Os01g0117900

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Revision as of 04:18, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0117900| Description = Nodulin-like protein 5NG4| Version = NM_001048391.1 GI:115434195 GeneID:4326073| Length = 2137 bp| Definition = Ory...")
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Gene Name

Os01g0117900

Description

Nodulin-like protein 5NG4

Version

NM_001048391.1 GI:115434195 GeneID:4326073

Length

2137 bp

Definition

Oryza sativa Japonica Group Os01g0117900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:1009267..1011403

Sequence Coding Region

1009362..1009567,1009686..1009748,1009843..1009959,1010089..1010317,1010427..1010585
,1010680..1010831,1010937..1011135

Expression

GEO Profiles:Os01g0117900

Genome Context

<gbrowseImage1> name=NC_008394:1009267..1011403 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:1009267..1011403 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggagggatcaggcagctgcagcagtgatgcatgagaaggtgaagctgttcataggagtgctggccctgcagttcctgcttgcaggattccacattgtgagcagggcagcactcaacatgggcatcagcaagattgtgttcatcgtctataggaacctcatctccctcgccttgctcgcgcccttcgcctacttcctcgagaagaaagatagaccaccactgaccttctctttgctggtggagttttttcttctagcactgtgtgggataactgcaaaccaaggtttctacctcctagggctgtatcacctttcaccaacttatgcttctgcaatacagaacacagttcctgccatcacctttgccatggctgccgtcctcaggcttgagcaagtagacctaggcaagaggcatggggtggccaaggtggtgggcacggtggtgagcataggtggtgccacagtgataactctctacaagggcctaccactgttcaatcacaatctgaacatcaagtccctgtcttcctcgagcctcatcctcaactggactctgggctgcgtcttcatccttggccactgcctctcatggtctggatggatggttcttcaggtgccagttctgaagaggtacccagctaggctgtcagttctatcactgacctgcatctttgggctcctccagttcctggtcattgcagccttcactgaagaagacctgagcagatggaaggtgaactccggaagcgagctgttcacaatcctctacgctggtcttgtggcatctggcgtggcgtttgctctgcagatatggtgcatcgacaggggagggccgctgttcaccgccgtgttccagccggtccagaccgtcgccgtcgccgtcatggccgccatcattctcggagatcagctatactcaggagggatcatcggagcagttctgattgtgatcgggctgtacttcgtgctgtggggcaaaagcgaggagaagaagagcaagaacaacaacctgcaggaccagccggtgcagggaggaggagacgacatcaggaggcatctgctcggacaagaagatgcatctcgcaaagacgaagaagctgcagtcactgatgaactggcatga</cdnaseq>

Protein Sequence

<aaseq>MGRDQAAAAVMHEKVKLFIGVLALQFLLAGFHIVSRAALNMGIS KIVFIVYRNLISLALLAPFAYFLEKKDRPPLTFSLLVEFFLLALCGITANQGFYLLGL YHLSPTYASAIQNTVPAITFAMAAVLRLEQVDLGKRHGVAKVVGTVVSIGGATVITLY KGLPLFNHNLNIKSLSSSSLILNWTLGCVFILGHCLSWSGWMVLQVPVLKRYPARLSV LSLTCIFGLLQFLVIAAFTEEDLSRWKVNSGSELFTILYAGLVASGVAFALQIWCIDR GGPLFTAVFQPVQTVAVAVMAAIILGDQLYSGGIIGAVLIVIGLYFVLWGKSEEKKSK NNNLQDQPVQGGGDDIRRHLLGQEDASRKDEEAAVTDELA</aaseq>

Gene Sequence

<dnaseqindica>96..301#420..482#577..693#823..1051#1161..1319#1414..1565#1671..1869#aagcaacagcttagctagtaacagtaggccactactagcatcactgcatttctagttaagtaacaacactagagagagtaaggagtagtgagaccatggggagggatcaggcagctgcagcagtgatgcatgagaaggtgaagctgttcataggagtgctggccctgcagttcctgcttgcaggattccacattgtgagcagggcagcactcaacatgggcatcagcaagattgtgttcatcgtctataggaacctcatctccctcgccttgctcgcgcccttcgcctacttcctcgagaagtgcgtaaataaaccccttctttttttacataaaaattaatcagttgtttcatttttctcaaaagtatatataagctgttgttgattgtacatttttttcatgtatgatctctatcaggaaagatagaccaccactgaccttctctttgctggtggagttttttcttctagcactgtgtgggtaagtagattgatttcttttaccatcttctctgctctatatatatccatatttactcggactgaagtttctgaatctctgtaccattgttcaggataactgcaaaccaaggtttctacctcctagggctgtatcacctttcaccaacttatgcttctgcaatacagaacacagttcctgccatcacctttgccatggctgccgtcctcaggtatatatcacttaatttatacaccgaagaaatataagatcagtgtaaagatatatattagtaacatacatgcatgtagttttgagttttcactgcagattaaactgtacgtgtgttgtgtgcatgcaggcttgagcaagtagacctaggcaagaggcatggggtggccaaggtggtgggcacggtggtgagcataggtggtgccacagtgataactctctacaagggcctaccactgttcaatcacaatctgaacatcaagtccctgtcttcctcgagcctcatcctcaactggactctgggctgcgtcttcatccttggccactgcctctcatggtctggatggatggttcttcaggtagatggctagtctctcatgcatgcgcattggatcgatggctatgatttgctgaatgtctgaactaacttttcatggtgtatttgaatcttgtttgttttgtcgttaggtgccagttctgaagaggtacccagctaggctgtcagttctatcactgacctgcatctttgggctcctccagttcctggtcattgcagccttcactgaagaagacctgagcagatggaaggtgaactccggaagcgagctgttcacaatcctctacgctgtaagtgcatagctgcaacataccgtcttcgagatctatatatgaaaaatcatgagaaattaatagaatgacgtttctttttggtgcttgctagggtcttgtggcatctggcgtggcgtttgctctgcagatatggtgcatcgacaggggagggccgctgttcaccgccgtgttccagccggtccagaccgtcgccgtcgccgtcatggccgccatcattctcggagatcagctatactcaggagggtaagatgattacacacaaagttcagtaaaaaaaagtgcattcctttaattctctgaatttatctcatcgattgatcgctggactgtaaaaattatcattggcaggatcatcggagcagttctgattgtgatcgggctgtacttcgtgctgtggggcaaaagcgaggagaagaagagcaagaacaacaacctgcaggaccagccggtgcagggaggaggagacgacatcaggaggcatctgctcggacaagaagatgcatctcgcaaagacgaagaagctgcagtcactgatgaactggcatgacgatcgatcgaaggggcgttcttcaccagtaatatgcatgatgatgttggagttggaaaatatgttgatgtcagtgactgtactttcttaactatattaatcaaagaagaagatccaagcgtgccagtgtaattaaaaacagtactgctagctggtcctcactcaccagtgatatactatatataattgctacgaatcagtctgtgtatatctcaagctgtatattcagagttaatgatataatattgccatcacttgaacaattagc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0117900, RefSeq:Os01g0117900