaaatcttttcttttttatatattgaaagggaaaaacctgcttatagatttttcataaccatgcaaacagaccaattgttctctcaaggacaattgctccagtgcagatattttattgggcattgcattcctagtttcagacgctatccttcattacatttcaagctaatctgcaggatttgcctattgtttagatcatcaacacattttacaccagtatatccattgatttacaagaaaaccatacaaaaaccacaattgtcaatcttttttaagtgcggttatcaaccgcccttgaaattgcttgttggactatcttgagtattatcatcttttttcgcgtaaaacgaatgccctgatccacctgtagaatatgcaagatgaaatgactgacctgatggatgtgagcaacgaaatacaagaatcccttggtagaagctacaacatccctgacgatgttgatgaggaagaactaatgggaggtatggacgctgtaccatcagttggccaattggaaaatgatggttggcaatttacttggcattattgtcattcataggcatctggaagtaataacatagattcatgccataaattgcctagcttgttgccatgccttcattcttcctgggaccattgcagggctggagataataatctatctactgtcgttgtttcttgaacattgcagaactggatgctttggaggctgatatggagtttgagtcaagtgcagtcccatcgtatcttcaaccagacaaggaatccgatttcgatgcagagcttaatttgccagctgcacctaccgctcctgcagcagtcccagtaagcaggcagcaggttagtttatattattgttatttttattcagatgcttgctttgtcatgatgattcgagaactatctagtcccatgtatgtactagaggaatgaatgatgaattttcctttccttttttcttaagaagttgttattcatgagttagcagtgtctgttgttcactatcccaagttcaaatattcttgcatagactaggtgcattgttgatcaacagctaaaacaaccatgttttgtatgaaccaattagattggtccgtagtttacctgttttaagcttgtactgaatgttgcctggtgctatctggtgcaggtggatgagctaggattgccagcagtccctcgagcatcaatccgcagttagaacagtaattcatgtacctttgcttgtgattggcattgacgtgagaacccattgctatgcaattgcagttgaacaattaatctgtgtatgtgtttctcttcatgagtcgccttgatttgttaaaccgagcttgcagtcttatatcttccactctgccttttagaaaaggggatttcgagttgtgatgggttgaggttgattagatgcatcatatgatgctttgtcggtggtggtggttctttcaatt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0102950, RefSeq:Os01g0102950